RNA–Protein interactions for RNA: ENST00000389328.8

TRAPPC9-201, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2 BASIC

Gene TRAPPC9, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-201ENST00000389328 THAP3Q8WTV1 239 aaPredicted RBP12.11□□□□□ -0.47
TRAPPC9-201ENST00000389328 MARC2Q969Z3 335 aa12.11□□□□□ -0.47
TRAPPC9-201ENST00000389328 TSSK2Q96PF2 358 aa12.11□□□□□ -0.47
TRAPPC9-201ENST00000389328 PPP1R3EQ9H7J1 279 aa12.11□□□□□ -0.47
TRAPPC9-201ENST00000389328 FANCFQ9NPI8 374 aa12.11□□□□□ -0.47
TRAPPC9-201ENST00000389328 KIF25Q9UIL4 384 aa12.11□□□□□ -0.47
TRAPPC9-201ENST00000389328 FITM1A5D6W6 292 aa12.11□□□□□ -0.47
TRAPPC9-201ENST00000389328 GGT3PA6NGU5 568 aa12.11□□□□□ -0.47
TRAPPC9-201ENST00000389328 HTR3BO95264 441 aa12.11□□□□□ -0.47
TRAPPC9-201ENST00000389328 MAOAP21397 527 aa12.11□□□□□ -0.47
TRAPPC9-201ENST00000389328 CST5P28325 142 aaPredicted RBP12.11□□□□□ -0.47
TRAPPC9-201ENST00000389328 SELENOPP49908 381 aa12.11□□□□□ -0.47
TRAPPC9-201ENST00000389328 ALKBH1Q13686 389 aaKnown RBP12.11□□□□□ -0.47
TRAPPC9-201ENST00000389328 MPEG1Q2M385 716 aa12.11□□□□□ -0.47
TRAPPC9-201ENST00000389328 SFRP5Q5T4F7 317 aa12.11□□□□□ -0.47
TRAPPC9-201ENST00000389328 ADIPOR2Q86V24 386 aa12.11□□□□□ -0.47
TRAPPC9-201ENST00000389328 LINC00052Q96N35 136 aa12.11□□□□□ -0.47
TRAPPC9-201ENST00000389328 GPA33Q99795 319 aa12.11□□□□□ -0.47
TRAPPC9-201ENST00000389328 POFUT1Q9H488 388 aa12.11□□□□□ -0.47
TRAPPC9-201ENST00000389328 CCDC88CQ9P219 2028 aa12.11□□□□□ -0.47
TRAPPC9-201ENST00000389328 LSM5Q9Y4Y9 91 aaKnown RBP12.11□□□□□ -0.47
TRAPPC9-201ENST00000389328 DOCK1Q14185 1865 aa12.11□□□□□ -0.47
TRAPPC9-201ENST00000389328 BORCS7-ASMTA0A0B4J1R7 106 aa12.11□□□□□ -0.47
TRAPPC9-201ENST00000389328 AIPO00170 330 aa12.11□□□□□ -0.47
TRAPPC9-201ENST00000389328 HOXB5P09067 269 aa12.11□□□□□ -0.47
TRAPPC9-201ENST00000389328 GAAP10253 952 aa12.11□□□□□ -0.47
TRAPPC9-201ENST00000389328 NID1P14543 1247 aa12.11□□□□□ -0.47
TRAPPC9-201ENST00000389328 CBR1P16152 277 aa12.11□□□□□ -0.47
TRAPPC9-201ENST00000389328 RAB6AP20340 208 aa12.11□□□□□ -0.47
TRAPPC9-201ENST00000389328 MAGEB1P43366 347 aa12.11□□□□□ -0.47
TRAPPC9-201ENST00000389328 PEA15Q15121 130 aa12.11□□□□□ -0.47
TRAPPC9-201ENST00000389328 Q5BKY6 102 aa12.11□□□□□ -0.47
TRAPPC9-201ENST00000389328 OTPQ5XKR4 325 aa12.11□□□□□ -0.47
TRAPPC9-201ENST00000389328 H3F3CQ6NXT2 135 aa12.11□□□□□ -0.47
TRAPPC9-201ENST00000389328 Q6ZNB5 142 aa12.11□□□□□ -0.47
TRAPPC9-201ENST00000389328 MFSD9Q8NBP5 474 aa12.11□□□□□ -0.47
TRAPPC9-201ENST00000389328 TRAF4Q9BUZ4 470 aaPredicted RBP12.11□□□□□ -0.47
TRAPPC9-201ENST00000389328 ACKR4Q9NPB9 350 aa12.11□□□□□ -0.47
TRAPPC9-201ENST00000389328 FBXL4Q9UKA2 621 aa12.11□□□□□ -0.47
TRAPPC9-201ENST00000389328 TLX3O43711 291 aaPredicted RBP12.1□□□□□ -0.47
TRAPPC9-201ENST00000389328 HPXP02790 462 aa12.1□□□□□ -0.47
TRAPPC9-201ENST00000389328 CAMLGP49069 296 aa12.1□□□□□ -0.47
TRAPPC9-201ENST00000389328 METAP1P53582 386 aa12.1□□□□□ -0.47
TRAPPC9-201ENST00000389328 LGALSLQ3ZCW2 172 aaPredicted RBP12.1□□□□□ -0.47
TRAPPC9-201ENST00000389328 PLEKHN1Q494U1 663 aaPredicted RBP12.1□□□□□ -0.47
TRAPPC9-201ENST00000389328 ZNF765Q7L2R6 523 aa12.1□□□□□ -0.47
TRAPPC9-201ENST00000389328 RAB11FIP2Q7L804 512 aa12.1□□□□□ -0.47
TRAPPC9-201ENST00000389328 MAMDC2Q7Z304 686 aaPredicted RBP12.1□□□□□ -0.47
TRAPPC9-201ENST00000389328 DGLUCYQ7Z3D6 616 aa12.1□□□□□ -0.47
TRAPPC9-201ENST00000389328 OR2AK2Q8NG84 335 aa12.1□□□□□ -0.47
TRAPPC9-201ENST00000389328 OR5T2Q8NGG2 359 aa12.1□□□□□ -0.47
TRAPPC9-201ENST00000389328 OR5H2Q8NGV7 314 aa12.1□□□□□ -0.47
TRAPPC9-201ENST00000389328 NPRL2Q8WTW4 380 aa12.1□□□□□ -0.47
TRAPPC9-201ENST00000389328 FAM3DQ96BQ1 224 aa12.1□□□□□ -0.47
TRAPPC9-201ENST00000389328 WDR89Q96FK6 387 aaPredicted RBP12.1□□□□□ -0.47
TRAPPC9-201ENST00000389328 PRMT8Q9NR22 394 aaPredicted RBP12.1□□□□□ -0.47
TRAPPC9-201ENST00000389328 PYCARD-AS1I3L0S3 204 aa12.1□□□□□ -0.47
TRAPPC9-201ENST00000389328 CTSLP07711 333 aa12.1□□□□□ -0.47
TRAPPC9-201ENST00000389328 SMAD2Q15796 467 aaKnown RBP12.1□□□□□ -0.47
TRAPPC9-201ENST00000389328 SPIN3Q5JUX0 258 aa12.1□□□□□ -0.47
TRAPPC9-201ENST00000389328 AADACL4Q5VUY2 407 aa12.1□□□□□ -0.47
TRAPPC9-201ENST00000389328 PRAMEF8Q5VWM4 474 aa12.1□□□□□ -0.47
TRAPPC9-201ENST00000389328 PRAMEF7Q5VXH5 474 aa12.1□□□□□ -0.47
TRAPPC9-201ENST00000389328 METRNLQ641Q3 311 aa12.1□□□□□ -0.47
TRAPPC9-201ENST00000389328 GPR139Q6DWJ6 353 aa12.1□□□□□ -0.47
TRAPPC9-201ENST00000389328 ESX1Q8N693 406 aa12.1□□□□□ -0.47
TRAPPC9-201ENST00000389328 ZC3HAV1LQ96H79 300 aaKnown RBP12.1□□□□□ -0.47
TRAPPC9-201ENST00000389328 ELF4Q99607 663 aaPredicted RBP12.1□□□□□ -0.47
TRAPPC9-201ENST00000389328 ST6GALNAC5Q9BVH7 336 aa12.1□□□□□ -0.47
TRAPPC9-201ENST00000389328 MS4A7Q9GZW8 240 aaPredicted RBP12.1□□□□□ -0.47
TRAPPC9-201ENST00000389328 SPHK1Q9NYA1 384 aa12.1□□□□□ -0.47
TRAPPC9-201ENST00000389328 TCRBV16S1A1N1A0A5B0 115 aa12.1□□□□□ -0.47
TRAPPC9-201ENST00000389328 RHPN2P1A8MT19 583 aa12.1□□□□□ -0.47
TRAPPC9-201ENST00000389328 ITGB8P26012 769 aa12.1□□□□□ -0.47
TRAPPC9-201ENST00000389328 SOX9P48436 509 aa12.1□□□□□ -0.47
TRAPPC9-201ENST00000389328 PPT1P50897 306 aa12.1□□□□□ -0.47
TRAPPC9-201ENST00000389328 GPNMBQ14956 572 aa12.1□□□□□ -0.47
TRAPPC9-201ENST00000389328 RHEBQ15382 184 aa12.1□□□□□ -0.47
TRAPPC9-201ENST00000389328 ZNF529Q6P280 563 aa12.1□□□□□ -0.47
TRAPPC9-201ENST00000389328 ZNF440Q8IYI8 595 aa12.1□□□□□ -0.47
TRAPPC9-201ENST00000389328 ZNF687Q8N1G0 1237 aa12.1□□□□□ -0.47
TRAPPC9-201ENST00000389328 EID2Q8N6I1 236 aa12.1□□□□□ -0.47
TRAPPC9-201ENST00000389328 OR4D9Q8NGE8 314 aa12.1□□□□□ -0.47
TRAPPC9-201ENST00000389328 OR9A4Q8NGU2 314 aa12.1□□□□□ -0.47
TRAPPC9-201ENST00000389328 ELP5Q8TE02 316 aa12.1□□□□□ -0.47
TRAPPC9-201ENST00000389328 URM1Q9BTM9 101 aaKnown RBP12.1□□□□□ -0.47
TRAPPC9-201ENST00000389328 APOOQ9BUR5 198 aa12.1□□□□□ -0.47
TRAPPC9-201ENST00000389328 OR52A5Q9H2C5 316 aa12.1□□□□□ -0.47
TRAPPC9-201ENST00000389328 TMEM231Q9H6L2 316 aa12.1□□□□□ -0.47
TRAPPC9-201ENST00000389328 LSM2Q9Y333 95 aaKnown RBP12.1□□□□□ -0.47
TRAPPC9-201ENST00000389328 SERTM1A2A2V5 107 aa12.09□□□□□ -0.47
TRAPPC9-201ENST00000389328 SYT7O43581 403 aa12.09□□□□□ -0.47
TRAPPC9-201ENST00000389328 ZNF254O75437 659 aa12.09□□□□□ -0.47
TRAPPC9-201ENST00000389328 CDONQ4KMG0 1287 aa12.09□□□□□ -0.47
TRAPPC9-201ENST00000389328 GLYATL3Q5SZD4 288 aa12.09□□□□□ -0.47
TRAPPC9-201ENST00000389328 CARD17Q5XLA6 110 aa12.09□□□□□ -0.47
TRAPPC9-201ENST00000389328 NHLRC1Q6VVB1 395 aa12.09□□□□□ -0.47
TRAPPC9-201ENST00000389328 YIPF5Q969M3 257 aa12.09□□□□□ -0.47
TRAPPC9-201ENST00000389328 FBXW5Q969U6 566 aa12.09□□□□□ -0.47
TRAPPC9-201ENST00000389328 ADOQ96SZ5 270 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms