RNA–Protein interactions for RNA: ENST00000383738.6

CSPG5-202, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CSPG5, Length 4,161 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-202ENST00000383738 YOD1Q5VVQ6 348 aaPredicted RBP17.38■□□□□ 0.37
CSPG5-202ENST00000383738 CALHM3Q86XJ0 350 aa17.38■□□□□ 0.37
CSPG5-202ENST00000383738 LGALS14Q8TCE9 139 aa17.38■□□□□ 0.37
CSPG5-202ENST00000383738 COMMD4Q9H0A8 199 aa17.38■□□□□ 0.37
CSPG5-202ENST00000383738 ACSS1Q9NUB1 689 aaPredicted RBP17.38■□□□□ 0.37
CSPG5-202ENST00000383738 KLHL9Q9P2J3 617 aa17.38■□□□□ 0.37
CSPG5-202ENST00000383738 DIMT1Q9UNQ2 313 aaKnown RBP17.38■□□□□ 0.37
CSPG5-202ENST00000383738 MRPS2Q9Y399 296 aaKnown RBP17.38■□□□□ 0.37
CSPG5-202ENST00000383738 TLX3O43711 291 aaPredicted RBP17.38■□□□□ 0.37
CSPG5-202ENST00000383738 PEX14O75381 377 aa17.38■□□□□ 0.37
CSPG5-202ENST00000383738 TRAPPC2P0DI81 140 aa17.38■□□□□ 0.37
CSPG5-202ENST00000383738 TRAPPC2BP0DI82 140 aa17.38■□□□□ 0.37
CSPG5-202ENST00000383738 DNASE1L1P49184 302 aa17.38■□□□□ 0.37
CSPG5-202ENST00000383738 GK2Q14410 553 aaPredicted RBP17.38■□□□□ 0.37
CSPG5-202ENST00000383738 METTL11BQ5VVY1 283 aa17.38■□□□□ 0.37
CSPG5-202ENST00000383738 KDM8Q8N371 416 aa17.38■□□□□ 0.37
CSPG5-202ENST00000383738 PAQR8Q8TEZ7 354 aa17.38■□□□□ 0.37
CSPG5-202ENST00000383738 LDOC1O95751 146 aaPredicted RBP17.37■□□□□ 0.37
CSPG5-202ENST00000383738 EIF4EP06730 217 aaKnown RBP17.37■□□□□ 0.37
CSPG5-202ENST00000383738 SLC25A24Q6NUK1 477 aa17.37■□□□□ 0.37
CSPG5-202ENST00000383738 PAPD4Q6PIY7 484 aaKnown RBP17.37■□□□□ 0.37
CSPG5-202ENST00000383738 STX12Q86Y82 276 aa17.37■□□□□ 0.37
CSPG5-202ENST00000383738 OR7G2Q8NG99 324 aa17.37■□□□□ 0.37
CSPG5-202ENST00000383738 CD300LFQ8TDQ1 290 aa17.37■□□□□ 0.37
CSPG5-202ENST00000383738 NEK7Q8TDX7 302 aa17.37■□□□□ 0.37
CSPG5-202ENST00000383738 PDCD1LG2Q9BQ51 273 aa17.37■□□□□ 0.37
CSPG5-202ENST00000383738 METTL8Q9H825 291 aaKnown RBP17.37■□□□□ 0.37
CSPG5-202ENST00000383738 CKLFQ9UBR5 152 aa17.37■□□□□ 0.37
CSPG5-202ENST00000383738 SCGB1D2O95969 90 aa17.37■□□□□ 0.37
CSPG5-202ENST00000383738 BSGP35613 385 aa17.37■□□□□ 0.37
CSPG5-202ENST00000383738 FGL1Q08830 312 aa17.37■□□□□ 0.37
CSPG5-202ENST00000383738 CHAF1BQ13112 559 aa17.37■□□□□ 0.37
CSPG5-202ENST00000383738 SGCAQ16586 387 aa17.37■□□□□ 0.37
CSPG5-202ENST00000383738 LINC00471Q8N535 108 aa17.37■□□□□ 0.37
CSPG5-202ENST00000383738 STOML3Q8TAV4 291 aa17.37■□□□□ 0.37
CSPG5-202ENST00000383738 DVL3Q92997 716 aaPredicted RBP17.37■□□□□ 0.37
CSPG5-202ENST00000383738 BCL2L14Q9BZR8 327 aa17.37■□□□□ 0.37
CSPG5-202ENST00000383738 PDGFBP01127 241 aaPredicted RBP17.37■□□□□ 0.37
CSPG5-202ENST00000383738 AKR1C4P17516 323 aa17.37■□□□□ 0.37
CSPG5-202ENST00000383738 NLRC3Q7RTR2 1065 aa17.37■□□□□ 0.37
CSPG5-202ENST00000383738 TMEM239Q8WW34 195 aa17.37■□□□□ 0.37
CSPG5-202ENST00000383738 GABARAPL1Q9H0R8 117 aa17.37■□□□□ 0.37
CSPG5-202ENST00000383738 ISG20L2Q9H9L3 353 aaKnown RBP17.37■□□□□ 0.37
CSPG5-202ENST00000383738 FAM60AQ9NP50 221 aa17.37■□□□□ 0.37
CSPG5-202ENST00000383738 CBLCQ9ULV8 474 aa17.37■□□□□ 0.37
CSPG5-202ENST00000383738 IER3IP1Q9Y5U9 82 aa17.37■□□□□ 0.37
CSPG5-202ENST00000383738 V9GYH0 126 aa17.37■□□□□ 0.37
CSPG5-202ENST00000383738 IGHV1OR15-9A0A0B4J2B8 117 aa17.36■□□□□ 0.37
CSPG5-202ENST00000383738 TVP23AA6NH52 213 aa17.36■□□□□ 0.37
CSPG5-202ENST00000383738 DOK2O60496 412 aa17.36■□□□□ 0.37
CSPG5-202ENST00000383738 UBL4AP11441 157 aa17.36■□□□□ 0.37
CSPG5-202ENST00000383738 ZNF35P13682 527 aa17.36■□□□□ 0.37
CSPG5-202ENST00000383738 FUT1P19526 365 aa17.36■□□□□ 0.37
CSPG5-202ENST00000383738 PSMB1P20618 241 aaKnown RBP17.36■□□□□ 0.37
CSPG5-202ENST00000383738 CD79BP40259 229 aa17.36■□□□□ 0.37
CSPG5-202ENST00000383738 PRICKLE2Q7Z3G6 844 aa17.36■□□□□ 0.37
CSPG5-202ENST00000383738 ZNF619Q8N2I2 560 aa17.36■□□□□ 0.37
CSPG5-202ENST00000383738 MS4A15Q8N5U1 240 aa17.36■□□□□ 0.37
CSPG5-202ENST00000383738 TEX19Q8NA77 164 aa17.36■□□□□ 0.37
CSPG5-202ENST00000383738 OR56B4Q8NH76 319 aa17.36■□□□□ 0.37
CSPG5-202ENST00000383738 S100PBPQ96BU1 408 aa17.36■□□□□ 0.37
CSPG5-202ENST00000383738 OR10A5Q9H207 317 aa17.36■□□□□ 0.37
CSPG5-202ENST00000383738 AUNIPQ9H7T9 357 aa17.36■□□□□ 0.37
CSPG5-202ENST00000383738 hCG_1807616A0A1W2PRN6 198 aa17.36■□□□□ 0.37
CSPG5-202ENST00000383738 TP53I11O14683 189 aa17.36■□□□□ 0.37
CSPG5-202ENST00000383738 GMDSO60547 372 aa17.36■□□□□ 0.37
CSPG5-202ENST00000383738 KIAA0040Q15053 153 aa17.36■□□□□ 0.37
CSPG5-202ENST00000383738 LRFN4Q6PJG9 635 aa17.36■□□□□ 0.37
CSPG5-202ENST00000383738 ZNF793Q6ZN11 406 aa17.36■□□□□ 0.37
CSPG5-202ENST00000383738 PINK1Q9BXM7 581 aa17.36■□□□□ 0.37
CSPG5-202ENST00000383738 OR52D1Q9H346 318 aa17.36■□□□□ 0.37
CSPG5-202ENST00000383738 AMY2AP04746 511 aa17.36■□□□□ 0.37
CSPG5-202ENST00000383738 FCARP24071 287 aa17.36■□□□□ 0.37
CSPG5-202ENST00000383738 UNQ6126/PRO20091Q6UXV3 157 aa17.36■□□□□ 0.37
CSPG5-202ENST00000383738 ZNF546Q86UE3 836 aa17.36■□□□□ 0.37
CSPG5-202ENST00000383738 GID4Q8IVV7 300 aa17.36■□□□□ 0.37
CSPG5-202ENST00000383738 OR14A2Q96R54 314 aa17.36■□□□□ 0.37
CSPG5-202ENST00000383738 CER1O95813 267 aa17.36■□□□□ 0.37
CSPG5-202ENST00000383738 RBMS1P29558 406 aaKnown RBP17.36■□□□□ 0.37
CSPG5-202ENST00000383738 HLA-BQ31612 363 aa17.36■□□□□ 0.37
CSPG5-202ENST00000383738 FAM199XQ6PEV8 388 aaPredicted RBP17.36■□□□□ 0.37
CSPG5-202ENST00000383738 BTN2A1Q7KYR7 527 aa17.36■□□□□ 0.37
CSPG5-202ENST00000383738 LAS2Q8IYD9 372 aa17.36■□□□□ 0.37
CSPG5-202ENST00000383738 FCRL1Q96LA6 429 aa17.36■□□□□ 0.37
CSPG5-202ENST00000383738 SLC52A3Q9NQ40 469 aa17.36■□□□□ 0.37
CSPG5-202ENST00000383738 F5H5P2 479 aa17.35■□□□□ 0.37
CSPG5-202ENST00000383738 H7C1C5 153 aa17.35■□□□□ 0.37
CSPG5-202ENST00000383738 TO15178 435 aa17.35■□□□□ 0.37
CSPG5-202ENST00000383738 NTN1O95631 604 aa17.35■□□□□ 0.37
CSPG5-202ENST00000383738 ZFP36L2P47974 494 aaKnown RBP17.35■□□□□ 0.37
CSPG5-202ENST00000383738 CLDN20P56880 219 aa17.35■□□□□ 0.37
CSPG5-202ENST00000383738 LCN6P62502 163 aa17.35■□□□□ 0.37
CSPG5-202ENST00000383738 OTPQ5XKR4 325 aa17.35■□□□□ 0.37
CSPG5-202ENST00000383738 MED25Q71SY5 747 aa17.35■□□□□ 0.37
CSPG5-202ENST00000383738 GTPBP8Q8N3Z3 284 aaPredicted RBP17.35■□□□□ 0.37
CSPG5-202ENST00000383738 OR2AJ1Q8NGZ0 328 aa17.35■□□□□ 0.37
CSPG5-202ENST00000383738 SYNPRQ8TBG9 265 aa17.35■□□□□ 0.37
CSPG5-202ENST00000383738 METTL2AQ96IZ6 378 aaKnown RBP17.35■□□□□ 0.37
CSPG5-202ENST00000383738 TRAF4Q9BUZ4 470 aaPredicted RBP17.35■□□□□ 0.37
CSPG5-202ENST00000383738 TCN2P20062 427 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms