RNA–Protein interactions for RNA: ENST00000381867.5

SNPH-201, Transcript of syntaphilin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNPH, Length 5,533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-201ENST00000381867 F3P13726 295 aa12.97□□□□□ -0.33
SNPH-201ENST00000381867 RBMS3Q6XE24 437 aaKnown RBP12.97□□□□□ -0.33
SNPH-201ENST00000381867 CADM3Q8N126 398 aa12.97□□□□□ -0.33
SNPH-201ENST00000381867 KDM8Q8N371 416 aa12.97□□□□□ -0.33
SNPH-201ENST00000381867 RSC1A1Q92681 617 aa12.97□□□□□ -0.33
SNPH-201ENST00000381867 MSI2Q96DH6 328 aaKnown RBP12.97□□□□□ -0.33
SNPH-201ENST00000381867 SEC22AQ96IW7 307 aa12.97□□□□□ -0.33
SNPH-201ENST00000381867 SLC6A20Q9NP91 592 aa12.97□□□□□ -0.33
SNPH-201ENST00000381867 HAO2Q9NYQ3 351 aa12.97□□□□□ -0.33
SNPH-201ENST00000381867 CEBPZOSA8MTT3 80 aa12.97□□□□□ -0.33
SNPH-201ENST00000381867 TPPPO94811 219 aa12.97□□□□□ -0.33
SNPH-201ENST00000381867 SHC1P29353 583 aa12.97□□□□□ -0.33
SNPH-201ENST00000381867 IRS1P35568 1242 aa12.97□□□□□ -0.33
SNPH-201ENST00000381867 CSNK1A1P48729 337 aa12.97□□□□□ -0.33
SNPH-201ENST00000381867 SIRPAP78324 504 aa12.97□□□□□ -0.33
SNPH-201ENST00000381867 FBXW12Q6X9E4 464 aa12.97□□□□□ -0.33
SNPH-201ENST00000381867 RDH10Q8IZV5 341 aa12.97□□□□□ -0.33
SNPH-201ENST00000381867 CLEC1AQ8NC01 280 aa12.97□□□□□ -0.33
SNPH-201ENST00000381867 OR56B1Q8NGI3 324 aa12.97□□□□□ -0.33
SNPH-201ENST00000381867 OR13C2Q8NGS9 318 aa12.97□□□□□ -0.33
SNPH-201ENST00000381867 ABHD4Q8TB40 342 aa12.97□□□□□ -0.33
SNPH-201ENST00000381867 OR5M11Q96RB7 305 aa12.97□□□□□ -0.33
SNPH-201ENST00000381867 PTRH2Q9Y3E5 179 aaKnown RBP12.97□□□□□ -0.33
SNPH-201ENST00000381867 I6L893 689 aaPredicted RBP12.97□□□□□ -0.33
SNPH-201ENST00000381867 MPPED1O15442 326 aa12.97□□□□□ -0.33
SNPH-201ENST00000381867 OR2T7P0C7T2 308 aa12.97□□□□□ -0.33
SNPH-201ENST00000381867 ELK1P19419 428 aa12.97□□□□□ -0.33
SNPH-201ENST00000381867 ATP1B3P54709 279 aa12.97□□□□□ -0.33
SNPH-201ENST00000381867 BTG1P62324 171 aa12.97□□□□□ -0.33
SNPH-201ENST00000381867 SOHLH1Q5JUK2 328 aa12.97□□□□□ -0.33
SNPH-201ENST00000381867 UBALD2Q8IYN6 164 aa12.97□□□□□ -0.33
SNPH-201ENST00000381867 PRR22Q8IZ63 422 aa12.97□□□□□ -0.33
SNPH-201ENST00000381867 OR2T27Q8NH04 317 aa12.97□□□□□ -0.33
SNPH-201ENST00000381867 ASB11Q8WXH4 323 aa12.97□□□□□ -0.33
SNPH-201ENST00000381867 ARRDC3Q96B67 414 aa12.97□□□□□ -0.33
SNPH-201ENST00000381867 UPRTQ96BW1 309 aa12.97□□□□□ -0.33
SNPH-201ENST00000381867 UBXN10Q96LJ8 280 aa12.97□□□□□ -0.33
SNPH-201ENST00000381867 SDHAF2Q9NX18 166 aa12.97□□□□□ -0.33
SNPH-201ENST00000381867 PCSK6P29122 969 aa12.96□□□□□ -0.33
SNPH-201ENST00000381867 NXNL2Q5VZ03 156 aa12.96□□□□□ -0.33
SNPH-201ENST00000381867 GHSRQ92847 366 aa12.96□□□□□ -0.33
SNPH-201ENST00000381867 MARC2Q969Z3 335 aa12.96□□□□□ -0.33
SNPH-201ENST00000381867 SLC22A12Q96S37 553 aa12.96□□□□□ -0.33
SNPH-201ENST00000381867 GMPR2Q9P2T1 348 aaKnown RBP12.96□□□□□ -0.33
SNPH-201ENST00000381867 ETV7Q9Y603 341 aa12.96□□□□□ -0.33
SNPH-201ENST00000381867 LOC102725191A0A1B0GVB3 256 aa12.96□□□□□ -0.33
SNPH-201ENST00000381867 SCAF4O95104 1147 aaKnown RBP12.96□□□□□ -0.33
SNPH-201ENST00000381867 POU2F2P09086 479 aa12.96□□□□□ -0.33
SNPH-201ENST00000381867 HIST1H1TP22492 207 aaPredicted RBP12.96□□□□□ -0.33
SNPH-201ENST00000381867 APLNRP35414 380 aa12.96□□□□□ -0.33
SNPH-201ENST00000381867 KIAA1024LP59773 190 aa12.96□□□□□ -0.33
SNPH-201ENST00000381867 ACSM1Q08AH1 577 aa12.96□□□□□ -0.33
SNPH-201ENST00000381867 CMSS1Q9BQ75 279 aaKnown RBP12.96□□□□□ -0.33
SNPH-201ENST00000381867 NOX4Q9NPH5 578 aa12.96□□□□□ -0.33
SNPH-201ENST00000381867 TRDV1A0A1B0GX56 115 aa12.96□□□□□ -0.33
SNPH-201ENST00000381867 BCAT2O15382 392 aaPredicted RBP12.96□□□□□ -0.33
SNPH-201ENST00000381867 TK1P04183 234 aa12.96□□□□□ -0.33
SNPH-201ENST00000381867 DBHP09172 617 aa12.96□□□□□ -0.33
SNPH-201ENST00000381867 ZNF28P17035 718 aa12.96□□□□□ -0.33
SNPH-201ENST00000381867 HTR2CP28335 458 aa12.96□□□□□ -0.33
SNPH-201ENST00000381867 RNF4P78317 190 aa12.96□□□□□ -0.33
SNPH-201ENST00000381867 MRPS34P82930 218 aaKnown RBP12.96□□□□□ -0.33
SNPH-201ENST00000381867 MAVSQ7Z434 540 aa12.96□□□□□ -0.33
SNPH-201ENST00000381867 ANKRD19PQ9H560 264 aa12.96□□□□□ -0.33
SNPH-201ENST00000381867 OR52A4PA6NMU1 304 aa12.96□□□□□ -0.34
SNPH-201ENST00000381867 OR8G3PP0DMU2 310 aa12.96□□□□□ -0.34
SNPH-201ENST00000381867 CLDN12P56749 244 aa12.96□□□□□ -0.34
SNPH-201ENST00000381867 ZNF74Q16587 644 aa12.96□□□□□ -0.34
SNPH-201ENST00000381867 CCNJQ5T5M9 372 aa12.96□□□□□ -0.34
SNPH-201ENST00000381867 PLCXD3Q63HM9 321 aa12.96□□□□□ -0.34
SNPH-201ENST00000381867 VASNQ6EMK4 673 aa12.96□□□□□ -0.34
SNPH-201ENST00000381867 OR10K2Q6IF99 312 aa12.96□□□□□ -0.34
SNPH-201ENST00000381867 TMEM184AQ6ZMB5 413 aa12.96□□□□□ -0.34
SNPH-201ENST00000381867 VDAC3Q9Y277 283 aa12.96□□□□□ -0.34
SNPH-201ENST00000381867 SGK494L7N484 410 aa12.96□□□□□ -0.34
SNPH-201ENST00000381867 IDUAP35475 653 aa12.96□□□□□ -0.34
SNPH-201ENST00000381867 LIPAP38571 399 aa12.96□□□□□ -0.34
SNPH-201ENST00000381867 Q499Y3 187 aa12.96□□□□□ -0.34
SNPH-201ENST00000381867 CST9LP1Q5W188 147 aa12.96□□□□□ -0.34
SNPH-201ENST00000381867 ZNF480Q8WV37 535 aa12.96□□□□□ -0.34
SNPH-201ENST00000381867 CPNE4Q96A23 557 aaPredicted RBP12.96□□□□□ -0.34
SNPH-201ENST00000381867 SFXN2Q96NB2 322 aa12.96□□□□□ -0.34
SNPH-201ENST00000381867 CUTCQ9NTM9 273 aa12.96□□□□□ -0.34
SNPH-201ENST00000381867 MOKQ9UQ07 419 aa12.96□□□□□ -0.34
SNPH-201ENST00000381867 C20orf202A1L168 122 aa12.95□□□□□ -0.34
SNPH-201ENST00000381867 SULT2B1O00204 365 aa12.95□□□□□ -0.34
SNPH-201ENST00000381867 FOXE1O00358 373 aaPredicted RBP12.95□□□□□ -0.34
SNPH-201ENST00000381867 TNFRSF10CO14798 259 aa12.95□□□□□ -0.34
SNPH-201ENST00000381867 YY2O15391 372 aa12.95□□□□□ -0.34
SNPH-201ENST00000381867 LDB3O75112 727 aa12.95□□□□□ -0.34
SNPH-201ENST00000381867 C1QBP02746 253 aa12.95□□□□□ -0.34
SNPH-201ENST00000381867 CTGFP29279 349 aa12.95□□□□□ -0.34
SNPH-201ENST00000381867 PTGER1P34995 402 aa12.95□□□□□ -0.34
SNPH-201ENST00000381867 NDUFA6P56556 154 aa12.95□□□□□ -0.34
SNPH-201ENST00000381867 HTRA4P83105 476 aaPredicted RBP12.95□□□□□ -0.34
SNPH-201ENST00000381867 BRICD5Q6PL45 260 aa12.95□□□□□ -0.34
SNPH-201ENST00000381867 UBTD2Q8WUN7 234 aa12.95□□□□□ -0.34
SNPH-201ENST00000381867 RAB39BQ96DA2 213 aa12.95□□□□□ -0.34
SNPH-201ENST00000381867 DAZAP1Q96EP5 407 aaKnown RBP12.95□□□□□ -0.34
SNPH-201ENST00000381867 CBLCQ9ULV8 474 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms