RNA–Protein interactions for RNA: ENST00000381089.7

VCX3A-201, Transcript of variable charge X-linked 3A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VCX3A, Length 995 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-201ENST00000381089 RNF220Q5VTB9 566 aa13.83□□□□□ -0.2
VCX3A-201ENST00000381089 REP15Q6BDI9 236 aa13.83□□□□□ -0.2
VCX3A-201ENST00000381089 SHQ1Q6PI26 577 aaKnown RBP13.83□□□□□ -0.2
VCX3A-201ENST00000381089 VRK2Q86Y07 508 aa13.83□□□□□ -0.2
VCX3A-201ENST00000381089 ZCCHC24Q8N2G6 241 aaKnown RBP13.83□□□□□ -0.2
VCX3A-201ENST00000381089 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.83□□□□□ -0.2
VCX3A-201ENST00000381089 PIK3C3Q8NEB9 887 aa13.83□□□□□ -0.2
VCX3A-201ENST00000381089 ZMYND19Q96E35 227 aaPredicted RBP13.83□□□□□ -0.2
VCX3A-201ENST00000381089 NUF2Q9BZD4 464 aa13.83□□□□□ -0.2
VCX3A-201ENST00000381089 NELFAQ9H3P2 528 aa13.83□□□□□ -0.2
VCX3A-201ENST00000381089 SEC61A2Q9H9S3 476 aa13.83□□□□□ -0.2
VCX3A-201ENST00000381089 CRLF2Q9HC73 371 aa13.83□□□□□ -0.2
VCX3A-201ENST00000381089 PNPOQ9NVS9 261 aa13.83□□□□□ -0.2
VCX3A-201ENST00000381089 THAP1Q9NVV9 213 aa13.83□□□□□ -0.2
VCX3A-201ENST00000381089 ZNF443Q9Y2A4 671 aaPredicted RBP13.83□□□□□ -0.2
VCX3A-201ENST00000381089 RFXANKO14593 260 aa13.82□□□□□ -0.2
VCX3A-201ENST00000381089 NPIPB7O75200 414 aa13.82□□□□□ -0.2
VCX3A-201ENST00000381089 KITP10721 976 aa13.82□□□□□ -0.2
VCX3A-201ENST00000381089 PNMTP11086 282 aa13.82□□□□□ -0.2
VCX3A-201ENST00000381089 NME5P56597 212 aa13.82□□□□□ -0.2
VCX3A-201ENST00000381089 ACTG1P63261 375 aa13.82□□□□□ -0.2
VCX3A-201ENST00000381089 TRIP10Q15642 601 aa13.82□□□□□ -0.2
VCX3A-201ENST00000381089 COX20Q5RI15 118 aa13.82□□□□□ -0.2
VCX3A-201ENST00000381089 KRT80Q6KB66 452 aa13.82□□□□□ -0.2
VCX3A-201ENST00000381089 OGFOD2Q6N063 350 aa13.82□□□□□ -0.2
VCX3A-201ENST00000381089 CDK20Q8IZL9 346 aa13.82□□□□□ -0.2
VCX3A-201ENST00000381089 TEX29Q8N6K0 151 aa13.82□□□□□ -0.2
VCX3A-201ENST00000381089 ZNF418Q8TF45 676 aaPredicted RBP13.82□□□□□ -0.2
VCX3A-201ENST00000381089 MAGEB18Q96M61 343 aa13.82□□□□□ -0.2
VCX3A-201ENST00000381089 OXGR1Q96P68 337 aa13.82□□□□□ -0.2
VCX3A-201ENST00000381089 PLA2G12AQ9BZM1 189 aa13.82□□□□□ -0.2
VCX3A-201ENST00000381089 TPK1Q9H3S4 243 aa13.82□□□□□ -0.2
VCX3A-201ENST00000381089 MS4A5Q9H3V2 200 aa13.82□□□□□ -0.2
VCX3A-201ENST00000381089 METTL17Q9H7H0 456 aaPredicted RBP13.82□□□□□ -0.2
VCX3A-201ENST00000381089 NOX3Q9HBY0 568 aa13.82□□□□□ -0.2
VCX3A-201ENST00000381089 GPR35Q9HC97 309 aa13.82□□□□□ -0.2
VCX3A-201ENST00000381089 SLCO1B3Q9NPD5 702 aa13.82□□□□□ -0.2
VCX3A-201ENST00000381089 THUMPD1Q9NXG2 353 aaKnown RBP13.82□□□□□ -0.2
VCX3A-201ENST00000381089 GRIP1Q9Y3R0 1128 aa13.82□□□□□ -0.2
VCX3A-201ENST00000381089 NOX1Q9Y5S8 564 aa13.82□□□□□ -0.2
VCX3A-201ENST00000381089 TMEM129A0AVI4 362 aa13.81□□□□□ -0.2
VCX3A-201ENST00000381089 TMEM229AB2RXF0 380 aa13.81□□□□□ -0.2
VCX3A-201ENST00000381089 M0R233 179 aa13.81□□□□□ -0.2
VCX3A-201ENST00000381089 AIM2O14862 343 aa13.81□□□□□ -0.2
VCX3A-201ENST00000381089 SPRY1O43609 319 aaPredicted RBP13.81□□□□□ -0.2
VCX3A-201ENST00000381089 SYNGR3O43761 229 aa13.81□□□□□ -0.2
VCX3A-201ENST00000381089 OR2T1O43869 369 aa13.81□□□□□ -0.2
VCX3A-201ENST00000381089 C1QCP02747 245 aa13.81□□□□□ -0.2
VCX3A-201ENST00000381089 BCHEP06276 602 aa13.81□□□□□ -0.2
VCX3A-201ENST00000381089 GSNP06396 782 aa13.81□□□□□ -0.2
VCX3A-201ENST00000381089 CDKN2CP42773 168 aa13.81□□□□□ -0.2
VCX3A-201ENST00000381089 CRATP43155 626 aa13.81□□□□□ -0.2
VCX3A-201ENST00000381089 GPR6P46095 362 aaPredicted RBP13.81□□□□□ -0.2
VCX3A-201ENST00000381089 RPS5P46782 204 aaKnown RBP13.81□□□□□ -0.2
VCX3A-201ENST00000381089 EVX1P49640 407 aa13.81□□□□□ -0.2
VCX3A-201ENST00000381089 GYS2P54840 703 aa13.81□□□□□ -0.2
VCX3A-201ENST00000381089 UFM1P61960 85 aa13.81□□□□□ -0.2
VCX3A-201ENST00000381089 CEACAM16Q2WEN9 425 aa13.81□□□□□ -0.2
VCX3A-201ENST00000381089 SLC9B1Q4ZJI4 515 aa13.81□□□□□ -0.2
VCX3A-201ENST00000381089 C5orf46Q6UWT4 87 aa13.81□□□□□ -0.2
VCX3A-201ENST00000381089 DEF8Q6ZN54 512 aa13.81□□□□□ -0.2
VCX3A-201ENST00000381089 MDP1Q86V88 176 aa13.81□□□□□ -0.2
VCX3A-201ENST00000381089 LSRQ86X29 649 aaPredicted RBP13.81□□□□□ -0.2
VCX3A-201ENST00000381089 KDM8Q8N371 416 aa13.81□□□□□ -0.2
VCX3A-201ENST00000381089 GLB1L3Q8NCI6 653 aaPredicted RBP13.81□□□□□ -0.2
VCX3A-201ENST00000381089 SPATA9Q9BWV2 254 aa13.81□□□□□ -0.2
VCX3A-201ENST00000381089 MEAF6Q9HAF1 191 aa13.81□□□□□ -0.2
VCX3A-201ENST00000381089 RPS6KB2Q9UBS0 482 aa13.81□□□□□ -0.2
VCX3A-201ENST00000381089 REV1Q9UBZ9 1251 aa13.81□□□□□ -0.2
VCX3A-201ENST00000381089 IFT52Q9Y366 437 aa13.81□□□□□ -0.2
VCX3A-201ENST00000381089 DSPPQ9NZW4 1301 aa13.81□□□□□ -0.2
VCX3A-201ENST00000381089 ZNF99A8MXY4 864 aaPredicted RBP13.8□□□□□ -0.2
VCX3A-201ENST00000381089 FTCDNL1E5RQL4 147 aa13.8□□□□□ -0.2
VCX3A-201ENST00000381089 POLR3GO15318 223 aaPredicted RBP13.8□□□□□ -0.2
VCX3A-201ENST00000381089 ZNF432O94892 652 aa13.8□□□□□ -0.2
VCX3A-201ENST00000381089 ANP32DO95626 131 aa13.8□□□□□ -0.2
VCX3A-201ENST00000381089 TFP02787 698 aa13.8□□□□□ -0.2
VCX3A-201ENST00000381089 NR4A1P22736 598 aa13.8□□□□□ -0.2
VCX3A-201ENST00000381089 DSTNP60981 165 aa13.8□□□□□ -0.2
VCX3A-201ENST00000381089 RPS23P62266 143 aaKnown RBP13.8□□□□□ -0.2
VCX3A-201ENST00000381089 TRMT5Q32P41 509 aaKnown RBP13.8□□□□□ -0.2
VCX3A-201ENST00000381089 MYPOPQ86VE0 399 aaPredicted RBP13.8□□□□□ -0.2
VCX3A-201ENST00000381089 SNX32Q86XE0 403 aa13.8□□□□□ -0.2
VCX3A-201ENST00000381089 MRPL24Q96A35 216 aaKnown RBP13.8□□□□□ -0.2
VCX3A-201ENST00000381089 TMEM186Q96B77 213 aa13.8□□□□□ -0.2
VCX3A-201ENST00000381089 TEX37Q96LM6 180 aa13.8□□□□□ -0.2
VCX3A-201ENST00000381089 B3GAT2Q9NPZ5 323 aa13.8□□□□□ -0.2
VCX3A-201ENST00000381089 AIG1Q9NVV5 245 aa13.8□□□□□ -0.2
VCX3A-201ENST00000381089 A0A0G2JPF8 293 aa13.79□□□□□ -0.2
VCX3A-201ENST00000381089 HNRNPCL2B2RXH8 293 aa13.79□□□□□ -0.2
VCX3A-201ENST00000381089 HNRNPCL3B7ZW38 293 aa13.79□□□□□ -0.2
VCX3A-201ENST00000381089 LYNX1G3V0Z9 82 aa13.79□□□□□ -0.2
VCX3A-201ENST00000381089 HNRNPCL1O60812 293 aaKnown RBP13.79□□□□□ -0.2
VCX3A-201ENST00000381089 IL6P05231 212 aa13.79□□□□□ -0.2
VCX3A-201ENST00000381089 HNRNPCL4P0DMR1 293 aa13.79□□□□□ -0.2
VCX3A-201ENST00000381089 LYNX1P0DP58 116 aa13.79□□□□□ -0.2
VCX3A-201ENST00000381089 SAGP10523 405 aaPredicted RBP13.79□□□□□ -0.2
VCX3A-201ENST00000381089 CD79AP11912 226 aa13.79□□□□□ -0.2
VCX3A-201ENST00000381089 PRG2P13727 222 aa13.79□□□□□ -0.2
VCX3A-201ENST00000381089 ACHEP22303 614 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms