RNA–Protein interactions for RNA: ENST00000380829.5

CLCN4-201, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 2,418 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-201ENST00000380829 SLC35A3Q9Y2D2 325 aa13.02□□□□□ -0.33
CLCN4-201ENST00000380829 WDFY3Q8IZQ1 3526 aa13.02□□□□□ -0.33
CLCN4-201ENST00000380829 CCDC163A0A0D9SF12 145 aa13.01□□□□□ -0.33
CLCN4-201ENST00000380829 FAM86C2PA6NEL3 165 aa13.01□□□□□ -0.33
CLCN4-201ENST00000380829 FRG2CA6NGY1 282 aa13.01□□□□□ -0.33
CLCN4-201ENST00000380829 TEX46H3BTG2 121 aa13.01□□□□□ -0.33
CLCN4-201ENST00000380829 SCDO00767 359 aa13.01□□□□□ -0.33
CLCN4-201ENST00000380829 KHNYNO15037 678 aaKnown RBP13.01□□□□□ -0.33
CLCN4-201ENST00000380829 TIAF1O95411 115 aa13.01□□□□□ -0.33
CLCN4-201ENST00000380829 IFNA7P01567 189 aa13.01□□□□□ -0.33
CLCN4-201ENST00000380829 CLUP10909 449 aa13.01□□□□□ -0.33
CLCN4-201ENST00000380829 CPEP16870 476 aa13.01□□□□□ -0.33
CLCN4-201ENST00000380829 NOS3P29474 1203 aa13.01□□□□□ -0.33
CLCN4-201ENST00000380829 RPS25P62851 125 aaKnown RBP13.01□□□□□ -0.33
CLCN4-201ENST00000380829 ZSWIM7Q19AV6 140 aa13.01□□□□□ -0.33
CLCN4-201ENST00000380829 GXYLT1Q4G148 440 aa13.01□□□□□ -0.33
CLCN4-201ENST00000380829 RTL4Q6ZR62 310 aa13.01□□□□□ -0.33
CLCN4-201ENST00000380829 ASB18Q6ZVZ8 466 aa13.01□□□□□ -0.33
CLCN4-201ENST00000380829 ZNF527Q8NB42 609 aa13.01□□□□□ -0.33
CLCN4-201ENST00000380829 SLC38A9Q8NBW4 561 aa13.01□□□□□ -0.33
CLCN4-201ENST00000380829 PTP4A1Q93096 173 aa13.01□□□□□ -0.33
CLCN4-201ENST00000380829 KLHDC3Q9BQ90 382 aa13.01□□□□□ -0.33
CLCN4-201ENST00000380829 MESP1Q9BRJ9 268 aa13.01□□□□□ -0.33
CLCN4-201ENST00000380829 IER2Q9BTL4 223 aa13.01□□□□□ -0.33
CLCN4-201ENST00000380829 OR51V1Q9H2C8 321 aa13.01□□□□□ -0.33
CLCN4-201ENST00000380829 SLC22A11Q9NSA0 550 aa13.01□□□□□ -0.33
CLCN4-201ENST00000380829 FBXL4Q9UKA2 621 aa13.01□□□□□ -0.33
CLCN4-201ENST00000380829 EXOGQ9Y2C4 368 aaKnown RBP13.01□□□□□ -0.33
CLCN4-201ENST00000380829 HRH3Q9Y5N1 445 aa13.01□□□□□ -0.33
CLCN4-201ENST00000380829 A0A087WUJ7 227 aa13.01□□□□□ -0.33
CLCN4-201ENST00000380829 IGHV3-20A0A0C4DH32 117 aa13.01□□□□□ -0.33
CLCN4-201ENST00000380829 C17orf51A8MQB3 221 aa13.01□□□□□ -0.33
CLCN4-201ENST00000380829 ICOSLGO75144 302 aa13.01□□□□□ -0.33
CLCN4-201ENST00000380829 REM1O75628 298 aa13.01□□□□□ -0.33
CLCN4-201ENST00000380829 LALBAP00709 142 aa13.01□□□□□ -0.33
CLCN4-201ENST00000380829 HOXA6P31267 233 aa13.01□□□□□ -0.33
CLCN4-201ENST00000380829 NR0B1P51843 470 aaKnown RBP13.01□□□□□ -0.33
CLCN4-201ENST00000380829 RPS7P62081 194 aaKnown RBP13.01□□□□□ -0.33
CLCN4-201ENST00000380829 EBPQ15125 230 aaKnown RBP13.01□□□□□ -0.33
CLCN4-201ENST00000380829 SF3A2Q15428 464 aaKnown RBP13.01□□□□□ -0.33
CLCN4-201ENST00000380829 PLK5Q496M5 336 aa13.01□□□□□ -0.33
CLCN4-201ENST00000380829 FNDC7Q5VTL7 733 aa13.01□□□□□ -0.33
CLCN4-201ENST00000380829 COX15Q7KZN9 410 aa13.01□□□□□ -0.33
CLCN4-201ENST00000380829 GID4Q8IVV7 300 aa13.01□□□□□ -0.33
CLCN4-201ENST00000380829 MS4A15Q8N5U1 240 aa13.01□□□□□ -0.33
CLCN4-201ENST00000380829 BMPERQ8N8U9 685 aa13.01□□□□□ -0.33
CLCN4-201ENST00000380829 WBP1Q96G27 269 aa13.01□□□□□ -0.33
CLCN4-201ENST00000380829 OR6C1Q96RD1 312 aa13.01□□□□□ -0.33
CLCN4-201ENST00000380829 TBX5Q99593 518 aa13.01□□□□□ -0.33
CLCN4-201ENST00000380829 USB1Q9BQ65 265 aaKnown RBP13.01□□□□□ -0.33
CLCN4-201ENST00000380829 RTN4RQ9BZR6 473 aa13.01□□□□□ -0.33
CLCN4-201ENST00000380829 MKKSQ9NPJ1 570 aaPredicted RBP13.01□□□□□ -0.33
CLCN4-201ENST00000380829 IFT46Q9NQC8 304 aa13.01□□□□□ -0.33
CLCN4-201ENST00000380829 KCNMB2Q9Y691 235 aa13.01□□□□□ -0.33
CLCN4-201ENST00000380829 A0A1W2PPL8 197 aa13□□□□□ -0.33
CLCN4-201ENST00000380829 PRR23D1E9PI22 279 aaPredicted RBP13□□□□□ -0.33
CLCN4-201ENST00000380829 TOXO94900 526 aa13□□□□□ -0.33
CLCN4-201ENST00000380829 PAHP00439 452 aa13□□□□□ -0.33
CLCN4-201ENST00000380829 PRR23D2P0DMB1 279 aaPredicted RBP13□□□□□ -0.33
CLCN4-201ENST00000380829 TDGF1P13385 188 aa13□□□□□ -0.33
CLCN4-201ENST00000380829 ZP3P21754 424 aa13□□□□□ -0.33
CLCN4-201ENST00000380829 PAICSP22234 425 aaKnown RBP13□□□□□ -0.33
CLCN4-201ENST00000380829 GPR143P51810 404 aa13□□□□□ -0.33
CLCN4-201ENST00000380829 SKP2Q13309 424 aa13□□□□□ -0.33
CLCN4-201ENST00000380829 CRMP1Q14194 572 aa13□□□□□ -0.33
CLCN4-201ENST00000380829 LRFN4Q6PJG9 635 aa13□□□□□ -0.33
CLCN4-201ENST00000380829 MEPCEQ7L2J0 689 aaKnown RBP13□□□□□ -0.33
CLCN4-201ENST00000380829 WDR5BQ86VZ2 330 aa13□□□□□ -0.33
CLCN4-201ENST00000380829 EID2Q8N6I1 236 aa13□□□□□ -0.33
CLCN4-201ENST00000380829 LINC00469Q8N7U9 141 aa13□□□□□ -0.33
CLCN4-201ENST00000380829 ZNF485Q8NCK3 441 aa13□□□□□ -0.33
CLCN4-201ENST00000380829 FAM71CQ8NEG0 241 aa13□□□□□ -0.33
CLCN4-201ENST00000380829 DAZLQ92904 295 aaKnown RBP13□□□□□ -0.33
CLCN4-201ENST00000380829 CREB3L1Q96BA8 519 aa13□□□□□ -0.33
CLCN4-201ENST00000380829 ZNF524Q96C55 264 aa13□□□□□ -0.33
CLCN4-201ENST00000380829 SGTBQ96EQ0 304 aa13□□□□□ -0.33
CLCN4-201ENST00000380829 MS4A3Q96HJ5 214 aa13□□□□□ -0.33
CLCN4-201ENST00000380829 ARHGAP9Q9BRR9 750 aa13□□□□□ -0.33
CLCN4-201ENST00000380829 ZNF649Q9BS31 505 aa13□□□□□ -0.33
CLCN4-201ENST00000380829 FN3KQ9H479 309 aa13□□□□□ -0.33
CLCN4-201ENST00000380829 SAV1Q9H4B6 383 aaPredicted RBP13□□□□□ -0.33
CLCN4-201ENST00000380829 GAREM1Q9H706 876 aa13□□□□□ -0.33
CLCN4-201ENST00000380829 NUP210LQ5VU65 1888 aa13□□□□□ -0.33
CLCN4-201ENST00000380829 RIIAD1A6NNX1 92 aa13□□□□□ -0.33
CLCN4-201ENST00000380829 PATE3B3GLJ2 98 aa13□□□□□ -0.33
CLCN4-201ENST00000380829 LANCL1O43813 399 aa13□□□□□ -0.33
CLCN4-201ENST00000380829 IGHA1P01876 353 aa13□□□□□ -0.33
CLCN4-201ENST00000380829 GYPBP06028 91 aa13□□□□□ -0.33
CLCN4-201ENST00000380829 MRPL3P09001 348 aaKnown RBP13□□□□□ -0.33
CLCN4-201ENST00000380829 RAB14P61106 215 aa13□□□□□ -0.33
CLCN4-201ENST00000380829 IKZF1Q13422 519 aa13□□□□□ -0.33
CLCN4-201ENST00000380829 HLA-DQA1Q5Y7H0 255 aa13□□□□□ -0.33
CLCN4-201ENST00000380829 OR14A16Q8NHC5 309 aa13□□□□□ -0.33
CLCN4-201ENST00000380829 KISS1RQ969F8 398 aaPredicted RBP13□□□□□ -0.33
CLCN4-201ENST00000380829 C1GALT1C1Q96EU7 318 aa13□□□□□ -0.33
CLCN4-201ENST00000380829 KCNJ15Q99712 375 aa13□□□□□ -0.33
CLCN4-201ENST00000380829 RANBP3Q9H6Z4 567 aaPredicted RBP13□□□□□ -0.33
CLCN4-201ENST00000380829 COPS7AQ9UBW8 275 aa13□□□□□ -0.33
CLCN4-201ENST00000380829 SUSD2Q9UGT4 822 aa13□□□□□ -0.33
CLCN4-201ENST00000380829 PPIEQ9UNP9 301 aaKnown RBP13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms