RNA–Protein interactions for RNA: ENST00000380176.7

PDLIM5-204, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best)

Gene PDLIM5, Length 3,098 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-204ENST00000380176 TAS2R43P59537 309 aa7.24□□□□□ -1.25
PDLIM5-204ENST00000380176 RPS11P62280 158 aaKnown RBP eCLIP7.24□□□□□ -1.25
PDLIM5-204ENST00000380176 LCN6P62502 163 aa7.24□□□□□ -1.25
PDLIM5-204ENST00000380176 CDK5R1Q15078 307 aa7.24□□□□□ -1.25
PDLIM5-204ENST00000380176 ELAVL1Q15717 326 aaKnown RBP7.24□□□□□ -1.25
PDLIM5-204ENST00000380176 CDONQ4KMG0 1287 aa7.24□□□□□ -1.25
PDLIM5-204ENST00000380176 LRRC69Q6ZNQ3 347 aa7.24□□□□□ -1.25
PDLIM5-204ENST00000380176 SPEM1Q8N4L4 309 aa7.24□□□□□ -1.25
PDLIM5-204ENST00000380176 OR6F1Q8NGZ6 308 aa7.24□□□□□ -1.25
PDLIM5-204ENST00000380176 ZNF563Q8TA94 476 aa7.24□□□□□ -1.25
PDLIM5-204ENST00000380176 THAP4Q8WY91 577 aa7.24□□□□□ -1.25
PDLIM5-204ENST00000380176 DNASE2BQ8WZ79 361 aa7.24□□□□□ -1.25
PDLIM5-204ENST00000380176 TAAR8Q969N4 342 aa7.24□□□□□ -1.25
PDLIM5-204ENST00000380176 ZNF501Q96CX3 271 aaPredicted RBP7.24□□□□□ -1.25
PDLIM5-204ENST00000380176 SLC41A2Q96JW4 573 aa7.24□□□□□ -1.25
PDLIM5-204ENST00000380176 ELF4Q99607 663 aaPredicted RBP7.24□□□□□ -1.25
PDLIM5-204ENST00000380176 LPAR4Q99677 370 aa7.24□□□□□ -1.25
PDLIM5-204ENST00000380176 DPYSL5Q9BPU6 564 aa7.24□□□□□ -1.25
PDLIM5-204ENST00000380176 SLC19A3Q9BZV2 496 aa7.24□□□□□ -1.25
PDLIM5-204ENST00000380176 VN1R1Q9GZP7 353 aa7.24□□□□□ -1.25
PDLIM5-204ENST00000380176 HOXD1Q9GZZ0 328 aa7.24□□□□□ -1.25
PDLIM5-204ENST00000380176 CTSFQ9UBX1 484 aa7.24□□□□□ -1.25
PDLIM5-204ENST00000380176 HIF3AQ9Y2N7 669 aa7.24□□□□□ -1.25
PDLIM5-204ENST00000380176 RBMX2Q9Y388 322 aaKnown RBP7.24□□□□□ -1.25
PDLIM5-204ENST00000380176 IGHV3-20A0A0C4DH32 117 aa7.24□□□□□ -1.25
PDLIM5-204ENST00000380176 HCRTR2O43614 444 aa7.24□□□□□ -1.25
PDLIM5-204ENST00000380176 LANCL1O43813 399 aa7.24□□□□□ -1.25
PDLIM5-204ENST00000380176 HLA-DQB1P01920 261 aa7.24□□□□□ -1.25
PDLIM5-204ENST00000380176 PNMTP11086 282 aa7.24□□□□□ -1.25
PDLIM5-204ENST00000380176 SFTPCP11686 197 aa7.24□□□□□ -1.25
PDLIM5-204ENST00000380176 CFL1P23528 166 aaKnown RBP7.24□□□□□ -1.25
PDLIM5-204ENST00000380176 ID4P47928 161 aa7.24□□□□□ -1.25
PDLIM5-204ENST00000380176 GDI2P50395 445 aaKnown RBP7.24□□□□□ -1.25
PDLIM5-204ENST00000380176 CTXN1P60606 82 aa7.24□□□□□ -1.25
PDLIM5-204ENST00000380176 PRPS1P60891 318 aa7.24□□□□□ -1.25
PDLIM5-204ENST00000380176 SIRPAP78324 504 aa7.24□□□□□ -1.25
PDLIM5-204ENST00000380176 BIKQ13323 160 aa7.24□□□□□ -1.25
PDLIM5-204ENST00000380176 SHBQ15464 509 aa7.24□□□□□ -1.25
PDLIM5-204ENST00000380176 ANKRD39Q53RE8 183 aa7.24□□□□□ -1.25
PDLIM5-204ENST00000380176 ALG10Q5BKT4 473 aa7.24□□□□□ -1.25
PDLIM5-204ENST00000380176 ARHGAP40Q5TG30 622 aa7.24□□□□□ -1.25
PDLIM5-204ENST00000380176 LCN1P1Q5VSP4 162 aa7.24□□□□□ -1.25
PDLIM5-204ENST00000380176 METAP1DQ6UB28 335 aaPredicted RBP7.24□□□□□ -1.25
PDLIM5-204ENST00000380176 DBX2Q6ZNG2 339 aa7.24□□□□□ -1.25
PDLIM5-204ENST00000380176 C16orf47Q6ZP98 133 aaPredicted RBP7.24□□□□□ -1.25
PDLIM5-204ENST00000380176 TRILQ7L0X0 811 aa7.24□□□□□ -1.25
PDLIM5-204ENST00000380176 SLITRK4Q8IW52 837 aa7.24□□□□□ -1.25
PDLIM5-204ENST00000380176 GPR135Q8IZ08 494 aa7.24□□□□□ -1.25
PDLIM5-204ENST00000380176 RDH10Q8IZV5 341 aa7.24□□□□□ -1.25
PDLIM5-204ENST00000380176 SAMD12Q8N8I0 201 aa7.24□□□□□ -1.25
PDLIM5-204ENST00000380176 POMGNT2Q8NAT1 580 aa7.24□□□□□ -1.25
PDLIM5-204ENST00000380176 OR4M1Q8NGD0 313 aa7.24□□□□□ -1.25
PDLIM5-204ENST00000380176 SNX33Q8WV41 574 aa7.24□□□□□ -1.25
PDLIM5-204ENST00000380176 MVB12AQ96EY5 273 aa7.24□□□□□ -1.25
PDLIM5-204ENST00000380176 TMEM43Q9BTV4 400 aa7.24□□□□□ -1.25
PDLIM5-204ENST00000380176 EXOSC3Q9NQT5 275 aaKnown RBP7.24□□□□□ -1.25
PDLIM5-204ENST00000380176 FGF21Q9NSA1 209 aa7.24□□□□□ -1.25
PDLIM5-204ENST00000380176 NCDNQ9UBB6 729 aa7.24□□□□□ -1.25
PDLIM5-204ENST00000380176 CDV3Q9UKY7 258 aaKnown RBP7.24□□□□□ -1.25
PDLIM5-204ENST00000380176 K7ESF4 209 aa7.24□□□□□ -1.25
PDLIM5-204ENST00000380176 UQCRC1P31930 480 aa7.24□□□□□ -1.25
PDLIM5-204ENST00000380176 RPL18Q07020 188 aaKnown RBP7.24□□□□□ -1.25
PDLIM5-204ENST00000380176 RSBN1Q5VWQ0 802 aaPredicted RBP7.24□□□□□ -1.25
PDLIM5-204ENST00000380176 TRIQKQ629K1 86 aa7.24□□□□□ -1.25
PDLIM5-204ENST00000380176 ZNF544Q6NX49 715 aa7.24□□□□□ -1.25
PDLIM5-204ENST00000380176 TSSK4Q6SA08 328 aa7.24□□□□□ -1.25
PDLIM5-204ENST00000380176 OR4D9Q8NGE8 314 aa7.24□□□□□ -1.25
PDLIM5-204ENST00000380176 OR5H6Q8NGV6 325 aa7.24□□□□□ -1.25
PDLIM5-204ENST00000380176 CEP76Q8TAP6 659 aa7.24□□□□□ -1.25
PDLIM5-204ENST00000380176 RNF166Q96A37 237 aaPredicted RBP7.24□□□□□ -1.25
PDLIM5-204ENST00000380176 SMIM19Q96E16 107 aa7.24□□□□□ -1.25
PDLIM5-204ENST00000380176 LRFN5Q96NI6 719 aa7.24□□□□□ -1.25
PDLIM5-204ENST00000380176 RBM14Q96PK6 669 aaKnown RBP7.24□□□□□ -1.25
PDLIM5-204ENST00000380176 OR14A2Q96R54 314 aa7.24□□□□□ -1.25
PDLIM5-204ENST00000380176 GPX7Q96SL4 187 aaPredicted RBP7.24□□□□□ -1.25
PDLIM5-204ENST00000380176 ALG12Q9BV10 488 aa7.24□□□□□ -1.25
PDLIM5-204ENST00000380176 WWTR1Q9GZV5 400 aa7.24□□□□□ -1.25
PDLIM5-204ENST00000380176 ADAM19Q9H013 955 aa7.24□□□□□ -1.25
PDLIM5-204ENST00000380176 SLC22A11Q9NSA0 550 aa7.24□□□□□ -1.25
PDLIM5-204ENST00000380176 WNT16Q9UBV4 365 aa7.24□□□□□ -1.25
PDLIM5-204ENST00000380176 ATXN7L1Q9ULK2 861 aaPredicted RBP7.24□□□□□ -1.25
PDLIM5-204ENST00000380176 KLHDC2Q9Y2U9 406 aa7.24□□□□□ -1.25
PDLIM5-204ENST00000380176 CPAMD8Q8IZJ3 1885 aa7.23□□□□□ -1.25
PDLIM5-204ENST00000380176 TRBV2A0A0J9YWF9 115 aa7.23□□□□□ -1.25
PDLIM5-204ENST00000380176 TSPAN2O60636 221 aa7.23□□□□□ -1.25
PDLIM5-204ENST00000380176 SLC19A2O60779 497 aa7.23□□□□□ -1.25
PDLIM5-204ENST00000380176 GPANK1O95872 356 aa7.23□□□□□ -1.25
PDLIM5-204ENST00000380176 CD14P08571 375 aa7.23□□□□□ -1.25
PDLIM5-204ENST00000380176 MYL9P24844 172 aa7.23□□□□□ -1.25
PDLIM5-204ENST00000380176 EDNRAP25101 427 aa7.23□□□□□ -1.25
PDLIM5-204ENST00000380176 ITPKBP27987 946 aa7.23□□□□□ -1.25
PDLIM5-204ENST00000380176 ABCD3P28288 659 aa7.23□□□□□ -1.25
PDLIM5-204ENST00000380176 IL12BP29460 328 aa7.23□□□□□ -1.25
PDLIM5-204ENST00000380176 NANOS3P60323 173 aaKnown RBP7.23□□□□□ -1.25
PDLIM5-204ENST00000380176 RIN1Q13671 783 aa7.23□□□□□ -1.25
PDLIM5-204ENST00000380176 TRAM1Q15629 374 aa7.23□□□□□ -1.25
PDLIM5-204ENST00000380176 CEP78Q5JTW2 689 aa7.23□□□□□ -1.25
PDLIM5-204ENST00000380176 OTPQ5XKR4 325 aa7.23□□□□□ -1.25
PDLIM5-204ENST00000380176 ZNF574Q6ZN55 896 aaPredicted RBP7.23□□□□□ -1.25
PDLIM5-204ENST00000380176 SYS1Q8N2H4 156 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms