RNA–Protein interactions for RNA: ENST00000380075.6

TRIM54-202, Transcript of tripartite motif containing 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM54, Length 1,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54-202ENST00000380075 MOV10Q9HCE1 1003 aaKnown RBP19.58■□□□□ 0.73
TRIM54-202ENST00000380075 EXTL2Q9UBQ6 330 aa19.58■□□□□ 0.73
TRIM54-202ENST00000380075 ANKRD61A6NGH8 418 aa19.57■□□□□ 0.72
TRIM54-202ENST00000380075 HIST1H2ABP04908 130 aa19.57■□□□□ 0.72
TRIM54-202ENST00000380075 ELK1P19419 428 aa19.57■□□□□ 0.72
TRIM54-202ENST00000380075 RAB3BP20337 219 aa19.57■□□□□ 0.72
TRIM54-202ENST00000380075 TACR3P29371 465 aa19.57■□□□□ 0.72
TRIM54-202ENST00000380075 RBMS1P29558 406 aaKnown RBP19.57■□□□□ 0.72
TRIM54-202ENST00000380075 ZNF117Q03924 483 aa19.57■□□□□ 0.72
TRIM54-202ENST00000380075 PLCXD2Q0VAA5 305 aa19.57■□□□□ 0.72
TRIM54-202ENST00000380075 P2RY14Q15391 338 aa19.57■□□□□ 0.72
TRIM54-202ENST00000380075 VWA2Q5GFL6 755 aa19.57■□□□□ 0.72
TRIM54-202ENST00000380075 GPR139Q6DWJ6 353 aa19.57■□□□□ 0.72
TRIM54-202ENST00000380075 HIST3H2AQ7L7L0 130 aa19.57■□□□□ 0.72
TRIM54-202ENST00000380075 RFLNBQ8N5W9 214 aa19.57■□□□□ 0.72
TRIM54-202ENST00000380075 OR51L1Q8NGJ5 315 aa19.57■□□□□ 0.72
TRIM54-202ENST00000380075 OR6K6Q8NGW6 343 aa19.57■□□□□ 0.72
TRIM54-202ENST00000380075 IFI44Q8TCB0 444 aa19.57■□□□□ 0.72
TRIM54-202ENST00000380075 HIST1H2ACQ93077 130 aa19.57■□□□□ 0.72
TRIM54-202ENST00000380075 CCDC74AQ96AQ1 378 aa19.57■□□□□ 0.72
TRIM54-202ENST00000380075 Q96M85 177 aa19.57■□□□□ 0.72
TRIM54-202ENST00000380075 MOGAT1Q96PD6 335 aa19.57■□□□□ 0.72
TRIM54-202ENST00000380075 ALG12Q9BV10 488 aa19.57■□□□□ 0.72
TRIM54-202ENST00000380075 INIPQ9NRY2 104 aa19.57■□□□□ 0.72
TRIM54-202ENST00000380075 FGF21Q9NSA1 209 aa19.57■□□□□ 0.72
TRIM54-202ENST00000380075 A0A0G2JK05 382 aa19.57■□□□□ 0.72
TRIM54-202ENST00000380075 LINC00854A0A1B0GVQ3 168 aa19.57■□□□□ 0.72
TRIM54-202ENST00000380075 NPR2P20594 1047 aa19.57■□□□□ 0.72
TRIM54-202ENST00000380075 ACP1P24666 158 aa19.57■□□□□ 0.72
TRIM54-202ENST00000380075 DUSP3P51452 185 aaPredicted RBP19.57■□□□□ 0.72
TRIM54-202ENST00000380075 NR0B1P51843 470 aaKnown RBP19.57■□□□□ 0.72
TRIM54-202ENST00000380075 CTXN1P60606 82 aa19.57■□□□□ 0.72
TRIM54-202ENST00000380075 GXYLT1Q4G148 440 aa19.57■□□□□ 0.72
TRIM54-202ENST00000380075 LINC01590Q5TEZ4 76 aa19.57■□□□□ 0.72
TRIM54-202ENST00000380075 PRAMEF17Q5VTA0 474 aa19.57■□□□□ 0.72
TRIM54-202ENST00000380075 NANOGNBQ7Z5D8 188 aa19.57■□□□□ 0.72
TRIM54-202ENST00000380075 KCTD20Q7Z5Y7 419 aa19.57■□□□□ 0.72
TRIM54-202ENST00000380075 RPS4Y2Q8TD47 263 aa19.57■□□□□ 0.72
TRIM54-202ENST00000380075 KCNJ15Q99712 375 aa19.57■□□□□ 0.72
TRIM54-202ENST00000380075 VN1R1Q9GZP7 353 aa19.57■□□□□ 0.72
TRIM54-202ENST00000380075 WDR70Q9NW82 654 aa19.57■□□□□ 0.72
TRIM54-202ENST00000380075 RBFOX1Q9NWB1 397 aaKnown RBP19.57■□□□□ 0.72
TRIM54-202ENST00000380075 GNG8Q9UK08 70 aa19.57■□□□□ 0.72
TRIM54-202ENST00000380075 RASD1Q9Y272 281 aa19.57■□□□□ 0.72
TRIM54-202ENST00000380075 SPAARA0A1B0GVQ0 90 aa19.56■□□□□ 0.72
TRIM54-202ENST00000380075 A0A1W2PRG6 482 aa19.56■□□□□ 0.72
TRIM54-202ENST00000380075 MEIOCA2RUB1 952 aa19.56■□□□□ 0.72
TRIM54-202ENST00000380075 HCRTR2O43614 444 aa19.56■□□□□ 0.72
TRIM54-202ENST00000380075 NDUFB5O43674 189 aa19.56■□□□□ 0.72
TRIM54-202ENST00000380075 KRT8P05787 483 aa19.56■□□□□ 0.72
TRIM54-202ENST00000380075 UCHL1P09936 223 aa19.56■□□□□ 0.72
TRIM54-202ENST00000380075 ATXN8OSP0DMR3 200 aa19.56■□□□□ 0.72
TRIM54-202ENST00000380075 PGCP20142 388 aa19.56■□□□□ 0.72
TRIM54-202ENST00000380075 CDKN2AP42771 156 aaKnown RBP19.56■□□□□ 0.72
TRIM54-202ENST00000380075 HCCSP53701 268 aa19.56■□□□□ 0.72
TRIM54-202ENST00000380075 MRPL28Q13084 256 aaKnown RBP19.56■□□□□ 0.72
TRIM54-202ENST00000380075 CCDC157Q569K6 752 aa19.56■□□□□ 0.72
TRIM54-202ENST00000380075 FAM27D1Q5T7N8 215 aa19.56■□□□□ 0.72
TRIM54-202ENST00000380075 SLC6A19Q695T7 634 aa19.56■□□□□ 0.72
TRIM54-202ENST00000380075 PRR22Q8IZ63 422 aa19.56■□□□□ 0.72
TRIM54-202ENST00000380075 ZNF441Q8N8Z8 693 aa19.56■□□□□ 0.72
TRIM54-202ENST00000380075 EXD3Q8N9H8 876 aa19.56■□□□□ 0.72
TRIM54-202ENST00000380075 SCAIQ8N9R8 606 aa19.56■□□□□ 0.72
TRIM54-202ENST00000380075 LSM14AQ8ND56 463 aaKnown RBP19.56■□□□□ 0.72
TRIM54-202ENST00000380075 LPAR4Q99677 370 aa19.56■□□□□ 0.72
TRIM54-202ENST00000380075 ZCCHC4Q9H5U6 513 aa19.56■□□□□ 0.72
TRIM54-202ENST00000380075 ABRACLQ9P1F3 81 aa19.56■□□□□ 0.72
TRIM54-202ENST00000380075 MALT1Q9UDY8 824 aa19.56■□□□□ 0.72
TRIM54-202ENST00000380075 TRBV2A0A0J9YWF9 115 aa19.55■□□□□ 0.72
TRIM54-202ENST00000380075 DCDC2BA2VCK2 349 aa19.55■□□□□ 0.72
TRIM54-202ENST00000380075 NOTOA8MTQ0 251 aa19.55■□□□□ 0.72
TRIM54-202ENST00000380075 B4DXG7 233 aa19.55■□□□□ 0.72
TRIM54-202ENST00000380075 SELENOFO60613 162 aa19.55■□□□□ 0.72
TRIM54-202ENST00000380075 TMEM127O75204 238 aa19.55■□□□□ 0.72
TRIM54-202ENST00000380075 CXCR1P25024 350 aa19.55■□□□□ 0.72
TRIM54-202ENST00000380075 EDNRAP25101 427 aa19.55■□□□□ 0.72
TRIM54-202ENST00000380075 INPP1P49441 399 aa19.55■□□□□ 0.72
TRIM54-202ENST00000380075 NOVA1P51513 510 aaKnown RBP19.55■□□□□ 0.72
TRIM54-202ENST00000380075 EFNA3P52797 238 aa19.55■□□□□ 0.72
TRIM54-202ENST00000380075 QPRTQ15274 297 aa19.55■□□□□ 0.72
TRIM54-202ENST00000380075 SLC16A9Q7RTY1 509 aa19.55■□□□□ 0.72
TRIM54-202ENST00000380075 GLRX5Q86SX6 157 aa19.55■□□□□ 0.72
TRIM54-202ENST00000380075 DUSP18Q8NEJ0 188 aa19.55■□□□□ 0.72
TRIM54-202ENST00000380075 ZPLD1Q8TCW7 415 aa19.55■□□□□ 0.72
TRIM54-202ENST00000380075 NAT6Q93015 286 aa19.55■□□□□ 0.72
TRIM54-202ENST00000380075 OMA1Q96E52 524 aa19.55■□□□□ 0.72
TRIM54-202ENST00000380075 FRMD6Q96NE9 622 aa19.55■□□□□ 0.72
TRIM54-202ENST00000380075 MNTQ99583 582 aa19.55■□□□□ 0.72
TRIM54-202ENST00000380075 TBL1XR1Q9BZK7 514 aa19.55■□□□□ 0.72
TRIM54-202ENST00000380075 TGIF2Q9GZN2 237 aa19.55■□□□□ 0.72
TRIM54-202ENST00000380075 RNF121Q9H920 327 aa19.55■□□□□ 0.72
TRIM54-202ENST00000380075 MARCH7Q9H992 704 aa19.55■□□□□ 0.72
TRIM54-202ENST00000380075 GRHPRQ9UBQ7 328 aa19.55■□□□□ 0.72
TRIM54-202ENST00000380075 ZNF221Q9UK13 617 aa19.55■□□□□ 0.72
TRIM54-202ENST00000380075 MKL2Q9ULH7 1088 aa19.55■□□□□ 0.72
TRIM54-202ENST00000380075 COPS3Q9UNS2 423 aa19.55■□□□□ 0.72
TRIM54-202ENST00000380075 HMX3A6NHT5 357 aa19.55■□□□□ 0.72
TRIM54-202ENST00000380075 A8MU76 341 aa19.55■□□□□ 0.72
TRIM54-202ENST00000380075 CEACAM1P13688 526 aa19.55■□□□□ 0.72
TRIM54-202ENST00000380075 PNLIPP16233 465 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms