RNA–Protein interactions for RNA: ENST00000379989.6

CDKL5-201, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-201ENST00000379989 OR2A2Q6IF42 318 aa6.88□□□□□ -1.31
CDKL5-201ENST00000379989 TPRG1Q6ZUI0 275 aa6.88□□□□□ -1.31
CDKL5-201ENST00000379989 SLC36A1Q7Z2H8 476 aa6.88□□□□□ -1.31
CDKL5-201ENST00000379989 KLHDC8AQ8IYD2 350 aa6.88□□□□□ -1.31
CDKL5-201ENST00000379989 BPIFB2Q8N4F0 458 aa6.88□□□□□ -1.31
CDKL5-201ENST00000379989 FAM26EQ8N5C1 309 aa6.88□□□□□ -1.31
CDKL5-201ENST00000379989 PNLDC1Q8NA58 520 aaKnown RBP6.88□□□□□ -1.31
CDKL5-201ENST00000379989 FBXO15Q8NCQ5 510 aaPredicted RBP6.88□□□□□ -1.31
CDKL5-201ENST00000379989 OR10R2Q8NGX6 335 aa6.88□□□□□ -1.31
CDKL5-201ENST00000379989 C5orf34Q96MH7 638 aa6.88□□□□□ -1.31
CDKL5-201ENST00000379989 ORAI3Q9BRQ5 295 aa6.88□□□□□ -1.31
CDKL5-201ENST00000379989 THSD1Q9NS62 852 aa6.88□□□□□ -1.31
CDKL5-201ENST00000379989 ASB6Q9NWX5 421 aa6.88□□□□□ -1.31
CDKL5-201ENST00000379989 FAM50BQ9Y247 325 aa6.88□□□□□ -1.31
CDKL5-201ENST00000379989 STARD10Q9Y365 291 aa6.88□□□□□ -1.31
CDKL5-201ENST00000379989 PCDHB11Q9Y5F2 797 aa6.88□□□□□ -1.31
CDKL5-201ENST00000379989 BRCA2P51587 3418 aa6.88□□□□□ -1.31
CDKL5-201ENST00000379989 YLPM1P49750 1951 aaKnown RBP6.87□□□□□ -1.31
CDKL5-201ENST00000379989 RNF222A6NCQ9 220 aa6.87□□□□□ -1.31
CDKL5-201ENST00000379989 NAP1L6A6NFF2 107 aa6.87□□□□□ -1.31
CDKL5-201ENST00000379989 PYCARD-AS1I3L0S3 204 aa6.87□□□□□ -1.31
CDKL5-201ENST00000379989 NPC1O15118 1278 aa6.87□□□□□ -1.31
CDKL5-201ENST00000379989 TXNDC12O95881 172 aa6.87□□□□□ -1.31
CDKL5-201ENST00000379989 ARG1P05089 322 aa6.87□□□□□ -1.31
CDKL5-201ENST00000379989 GDI1P31150 447 aa6.87□□□□□ -1.31
CDKL5-201ENST00000379989 XCR1P46094 333 aa6.87□□□□□ -1.31
CDKL5-201ENST00000379989 CDKN1BP46527 198 aa6.87□□□□□ -1.31
CDKL5-201ENST00000379989 SLC10A1Q14973 349 aa6.87□□□□□ -1.31
CDKL5-201ENST00000379989 TCTN1Q2MV58 587 aa6.87□□□□□ -1.31
CDKL5-201ENST00000379989 GOLGA7Q7Z5G4 137 aa6.87□□□□□ -1.31
CDKL5-201ENST00000379989 TMEM173Q86WV6 379 aaPredicted RBP6.87□□□□□ -1.31
CDKL5-201ENST00000379989 MUC20Q8N307 709 aaPredicted RBP6.87□□□□□ -1.31
CDKL5-201ENST00000379989 KREMEN2Q8NCW0 462 aa6.87□□□□□ -1.31
CDKL5-201ENST00000379989 OR8J2Q8NGG1 315 aa6.87□□□□□ -1.31
CDKL5-201ENST00000379989 RFKQ969G6 155 aa6.87□□□□□ -1.31
CDKL5-201ENST00000379989 CHST8Q9H2A9 424 aa6.87□□□□□ -1.31
CDKL5-201ENST00000379989 OR52A5Q9H2C5 316 aa6.87□□□□□ -1.31
CDKL5-201ENST00000379989 ZFYVE1Q9HBF4 777 aa6.87□□□□□ -1.31
CDKL5-201ENST00000379989 LRTM1Q9HBL6 345 aa6.87□□□□□ -1.31
CDKL5-201ENST00000379989 ZNF230Q9UIE0 474 aaPredicted RBP6.87□□□□□ -1.31
CDKL5-201ENST00000379989 TNFSF18Q9UNG2 199 aa6.87□□□□□ -1.31
CDKL5-201ENST00000379989 CAMK2AQ9UQM7 478 aa6.87□□□□□ -1.31
CDKL5-201ENST00000379989 IGLV3-16A0A075B6K0 115 aa6.87□□□□□ -1.31
CDKL5-201ENST00000379989 OR5H15A6NDH6 313 aa6.87□□□□□ -1.31
CDKL5-201ENST00000379989 A6NJY4 79 aa6.87□□□□□ -1.31
CDKL5-201ENST00000379989 OR5H1A6NKK0 313 aa6.87□□□□□ -1.31
CDKL5-201ENST00000379989 FAM157AC9JC47 383 aa6.87□□□□□ -1.31
CDKL5-201ENST00000379989 RNASEK-C17orf49H0YIS7 233 aa6.87□□□□□ -1.31
CDKL5-201ENST00000379989 M0R143 59 aa6.87□□□□□ -1.31
CDKL5-201ENST00000379989 CTDSPLO15194 276 aa6.87□□□□□ -1.31
CDKL5-201ENST00000379989 OR2F2O95006 317 aa6.87□□□□□ -1.31
CDKL5-201ENST00000379989 NDUFB6O95139 128 aa6.87□□□□□ -1.31
CDKL5-201ENST00000379989 LRATO95237 230 aa6.87□□□□□ -1.31
CDKL5-201ENST00000379989 PLGP00747 810 aaPredicted RBP6.87□□□□□ -1.31
CDKL5-201ENST00000379989 METTL15P1P0C7V9 234 aa6.87□□□□□ -1.31
CDKL5-201ENST00000379989 FOSL2P15408 326 aa6.87□□□□□ -1.31
CDKL5-201ENST00000379989 CD46P15529 392 aa6.87□□□□□ -1.31
CDKL5-201ENST00000379989 TACR1P25103 407 aa6.87□□□□□ -1.31
CDKL5-201ENST00000379989 PPP2R1BP30154 601 aa6.87□□□□□ -1.31
CDKL5-201ENST00000379989 AGTR1P30556 359 aa6.87□□□□□ -1.31
CDKL5-201ENST00000379989 APLNRP35414 380 aa6.87□□□□□ -1.31
CDKL5-201ENST00000379989 THBS4P35443 961 aa6.87□□□□□ -1.31
CDKL5-201ENST00000379989 NSG1P42857 185 aa6.87□□□□□ -1.31
CDKL5-201ENST00000379989 ZNF84P51523 738 aa6.87□□□□□ -1.31
CDKL5-201ENST00000379989 RPS24P62847 133 aaKnown RBP6.87□□□□□ -1.31
CDKL5-201ENST00000379989 ZXDBP98169 803 aa6.87□□□□□ -1.31
CDKL5-201ENST00000379989 EFNB1P98172 346 aa6.87□□□□□ -1.31
CDKL5-201ENST00000379989 OR2F1Q13607 317 aa6.87□□□□□ -1.31
CDKL5-201ENST00000379989 PTPRNQ16849 979 aa6.87□□□□□ -1.31
CDKL5-201ENST00000379989 CFAP161Q6P656 301 aa6.87□□□□□ -1.31
CDKL5-201ENST00000379989 DHRS11Q6UWP2 260 aa6.87□□□□□ -1.31
CDKL5-201ENST00000379989 ZNF621Q6ZSS3 439 aa6.87□□□□□ -1.31
CDKL5-201ENST00000379989 ZNF765Q7L2R6 523 aa6.87□□□□□ -1.31
CDKL5-201ENST00000379989 LINGO2Q7L985 606 aa6.87□□□□□ -1.31
CDKL5-201ENST00000379989 NRROSQ86YC3 692 aa6.87□□□□□ -1.31
CDKL5-201ENST00000379989 RGL4Q8IZJ4 473 aa6.87□□□□□ -1.31
CDKL5-201ENST00000379989 OR4K2Q8NGD2 314 aa6.87□□□□□ -1.31
CDKL5-201ENST00000379989 OR1N1Q8NGS0 311 aa6.87□□□□□ -1.31
CDKL5-201ENST00000379989 C16orf78Q8WTQ4 265 aa6.87□□□□□ -1.31
CDKL5-201ENST00000379989 FGF11Q92914 225 aa6.87□□□□□ -1.31
CDKL5-201ENST00000379989 TSSK3Q96PN8 268 aa6.87□□□□□ -1.31
CDKL5-201ENST00000379989 PANX1Q96RD7 426 aa6.87□□□□□ -1.31
CDKL5-201ENST00000379989 INSM2Q96T92 566 aaPredicted RBP6.87□□□□□ -1.31
CDKL5-201ENST00000379989 MRI1Q9BV20 369 aa6.87□□□□□ -1.31
CDKL5-201ENST00000379989 FN3KRPQ9HA64 309 aa6.87□□□□□ -1.31
CDKL5-201ENST00000379989 PRODH2Q9UF12 536 aa6.87□□□□□ -1.31
CDKL5-201ENST00000379989 IL20RAQ9UHF4 553 aa6.87□□□□□ -1.31
CDKL5-201ENST00000379989 SCN8AQ9UQD0 1980 aa6.87□□□□□ -1.31
CDKL5-201ENST00000379989 A0A0D9SEW6 157 aa6.86□□□□□ -1.31
CDKL5-201ENST00000379989 ARRDC5A6NEK1 342 aa6.86□□□□□ -1.31
CDKL5-201ENST00000379989 GGT3PA6NGU5 568 aa6.86□□□□□ -1.31
CDKL5-201ENST00000379989 TP53I11O14683 189 aa6.86□□□□□ -1.31
CDKL5-201ENST00000379989 RGS9O75916 674 aaPredicted RBP6.86□□□□□ -1.31
CDKL5-201ENST00000379989 PRAMEF12O95522 483 aa6.86□□□□□ -1.31
CDKL5-201ENST00000379989 RLN1P04808 185 aa6.86□□□□□ -1.31
CDKL5-201ENST00000379989 SERPINA5P05154 406 aa6.86□□□□□ -1.31
CDKL5-201ENST00000379989 C8GP07360 202 aa6.86□□□□□ -1.31
CDKL5-201ENST00000379989 ACP2P11117 423 aa6.86□□□□□ -1.31
CDKL5-201ENST00000379989 FABP4P15090 132 aa6.86□□□□□ -1.31
CDKL5-201ENST00000379989 SKP1P63208 163 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms