RNA–Protein interactions for RNA: ENST00000378204.6

EXT1-201, Transcript of exostosin glycosyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXT1, Length 8,270 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXT1-201ENST00000378204 CACNA1SQ13698 1873 aa13.89□□□□□ -0.19
EXT1-201ENST00000378204 PHOX2AO14813 284 aa13.89□□□□□ -0.19
EXT1-201ENST00000378204 SLC43A1O75387 559 aa13.89□□□□□ -0.19
EXT1-201ENST00000378204 HLA-HP01893 362 aa13.89□□□□□ -0.19
EXT1-201ENST00000378204 CPMP14384 443 aa13.89□□□□□ -0.19
EXT1-201ENST00000378204 ACPPP15309 386 aa13.89□□□□□ -0.19
EXT1-201ENST00000378204 PRDX1Q06830 199 aaKnown RBP13.89□□□□□ -0.19
EXT1-201ENST00000378204 SLC5A12Q1EHB4 618 aa13.89□□□□□ -0.19
EXT1-201ENST00000378204 DEFB133Q30KQ1 61 aa13.89□□□□□ -0.19
EXT1-201ENST00000378204 ZNF765Q7L2R6 523 aa13.89□□□□□ -0.19
EXT1-201ENST00000378204 MTURNQ8N3F0 131 aa13.89□□□□□ -0.19
EXT1-201ENST00000378204 IL1F10Q8WWZ1 152 aa13.89□□□□□ -0.19
EXT1-201ENST00000378204 NKX2-4Q9H2Z4 354 aa13.89□□□□□ -0.19
EXT1-201ENST00000378204 RBFOX1Q9NWB1 397 aaKnown RBP13.89□□□□□ -0.19
EXT1-201ENST00000378204 NUDT21O43809 227 aaKnown RBP13.89□□□□□ -0.19
EXT1-201ENST00000378204 HLA-AP01891 365 aaKnown RBP13.89□□□□□ -0.19
EXT1-201ENST00000378204 POU3F2P20265 443 aaPredicted RBP13.89□□□□□ -0.19
EXT1-201ENST00000378204 P2RY14Q15391 338 aa13.89□□□□□ -0.19
EXT1-201ENST00000378204 TMEM130Q8N3G9 435 aa13.89□□□□□ -0.19
EXT1-201ENST00000378204 OR5K2Q8NHB8 316 aa13.89□□□□□ -0.19
EXT1-201ENST00000378204 ZNF582Q96NG8 517 aaPredicted RBP13.89□□□□□ -0.19
EXT1-201ENST00000378204 STEAP3Q658P3 488 aa13.89□□□□□ -0.19
EXT1-201ENST00000378204 C17orf99Q6UX52 265 aa13.89□□□□□ -0.19
EXT1-201ENST00000378204 OR8J2Q8NGG1 315 aa13.89□□□□□ -0.19
EXT1-201ENST00000378204 ZNF44P15621 663 aa13.88□□□□□ -0.19
EXT1-201ENST00000378204 SLC7A9P82251 487 aa13.88□□□□□ -0.19
EXT1-201ENST00000378204 EXTL1Q92935 676 aa13.88□□□□□ -0.19
EXT1-201ENST00000378204 KCTD12Q96CX2 325 aaKnown RBP13.88□□□□□ -0.19
EXT1-201ENST00000378204 TOE1Q96GM8 510 aaKnown RBP13.88□□□□□ -0.19
EXT1-201ENST00000378204 CSNK1G1Q9HCP0 422 aa13.88□□□□□ -0.19
EXT1-201ENST00000378204 GHRLQ9UBU3 117 aa13.88□□□□□ -0.19
EXT1-201ENST00000378204 TMEM269A0A1B0GVZ9 245 aa13.88□□□□□ -0.19
EXT1-201ENST00000378204 KDM4EB2RXH2 506 aaPredicted RBP13.88□□□□□ -0.19
EXT1-201ENST00000378204 OR6S1Q8NH40 331 aa13.88□□□□□ -0.19
EXT1-201ENST00000378204 SDSLQ96GA7 329 aa13.88□□□□□ -0.19
EXT1-201ENST00000378204 C3orf30Q96M34 536 aa13.88□□□□□ -0.19
EXT1-201ENST00000378204 C12orf10Q9HB07 376 aa13.88□□□□□ -0.19
EXT1-201ENST00000378204 CD207Q9UJ71 328 aa13.88□□□□□ -0.19
EXT1-201ENST00000378204 GALR3O60755 368 aaPredicted RBP13.88□□□□□ -0.19
EXT1-201ENST00000378204 MMP7P09237 267 aaPredicted RBP13.88□□□□□ -0.19
EXT1-201ENST00000378204 RAB5AP20339 215 aa13.88□□□□□ -0.19
EXT1-201ENST00000378204 LTBQ06643 244 aa13.88□□□□□ -0.19
EXT1-201ENST00000378204 EXOSC7Q15024 291 aaKnown RBP13.88□□□□□ -0.19
EXT1-201ENST00000378204 MRPL2Q5T653 305 aaKnown RBP13.88□□□□□ -0.19
EXT1-201ENST00000378204 PARS2Q7L3T8 475 aaKnown RBP13.88□□□□□ -0.19
EXT1-201ENST00000378204 CMTM3Q96MX0 182 aa13.88□□□□□ -0.19
EXT1-201ENST00000378204 CXXC1Q9P0U4 656 aaPredicted RBP13.88□□□□□ -0.19
EXT1-201ENST00000378204 RALYQ9UKM9 306 aaKnown RBP13.88□□□□□ -0.19
EXT1-201ENST00000378204 TRBV11-1A0A0K0K1C0 115 aa13.88□□□□□ -0.19
EXT1-201ENST00000378204 SLC39A11Q8N1S5 342 aa13.88□□□□□ -0.19
EXT1-201ENST00000378204 OR51B6Q9H340 312 aa13.88□□□□□ -0.19
EXT1-201ENST00000378204 EGLN3Q9H6Z9 239 aa13.88□□□□□ -0.19
EXT1-201ENST00000378204 ITGB4P16144 1822 aa13.88□□□□□ -0.19
EXT1-201ENST00000378204 LOC102724200A0A096LPH7 203 aaPredicted RBP13.88□□□□□ -0.19
EXT1-201ENST00000378204 TRAF3IP2O43734 574 aaPredicted RBP13.88□□□□□ -0.19
EXT1-201ENST00000378204 ICAM2P13598 275 aa13.88□□□□□ -0.19
EXT1-201ENST00000378204 HLA-DMAP28067 261 aa13.88□□□□□ -0.19
EXT1-201ENST00000378204 C21orf33P30042 268 aaPredicted RBP13.88□□□□□ -0.19
EXT1-201ENST00000378204 ZNF595Q8IYB9 648 aa13.88□□□□□ -0.19
EXT1-201ENST00000378204 ZFPM2Q8WW38 1151 aa13.88□□□□□ -0.19
EXT1-201ENST00000378204 NOX3Q9HBY0 568 aa13.88□□□□□ -0.19
EXT1-201ENST00000378204 PPP1R14DQ9NXH3 145 aa13.88□□□□□ -0.19
EXT1-201ENST00000378204 NSG1A0A0A6YYJ2 146 aa13.88□□□□□ -0.19
EXT1-201ENST00000378204 TRAPPC2LH3BP13 241 aa13.88□□□□□ -0.19
EXT1-201ENST00000378204 OR4F15Q8NGB8 312 aa13.88□□□□□ -0.19
EXT1-201ENST00000378204 RHBDD1Q8TEB9 315 aa13.88□□□□□ -0.19
EXT1-201ENST00000378204 PSMF1Q92530 271 aa13.88□□□□□ -0.19
EXT1-201ENST00000378204 FGF13Q92913 245 aa13.88□□□□□ -0.19
EXT1-201ENST00000378204 PKMYT1Q99640 499 aa13.88□□□□□ -0.19
EXT1-201ENST00000378204 BOKQ9UMX3 212 aaPredicted RBP13.88□□□□□ -0.19
EXT1-201ENST00000378204 PHIPQ8WWQ0 1821 aa13.88□□□□□ -0.19
EXT1-201ENST00000378204 M0R143 59 aa13.87□□□□□ -0.19
EXT1-201ENST00000378204 VASPP50552 380 aaPredicted RBP13.87□□□□□ -0.19
EXT1-201ENST00000378204 SEC61A1P61619 476 aaKnown RBP13.87□□□□□ -0.19
EXT1-201ENST00000378204 PDZD11Q5EBL8 140 aa13.87□□□□□ -0.19
EXT1-201ENST00000378204 YIPF5Q969M3 257 aa13.87□□□□□ -0.19
EXT1-201ENST00000378204 HHIPQ96QV1 700 aa13.87□□□□□ -0.19
EXT1-201ENST00000378204 AKAP11Q9UKA4 1901 aa13.87□□□□□ -0.19
EXT1-201ENST00000378204 BMP1P13497 986 aa13.87□□□□□ -0.19
EXT1-201ENST00000378204 MSMO1Q15800 293 aa13.87□□□□□ -0.19
EXT1-201ENST00000378204 KHSRPQ92945 711 aaKnown RBP eCLIP13.87□□□□□ -0.19
EXT1-201ENST00000378204 CASD1Q96PB1 797 aa13.87□□□□□ -0.19
EXT1-201ENST00000378204 MED18Q9BUE0 208 aa13.87□□□□□ -0.19
EXT1-201ENST00000378204 A0A1W2PPV4 95 aa13.87□□□□□ -0.19
EXT1-201ENST00000378204 APOOLQ6UXV4 268 aa13.87□□□□□ -0.19
EXT1-201ENST00000378204 PCED1AQ9H1Q7 454 aa13.87□□□□□ -0.19
EXT1-201ENST00000378204 ELOVL3Q9HB03 270 aa13.87□□□□□ -0.19
EXT1-201ENST00000378204 CHRNA9Q9UGM1 479 aa13.87□□□□□ -0.19
EXT1-201ENST00000378204 EMCNQ9ULC0 261 aa13.87□□□□□ -0.19
EXT1-201ENST00000378204 USP3Q9Y6I4 520 aa13.87□□□□□ -0.19
EXT1-201ENST00000378204 GPRIN2O60269 458 aa13.87□□□□□ -0.19
EXT1-201ENST00000378204 FUCA1P04066 466 aa13.87□□□□□ -0.19
EXT1-201ENST00000378204 S100A7P31151 101 aa13.87□□□□□ -0.19
EXT1-201ENST00000378204 ATP1B3P54709 279 aa13.87□□□□□ -0.19
EXT1-201ENST00000378204 C1orf198Q9H425 327 aa13.87□□□□□ -0.19
EXT1-201ENST00000378204 LIN7BQ9HAP6 207 aa13.87□□□□□ -0.19
EXT1-201ENST00000378204 TMEM212A6NML5 194 aa13.87□□□□□ -0.19
EXT1-201ENST00000378204 SERPINA2P20848 420 aa13.87□□□□□ -0.19
EXT1-201ENST00000378204 CHRNB4P30926 498 aa13.87□□□□□ -0.19
EXT1-201ENST00000378204 EEF1A2Q05639 463 aaKnown RBP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms