RNA–Protein interactions for RNA: ENST00000376656.8

TRIM39-201, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 2 BASIC

Gene TRIM39, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-201ENST00000376656 CAPN10Q9HC96 672 aa15.09■□□□□ 0.01
TRIM39-201ENST00000376656 ZNF230Q9UIE0 474 aaPredicted RBP15.09■□□□□ 0.01
TRIM39-201ENST00000376656 C19orf53Q9UNZ5 99 aaPredicted RBP15.09■□□□□ 0.01
TRIM39-201ENST00000376656 ZNF98A6NK75 572 aa15.09■□□□□ 0.01
TRIM39-201ENST00000376656 FGF18O76093 207 aa15.09■□□□□ 0.01
TRIM39-201ENST00000376656 NDUFB2O95178 105 aa15.09■□□□□ 0.01
TRIM39-201ENST00000376656 CPMP14384 443 aa15.09■□□□□ 0.01
TRIM39-201ENST00000376656 MAPK3P27361 379 aaPredicted RBP15.09■□□□□ 0.01
TRIM39-201ENST00000376656 RUNX2Q13950 521 aa15.09■□□□□ 0.01
TRIM39-201ENST00000376656 EXOSC7Q15024 291 aaKnown RBP15.09■□□□□ 0.01
TRIM39-201ENST00000376656 BOLLQ8N9W6 283 aaKnown RBP15.09■□□□□ 0.01
TRIM39-201ENST00000376656 NPEPL1Q8NDH3 523 aa15.09■□□□□ 0.01
TRIM39-201ENST00000376656 OR6N1Q8NGY5 312 aa15.09■□□□□ 0.01
TRIM39-201ENST00000376656 WFIKKN2Q8TEU8 576 aa15.09■□□□□ 0.01
TRIM39-201ENST00000376656 NARS2Q96I59 477 aaKnown RBP15.09■□□□□ 0.01
TRIM39-201ENST00000376656 WDR13Q9H1Z4 485 aa15.09■□□□□ 0.01
TRIM39-201ENST00000376656 RASL12Q9NYN1 266 aa15.09■□□□□ 0.01
TRIM39-201ENST00000376656 SLC6A5Q9Y345 797 aa15.09■□□□□ 0.01
TRIM39-201ENST00000376656 USP34Q70CQ2 3546 aa15.09■□□□□ 0.01
TRIM39-201ENST00000376656 C4orf47A7E2U8 309 aa15.09■□□□□ 0.01
TRIM39-201ENST00000376656 H0YC42 278 aa15.09■□□□□ 0.01
TRIM39-201ENST00000376656 MAS1P04201 325 aa15.09■□□□□ 0.01
TRIM39-201ENST00000376656 OR8G3PP0DMU2 310 aa15.09■□□□□ 0.01
TRIM39-201ENST00000376656 RPL35P42766 123 aaKnown RBP15.09■□□□□ 0.01
TRIM39-201ENST00000376656 EMDP50402 254 aa15.09■□□□□ 0.01
TRIM39-201ENST00000376656 DEFB134Q4QY38 66 aa15.09■□□□□ 0.01
TRIM39-201ENST00000376656 ALG10BQ5I7T1 473 aa15.09■□□□□ 0.01
TRIM39-201ENST00000376656 ZNF425Q6IV72 752 aa15.09■□□□□ 0.01
TRIM39-201ENST00000376656 ZSCAN2Q7Z7L9 614 aaPredicted RBP15.09■□□□□ 0.01
TRIM39-201ENST00000376656 LRRTM1Q86UE6 522 aa15.09■□□□□ 0.01
TRIM39-201ENST00000376656 DVL3Q92997 716 aaPredicted RBP15.09■□□□□ 0.01
TRIM39-201ENST00000376656 GAL3ST3Q96A11 431 aa15.09■□□□□ 0.01
TRIM39-201ENST00000376656 RASD2Q96D21 266 aa15.09■□□□□ 0.01
TRIM39-201ENST00000376656 VWCEQ96DN2 955 aa15.09■□□□□ 0.01
TRIM39-201ENST00000376656 ZNF426Q9BUY5 554 aa15.09■□□□□ 0.01
TRIM39-201ENST00000376656 SLC6A17Q9H1V8 727 aa15.09■□□□□ 0.01
TRIM39-201ENST00000376656 PURGQ9UJV8 347 aaKnown RBP15.09■□□□□ 0.01
TRIM39-201ENST00000376656 ETV7Q9Y603 341 aa15.09■□□□□ 0.01
TRIM39-201ENST00000376656 A0A1B0GTH9 108 aa15.08■□□□□ 0
TRIM39-201ENST00000376656 LRRC72A6NJI9 287 aa15.08■□□□□ 0
TRIM39-201ENST00000376656 RFPL4AA6NLU0 287 aa15.08■□□□□ 0
TRIM39-201ENST00000376656 RFPL4AL1F8VTS6 287 aa15.08■□□□□ 0
TRIM39-201ENST00000376656 EIF4E2O60573 245 aaKnown RBP15.08■□□□□ 0
TRIM39-201ENST00000376656 LDB3O75112 727 aa15.08■□□□□ 0
TRIM39-201ENST00000376656 ZNF254O75437 659 aa15.08■□□□□ 0
TRIM39-201ENST00000376656 RPL4P36578 427 aaKnown RBP15.08■□□□□ 0
TRIM39-201ENST00000376656 EFNB2P52799 333 aa15.08■□□□□ 0
TRIM39-201ENST00000376656 SP3Q02447 781 aa15.08■□□□□ 0
TRIM39-201ENST00000376656 TMEFF1Q8IYR6 380 aa15.08■□□□□ 0
TRIM39-201ENST00000376656 MRI1Q9BV20 369 aa15.08■□□□□ 0
TRIM39-201ENST00000376656 SLITRK2Q9H156 845 aa15.08■□□□□ 0
TRIM39-201ENST00000376656 APMAPQ9HDC9 416 aa15.08■□□□□ 0
TRIM39-201ENST00000376656 ENTPD2Q9Y5L3 495 aa15.08■□□□□ 0
TRIM39-201ENST00000376656 TRAV8-7A0A075B6U6 113 aa15.08■□□□□ 0
TRIM39-201ENST00000376656 XRCC3O43542 346 aa15.08■□□□□ 0
TRIM39-201ENST00000376656 SIGLEC6O43699 453 aa15.08■□□□□ 0
TRIM39-201ENST00000376656 GTF2F2P13984 249 aa15.08■□□□□ 0
TRIM39-201ENST00000376656 DDX6P26196 483 aaKnown RBP eCLIP15.08■□□□□ 0
TRIM39-201ENST00000376656 CMPK1P30085 196 aa15.08■□□□□ 0
TRIM39-201ENST00000376656 GABRA3P34903 492 aa15.08■□□□□ 0
TRIM39-201ENST00000376656 MPPED2Q15777 294 aa15.08■□□□□ 0
TRIM39-201ENST00000376656 OR8S1Q8NH09 359 aa15.08■□□□□ 0
TRIM39-201ENST00000376656 C15orf40Q8WUR7 153 aa15.08■□□□□ 0
TRIM39-201ENST00000376656 RAB11FIP5Q9BXF6 653 aa15.08■□□□□ 0
TRIM39-201ENST00000376656 C14orf105Q9NVL8 296 aa15.08■□□□□ 0
TRIM39-201ENST00000376656 INSL6Q9Y581 213 aa15.08■□□□□ 0
TRIM39-201ENST00000376656 MYO7AQ13402 2215 aa15.07■□□□□ 0
TRIM39-201ENST00000376656 ZNF860A6NHJ4 632 aa15.07■□□□□ 0
TRIM39-201ENST00000376656 ADH1AP07327 375 aa15.07■□□□□ 0
TRIM39-201ENST00000376656 UBBP0CG47 229 aa15.07■□□□□ 0
TRIM39-201ENST00000376656 UBCP0CG48 685 aaKnown RBP15.07■□□□□ 0
TRIM39-201ENST00000376656 MGMTP16455 207 aa15.07■□□□□ 0
TRIM39-201ENST00000376656 AKR1D1P51857 326 aa15.07■□□□□ 0
TRIM39-201ENST00000376656 RPS27AP62979 156 aaKnown RBP15.07■□□□□ 0
TRIM39-201ENST00000376656 UBA52P62987 128 aaKnown RBP15.07■□□□□ 0
TRIM39-201ENST00000376656 Q499Y3 187 aa15.07■□□□□ 0
TRIM39-201ENST00000376656 ZNF546Q86UE3 836 aa15.07■□□□□ 0
TRIM39-201ENST00000376656 OR5T2Q8NGG2 359 aa15.07■□□□□ 0
TRIM39-201ENST00000376656 OR8K3Q8NH51 312 aa15.07■□□□□ 0
TRIM39-201ENST00000376656 EXO5Q9H790 373 aa15.07■□□□□ 0
TRIM39-201ENST00000376656 MKI67P46013 3256 aaKnown RBP15.07■□□□□ 0
TRIM39-201ENST00000376656 ABHD14A-ACY1A0A1B0GW23 586 aa15.07■□□□□ 0
TRIM39-201ENST00000376656 SMAD9O15198 467 aaKnown RBP15.07■□□□□ 0
TRIM39-201ENST00000376656 EGFP01133 1207 aa15.07■□□□□ 0
TRIM39-201ENST00000376656 ZNF234Q14588 700 aa15.07■□□□□ 0
TRIM39-201ENST00000376656 LY6G6FQ5SQ64 297 aa15.07■□□□□ 0
TRIM39-201ENST00000376656 ZNF684Q5T5D7 378 aa15.07■□□□□ 0
TRIM39-201ENST00000376656 ZNF511Q8NB15 262 aa15.07■□□□□ 0
TRIM39-201ENST00000376656 PXYLP1Q8TE99 480 aa15.07■□□□□ 0
TRIM39-201ENST00000376656 PRDM9Q9NQV7 894 aa15.07■□□□□ 0
TRIM39-201ENST00000376656 DUSP22Q9NRW4 184 aa15.07■□□□□ 0
TRIM39-201ENST00000376656 KLHDC2Q9Y2U9 406 aa15.07■□□□□ 0
TRIM39-201ENST00000376656 C5orf42Q9H799 3197 aa15.07■□□□□ 0
TRIM39-201ENST00000376656 BRINP1O60477 761 aa15.07■□□□□ 0
TRIM39-201ENST00000376656 CD3DP04234 171 aa15.07■□□□□ 0
TRIM39-201ENST00000376656 CSF1P09603 554 aa15.07■□□□□ 0
TRIM39-201ENST00000376656 ACAA2P42765 397 aaKnown RBP15.07■□□□□ 0
TRIM39-201ENST00000376656 FGL1Q08830 312 aa15.07■□□□□ 0
TRIM39-201ENST00000376656 KCNAB1Q14722 419 aa15.07■□□□□ 0
TRIM39-201ENST00000376656 EXOSC6Q5RKV6 272 aaKnown RBP15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms