RNA–Protein interactions for RNA: ENST00000375692.5

CLCNKA-202, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-202ENST00000375692 OR14A16Q8NHC5 309 aa12.91□□□□□ -0.34
CLCNKA-202ENST00000375692 HLA-CQ95604 372 aa12.91□□□□□ -0.34
CLCNKA-202ENST00000375692 RASD2Q96D21 266 aa12.91□□□□□ -0.34
CLCNKA-202ENST00000375692 OR2A7Q96R45 310 aa12.91□□□□□ -0.34
CLCNKA-202ENST00000375692 SERINC2Q96SA4 455 aa12.91□□□□□ -0.34
CLCNKA-202ENST00000375692 GINS4Q9BRT9 223 aa12.91□□□□□ -0.34
CLCNKA-202ENST00000375692 SHARPINQ9H0F6 387 aa12.91□□□□□ -0.34
CLCNKA-202ENST00000375692 DUSP22Q9NRW4 184 aa12.91□□□□□ -0.34
CLCNKA-202ENST00000375692 KLF15Q9UIH9 416 aa12.91□□□□□ -0.34
CLCNKA-202ENST00000375692 SLC22A7Q9Y694 548 aa12.91□□□□□ -0.34
CLCNKA-202ENST00000375692 CACNA1CQ13936 2221 aa12.9□□□□□ -0.34
CLCNKA-202ENST00000375692 A0A1W2PQF6 199 aa12.9□□□□□ -0.34
CLCNKA-202ENST00000375692 SLC22A23A1A5C7 686 aa12.9□□□□□ -0.34
CLCNKA-202ENST00000375692 ANXA2P2A6NMY6 339 aa12.9□□□□□ -0.34
CLCNKA-202ENST00000375692 CPN1P15169 458 aa12.9□□□□□ -0.34
CLCNKA-202ENST00000375692 H2BFSP57053 126 aa12.9□□□□□ -0.34
CLCNKA-202ENST00000375692 SEC61A1P61619 476 aaKnown RBP12.9□□□□□ -0.34
CLCNKA-202ENST00000375692 RPS15AP62244 130 aaKnown RBP12.9□□□□□ -0.34
CLCNKA-202ENST00000375692 NDUFAF6Q330K2 333 aa12.9□□□□□ -0.34
CLCNKA-202ENST00000375692 DGAT2L6Q6ZPD8 337 aa12.9□□□□□ -0.34
CLCNKA-202ENST00000375692 POMGNT2Q8NAT1 580 aa12.9□□□□□ -0.34
CLCNKA-202ENST00000375692 RNF166Q96A37 237 aaPredicted RBP12.9□□□□□ -0.34
CLCNKA-202ENST00000375692 OR2A5Q96R48 311 aa12.9□□□□□ -0.34
CLCNKA-202ENST00000375692 RSPH9Q9H1X1 276 aaPredicted RBP12.9□□□□□ -0.34
CLCNKA-202ENST00000375692 FBXL3Q9UKT7 428 aa12.9□□□□□ -0.34
CLCNKA-202ENST00000375692 ZNF281Q9Y2X9 895 aa12.9□□□□□ -0.34
CLCNKA-202ENST00000375692 FXYD6-FXYD2A0A087WZ82 144 aa12.9□□□□□ -0.34
CLCNKA-202ENST00000375692 A0A1B0GTH9 108 aa12.9□□□□□ -0.34
CLCNKA-202ENST00000375692 TUBAL3A6NHL2 446 aa12.9□□□□□ -0.34
CLCNKA-202ENST00000375692 PRR19A6NJB7 356 aa12.9□□□□□ -0.34
CLCNKA-202ENST00000375692 NDUFB6O95139 128 aa12.9□□□□□ -0.34
CLCNKA-202ENST00000375692 NDUFB2O95178 105 aa12.9□□□□□ -0.34
CLCNKA-202ENST00000375692 FOSL2P15408 326 aa12.9□□□□□ -0.34
CLCNKA-202ENST00000375692 SPI1P17947 270 aa12.9□□□□□ -0.34
CLCNKA-202ENST00000375692 ADRA2CP18825 462 aa12.9□□□□□ -0.34
CLCNKA-202ENST00000375692 C4BPBP20851 252 aa12.9□□□□□ -0.34
CLCNKA-202ENST00000375692 NTSR1P30989 418 aa12.9□□□□□ -0.34
CLCNKA-202ENST00000375692 S100A11P31949 105 aa12.9□□□□□ -0.34
CLCNKA-202ENST00000375692 TAS2R20P59543 309 aa12.9□□□□□ -0.34
CLCNKA-202ENST00000375692 ERVK-25P63136 954 aa12.9□□□□□ -0.34
CLCNKA-202ENST00000375692 BAMBIQ13145 260 aa12.9□□□□□ -0.34
CLCNKA-202ENST00000375692 TMEM31Q5JXX7 168 aa12.9□□□□□ -0.34
CLCNKA-202ENST00000375692 OLFML2AQ68BL7 652 aa12.9□□□□□ -0.34
CLCNKA-202ENST00000375692 FAM122CQ6P4D5 195 aa12.9□□□□□ -0.34
CLCNKA-202ENST00000375692 CFAP77Q6ZQR2 320 aa12.9□□□□□ -0.34
CLCNKA-202ENST00000375692 TMUB2Q71RG4 321 aa12.9□□□□□ -0.34
CLCNKA-202ENST00000375692 RD3Q7Z3Z2 195 aa12.9□□□□□ -0.34
CLCNKA-202ENST00000375692 SAMD14Q8IZD0 417 aaPredicted RBP12.9□□□□□ -0.34
CLCNKA-202ENST00000375692 ZNF511Q8NB15 262 aa12.9□□□□□ -0.34
CLCNKA-202ENST00000375692 NPEPL1Q8NDH3 523 aa12.9□□□□□ -0.34
CLCNKA-202ENST00000375692 ZDHHC1Q8WTX9 485 aa12.9□□□□□ -0.34
CLCNKA-202ENST00000375692 CMTM3Q96MX0 182 aa12.9□□□□□ -0.34
CLCNKA-202ENST00000375692 ARL6Q9H0F7 186 aa12.9□□□□□ -0.34
CLCNKA-202ENST00000375692 FXYD6Q9H0Q3 95 aa12.9□□□□□ -0.34
CLCNKA-202ENST00000375692 GPR89AB7ZAQ6 455 aa12.89□□□□□ -0.35
CLCNKA-202ENST00000375692 PDCD5O14737 125 aa12.89□□□□□ -0.35
CLCNKA-202ENST00000375692 GPR89BP0CG08 455 aa12.89□□□□□ -0.35
CLCNKA-202ENST00000375692 SMIM10L1P0DMW3 83 aa12.89□□□□□ -0.35
CLCNKA-202ENST00000375692 ICAM2P13598 275 aa12.89□□□□□ -0.35
CLCNKA-202ENST00000375692 SGCGQ13326 291 aa12.89□□□□□ -0.35
CLCNKA-202ENST00000375692 FAM53BQ14153 422 aa12.89□□□□□ -0.35
CLCNKA-202ENST00000375692 EXOSC6Q5RKV6 272 aaKnown RBP12.89□□□□□ -0.35
CLCNKA-202ENST00000375692 KIRREL2Q6UWL6 708 aa12.89□□□□□ -0.35
CLCNKA-202ENST00000375692 DEFB123Q8N688 67 aa12.89□□□□□ -0.35
CLCNKA-202ENST00000375692 OR4D10Q8NGI6 311 aa12.89□□□□□ -0.35
CLCNKA-202ENST00000375692 SMIM10Q96HG1 83 aa12.89□□□□□ -0.35
CLCNKA-202ENST00000375692 TSSK2Q96PF2 358 aa12.89□□□□□ -0.35
CLCNKA-202ENST00000375692 ZNF426Q9BUY5 554 aa12.89□□□□□ -0.35
CLCNKA-202ENST00000375692 GPN1Q9HCN4 374 aaPredicted RBP12.89□□□□□ -0.35
CLCNKA-202ENST00000375692 FGF22Q9HCT0 170 aa12.89□□□□□ -0.35
CLCNKA-202ENST00000375692 FBXL2Q9UKC9 423 aa12.89□□□□□ -0.35
CLCNKA-202ENST00000375692 SLC17A4Q9Y2C5 497 aa12.89□□□□□ -0.35
CLCNKA-202ENST00000375692 ENTPD2Q9Y5L3 495 aa12.89□□□□□ -0.35
CLCNKA-202ENST00000375692 GON4LQ3T8J9 2241 aa12.89□□□□□ -0.35
CLCNKA-202ENST00000375692 SIGLEC5O15389 551 aa12.89□□□□□ -0.35
CLCNKA-202ENST00000375692 RLN1P04808 185 aa12.89□□□□□ -0.35
CLCNKA-202ENST00000375692 HIST1H2ABP04908 130 aa12.89□□□□□ -0.35
CLCNKA-202ENST00000375692 OR8G3PP0DMU2 310 aa12.89□□□□□ -0.35
CLCNKA-202ENST00000375692 ITPKBP27987 946 aa12.89□□□□□ -0.35
CLCNKA-202ENST00000375692 ART1P52961 327 aa12.89□□□□□ -0.35
CLCNKA-202ENST00000375692 SIGLEC14Q08ET2 396 aa12.89□□□□□ -0.35
CLCNKA-202ENST00000375692 MGAT2Q10469 447 aa12.89□□□□□ -0.35
CLCNKA-202ENST00000375692 SRSF5Q13243 272 aaKnown RBP12.89□□□□□ -0.35
CLCNKA-202ENST00000375692 GGTLC2Q14390 218 aa12.89□□□□□ -0.35
CLCNKA-202ENST00000375692 PRICKLE4Q2TBC4 344 aa12.89□□□□□ -0.35
CLCNKA-202ENST00000375692 DCAF12L2Q5VW00 463 aa12.89□□□□□ -0.35
CLCNKA-202ENST00000375692 OR7E24Q6IFN5 339 aa12.89□□□□□ -0.35
CLCNKA-202ENST00000375692 STAC2Q6ZMT1 411 aa12.89□□□□□ -0.35
CLCNKA-202ENST00000375692 HIST3H2AQ7L7L0 130 aa12.89□□□□□ -0.35
CLCNKA-202ENST00000375692 ESX1Q8N693 406 aa12.89□□□□□ -0.35
CLCNKA-202ENST00000375692 CCL4L1Q8NHW4 92 aa12.89□□□□□ -0.35
CLCNKA-202ENST00000375692 NT5CQ8TCD5 201 aa12.89□□□□□ -0.35
CLCNKA-202ENST00000375692 HIST1H2ACQ93077 130 aa12.89□□□□□ -0.35
CLCNKA-202ENST00000375692 Q96M85 177 aa12.89□□□□□ -0.35
CLCNKA-202ENST00000375692 AIFM2Q9BRQ8 373 aa12.89□□□□□ -0.35
CLCNKA-202ENST00000375692 DNAJB12Q9NXW2 375 aaKnown RBP12.89□□□□□ -0.35
CLCNKA-202ENST00000375692 SLC31A1O15431 190 aa12.88□□□□□ -0.35
CLCNKA-202ENST00000375692 GPRIN2O60269 458 aa12.88□□□□□ -0.35
CLCNKA-202ENST00000375692 ITGA10O75578 1167 aa12.88□□□□□ -0.35
CLCNKA-202ENST00000375692 IGKV1D-16P01601 117 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms