RNA–Protein interactions for RNA: ENST00000375340.10

SMC1A-202, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 1 (best) BASIC

Gene SMC1A, Length 9,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-202ENST00000375340 MAFIPQ8WZ33 124 aa6.03□□□□□ -1.44
SMC1A-202ENST00000375340 OR51B6Q9H340 312 aa6.03□□□□□ -1.44
SMC1A-202ENST00000375340 ACKR4Q9NPB9 350 aa6.03□□□□□ -1.44
SMC1A-202ENST00000375340 EMC9Q9Y3B6 208 aa6.03□□□□□ -1.44
SMC1A-202ENST00000375340 TEX51A0A1B0GUA7 166 aa6.03□□□□□ -1.44
SMC1A-202ENST00000375340 TMEM82A0PJX8 343 aa6.03□□□□□ -1.44
SMC1A-202ENST00000375340 MED6O75586 246 aa6.03□□□□□ -1.44
SMC1A-202ENST00000375340 PSMB1P20618 241 aaKnown RBP6.03□□□□□ -1.44
SMC1A-202ENST00000375340 GLP1RP43220 463 aa6.03□□□□□ -1.44
SMC1A-202ENST00000375340 TAS2R19P59542 299 aa6.03□□□□□ -1.44
SMC1A-202ENST00000375340 PLGLB1Q02325 96 aa6.03□□□□□ -1.44
SMC1A-202ENST00000375340 SLC22A6Q4U2R8 563 aa6.03□□□□□ -1.44
SMC1A-202ENST00000375340 BEND4Q6ZU67 534 aa6.03□□□□□ -1.44
SMC1A-202ENST00000375340 RFPL4BQ6ZWI9 263 aa6.03□□□□□ -1.44
SMC1A-202ENST00000375340 RNF113BQ8IZP6 322 aaKnown RBP6.03□□□□□ -1.44
SMC1A-202ENST00000375340 FAM26EQ8N5C1 309 aa6.03□□□□□ -1.44
SMC1A-202ENST00000375340 ADAMTS14Q8WXS8 1223 aa6.03□□□□□ -1.44
SMC1A-202ENST00000375340 ARL11Q969Q4 196 aa6.03□□□□□ -1.44
SMC1A-202ENST00000375340 TOE1Q96GM8 510 aaKnown RBP6.03□□□□□ -1.44
SMC1A-202ENST00000375340 DCLRE1CQ96SD1 692 aaKnown RBP6.03□□□□□ -1.44
SMC1A-202ENST00000375340 OR10A5Q9H207 317 aa6.03□□□□□ -1.44
SMC1A-202ENST00000375340 CAMK2AQ9UQM7 478 aa6.03□□□□□ -1.44
SMC1A-202ENST00000375340 RP1L1Q8IWN7 2480 aaPredicted RBP6.03□□□□□ -1.44
SMC1A-202ENST00000375340 VSTM2BA6NLU5 285 aa6.03□□□□□ -1.44
SMC1A-202ENST00000375340 SEC14L5O43304 696 aa6.03□□□□□ -1.44
SMC1A-202ENST00000375340 PAPLNO95428 1278 aa6.03□□□□□ -1.44
SMC1A-202ENST00000375340 GPANK1O95872 356 aa6.03□□□□□ -1.44
SMC1A-202ENST00000375340 PXT1Q8NFP0 134 aa6.03□□□□□ -1.44
SMC1A-202ENST00000375340 OR10K1Q8NGX5 313 aa6.03□□□□□ -1.44
SMC1A-202ENST00000375340 STK35Q8TDR2 534 aa6.03□□□□□ -1.44
SMC1A-202ENST00000375340 C6orf106Q9H6K1 298 aaPredicted RBP6.03□□□□□ -1.44
SMC1A-202ENST00000375340 TAS2R4Q9NYW5 299 aa6.03□□□□□ -1.44
SMC1A-202ENST00000375340 SLC35A3Q9Y2D2 325 aa6.03□□□□□ -1.44
SMC1A-202ENST00000375340 RHBDD3Q9Y3P4 386 aa6.03□□□□□ -1.44
SMC1A-202ENST00000375340 SERINC4A6NH21 518 aa6.03□□□□□ -1.44
SMC1A-202ENST00000375340 WISP3O95389 354 aaPredicted RBP6.03□□□□□ -1.44
SMC1A-202ENST00000375340 LUMP51884 338 aaPredicted RBP6.03□□□□□ -1.44
SMC1A-202ENST00000375340 MEP1BQ16820 701 aa6.03□□□□□ -1.44
SMC1A-202ENST00000375340 TOR2AQ5JU69 321 aa6.03□□□□□ -1.44
SMC1A-202ENST00000375340 DPY19L4Q7Z388 723 aa6.03□□□□□ -1.44
SMC1A-202ENST00000375340 ZNF679Q8IYX0 411 aa6.03□□□□□ -1.44
SMC1A-202ENST00000375340 TMEM156Q8N614 296 aa6.03□□□□□ -1.44
SMC1A-202ENST00000375340 FOXRED1Q96CU9 486 aaPredicted RBP6.03□□□□□ -1.44
SMC1A-202ENST00000375340 SORCS2Q96PQ0 1159 aa6.03□□□□□ -1.44
SMC1A-202ENST00000375340 LYSMD1Q96S90 227 aa6.03□□□□□ -1.44
SMC1A-202ENST00000375340 SULT4A1Q9BR01 284 aa6.03□□□□□ -1.44
SMC1A-202ENST00000375340 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.03□□□□□ -1.44
SMC1A-202ENST00000375340 DZANK1Q9NVP4 752 aa6.03□□□□□ -1.44
SMC1A-202ENST00000375340 V9GYH0 126 aa6.03□□□□□ -1.44
SMC1A-202ENST00000375340 PDGFAP04085 211 aa6.03□□□□□ -1.44
SMC1A-202ENST00000375340 OR2T7P0C7T2 308 aa6.03□□□□□ -1.44
SMC1A-202ENST00000375340 NUDT1P36639 197 aa6.03□□□□□ -1.44
SMC1A-202ENST00000375340 EXOSC2Q13868 293 aaKnown RBP6.03□□□□□ -1.44
SMC1A-202ENST00000375340 NFATC4Q14934 902 aa6.03□□□□□ -1.44
SMC1A-202ENST00000375340 DUSP6Q16828 381 aa6.03□□□□□ -1.44
SMC1A-202ENST00000375340 ARHGAP11BQ3KRB8 267 aa6.03□□□□□ -1.44
SMC1A-202ENST00000375340 BPIFB2Q8N4F0 458 aa6.03□□□□□ -1.44
SMC1A-202ENST00000375340 OR2T27Q8NH04 317 aa6.03□□□□□ -1.44
SMC1A-202ENST00000375340 TEAD3Q99594 435 aa6.03□□□□□ -1.44
SMC1A-202ENST00000375340 NIPAL2Q9H841 368 aa6.03□□□□□ -1.44
SMC1A-202ENST00000375340 TBC1D29Q9UFV1 150 aa6.03□□□□□ -1.44
SMC1A-202ENST00000375340 FAM230AA0A1W2PPH8 454 aa6.03□□□□□ -1.44
SMC1A-202ENST00000375340 DUX1O43812 170 aa6.03□□□□□ -1.44
SMC1A-202ENST00000375340 TDGQ13569 410 aa6.03□□□□□ -1.44
SMC1A-202ENST00000375340 CD276Q5ZPR3 534 aa6.03□□□□□ -1.44
SMC1A-202ENST00000375340 OR6F1Q8NGZ6 308 aa6.03□□□□□ -1.44
SMC1A-202ENST00000375340 CCL4L1Q8NHW4 92 aa6.03□□□□□ -1.44
SMC1A-202ENST00000375340 MR1Q95460 341 aa6.03□□□□□ -1.44
SMC1A-202ENST00000375340 PNPLA2Q96AD5 504 aa6.03□□□□□ -1.44
SMC1A-202ENST00000375340 CTNSO60931 367 aa6.03□□□□□ -1.44
SMC1A-202ENST00000375340 WDPCPO95876 746 aa6.03□□□□□ -1.44
SMC1A-202ENST00000375340 EBPQ15125 230 aaKnown RBP6.03□□□□□ -1.44
SMC1A-202ENST00000375340 SLC6A19Q695T7 634 aa6.03□□□□□ -1.44
SMC1A-202ENST00000375340 ABI3BPQ7Z7G0 1075 aa6.03□□□□□ -1.44
SMC1A-202ENST00000375340 ZNF454Q8N9F8 522 aa6.03□□□□□ -1.44
SMC1A-202ENST00000375340 C19orf47Q8N9M1 422 aaKnown RBP6.03□□□□□ -1.44
SMC1A-202ENST00000375340 THRSPQ92748 146 aa6.03□□□□□ -1.44
SMC1A-202ENST00000375340 EPHX3Q9H6B9 360 aa6.03□□□□□ -1.44
SMC1A-202ENST00000375340 GREB1Q4ZG55 1949 aa6.02□□□□□ -1.44
SMC1A-202ENST00000375340 PPM1DO15297 605 aa6.02□□□□□ -1.44
SMC1A-202ENST00000375340 RAF1P04049 648 aa6.02□□□□□ -1.44
SMC1A-202ENST00000375340 RAB5BP61020 215 aa6.02□□□□□ -1.44
SMC1A-202ENST00000375340 IFITM3Q01628 133 aa6.02□□□□□ -1.44
SMC1A-202ENST00000375340 DAZLQ92904 295 aaKnown RBP6.02□□□□□ -1.44
SMC1A-202ENST00000375340 MAP6Q96JE9 813 aa6.02□□□□□ -1.44
SMC1A-202ENST00000375340 ING1Q9UK53 422 aaPredicted RBP6.02□□□□□ -1.44
SMC1A-202ENST00000375340 CASP8AP2Q9UKL3 1982 aa6.02□□□□□ -1.45
SMC1A-202ENST00000375340 DAP3P51398 398 aaKnown RBP6.02□□□□□ -1.45
SMC1A-202ENST00000375340 GNMTQ14749 295 aa6.02□□□□□ -1.45
SMC1A-202ENST00000375340 ZNF674Q2M3X9 581 aa6.02□□□□□ -1.45
SMC1A-202ENST00000375340 ABHD12BQ7Z5M8 362 aaPredicted RBP6.02□□□□□ -1.45
SMC1A-202ENST00000375340 ADGRF3Q8IZF5 1079 aa6.02□□□□□ -1.45
SMC1A-202ENST00000375340 OR4D6Q8NGJ1 314 aa6.02□□□□□ -1.45
SMC1A-202ENST00000375340 TMEM106AQ96A25 262 aa6.02□□□□□ -1.45
SMC1A-202ENST00000375340 SLC25A19Q9HC21 320 aa6.02□□□□□ -1.45
SMC1A-202ENST00000375340 TMEM212A6NML5 194 aa6.02□□□□□ -1.45
SMC1A-202ENST00000375340 HTR2CP28335 458 aa6.02□□□□□ -1.45
SMC1A-202ENST00000375340 EVX1P49640 407 aa6.02□□□□□ -1.45
SMC1A-202ENST00000375340 GLO1Q04760 184 aa6.02□□□□□ -1.45
SMC1A-202ENST00000375340 PPA1Q15181 289 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms