RNA–Protein interactions for RNA: ENST00000375299.7

UPF3A-202, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF3A, Length 2,387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-202ENST00000375299 NDUFA2O43678 99 aa19.33■□□□□ 0.69
UPF3A-202ENST00000375299 RBBP9O75884 186 aa19.33■□□□□ 0.69
UPF3A-202ENST00000375299 ITPKBP27987 946 aa19.33■□□□□ 0.69
UPF3A-202ENST00000375299 GRPRP30550 384 aa19.33■□□□□ 0.69
UPF3A-202ENST00000375299 RPL4P36578 427 aaKnown RBP19.33■□□□□ 0.69
UPF3A-202ENST00000375299 FGL2Q14314 439 aa19.33■□□□□ 0.69
UPF3A-202ENST00000375299 LRFN4Q6PJG9 635 aa19.33■□□□□ 0.69
UPF3A-202ENST00000375299 LINC00114Q6XXX2 140 aa19.33■□□□□ 0.69
UPF3A-202ENST00000375299 PAWRQ96IZ0 340 aaKnown RBP19.33■□□□□ 0.69
UPF3A-202ENST00000375299 TRPV4Q9HBA0 871 aa19.33■□□□□ 0.69
UPF3A-202ENST00000375299 A0A087WV48 116 aa19.33■□□□□ 0.68
UPF3A-202ENST00000375299 OR6C68A6NDL8 312 aa19.33■□□□□ 0.68
UPF3A-202ENST00000375299 H7C417 338 aa19.33■□□□□ 0.68
UPF3A-202ENST00000375299 RLN1P04808 185 aa19.33■□□□□ 0.68
UPF3A-202ENST00000375299 FCER2P06734 321 aa19.33■□□□□ 0.68
UPF3A-202ENST00000375299 ADRA2CP18825 462 aa19.33■□□□□ 0.68
UPF3A-202ENST00000375299 GMFBP60983 142 aa19.33■□□□□ 0.68
UPF3A-202ENST00000375299 UBE2MP61081 183 aaKnown RBP19.33■□□□□ 0.68
UPF3A-202ENST00000375299 Q499Y3 187 aa19.33■□□□□ 0.68
UPF3A-202ENST00000375299 OR10Z1Q8NGY1 313 aa19.33■□□□□ 0.68
UPF3A-202ENST00000375299 MRPS24Q96EL2 167 aaKnown RBP19.33■□□□□ 0.68
UPF3A-202ENST00000375299 NMNAT2Q9BZQ4 307 aa19.33■□□□□ 0.68
UPF3A-202ENST00000375299 DNAJB12Q9NXW2 375 aaKnown RBP19.33■□□□□ 0.68
UPF3A-202ENST00000375299 MTFP1Q9UDX5 166 aa19.33■□□□□ 0.68
UPF3A-202ENST00000375299 A0A1B0GVT2 93 aa19.32■□□□□ 0.68
UPF3A-202ENST00000375299 FGF17O60258 216 aa19.32■□□□□ 0.68
UPF3A-202ENST00000375299 HPP00738 406 aa19.32■□□□□ 0.68
UPF3A-202ENST00000375299 PRKACAP17612 351 aa19.32■□□□□ 0.68
UPF3A-202ENST00000375299 LTBQ06643 244 aa19.32■□□□□ 0.68
UPF3A-202ENST00000375299 ETFDHQ16134 617 aa19.32■□□□□ 0.68
UPF3A-202ENST00000375299 ZNF684Q5T5D7 378 aa19.32■□□□□ 0.68
UPF3A-202ENST00000375299 DCAF12L2Q5VW00 463 aa19.32■□□□□ 0.68
UPF3A-202ENST00000375299 SLC6A19Q695T7 634 aa19.32■□□□□ 0.68
UPF3A-202ENST00000375299 FBXO42Q6P3S6 717 aa19.32■□□□□ 0.68
UPF3A-202ENST00000375299 DPY19L2P2Q6ZN68 376 aa19.32■□□□□ 0.68
UPF3A-202ENST00000375299 OR6K3Q8NGY3 331 aa19.32■□□□□ 0.68
UPF3A-202ENST00000375299 LCN9Q8WX39 176 aa19.32■□□□□ 0.68
UPF3A-202ENST00000375299 SMARCD2Q92925 531 aa19.32■□□□□ 0.68
UPF3A-202ENST00000375299 TM4SF19Q96DZ7 209 aa19.32■□□□□ 0.68
UPF3A-202ENST00000375299 ZNF860A6NHJ4 632 aa19.32■□□□□ 0.68
UPF3A-202ENST00000375299 GNB5O14775 395 aa19.32■□□□□ 0.68
UPF3A-202ENST00000375299 KCNJ13O60928 360 aa19.32■□□□□ 0.68
UPF3A-202ENST00000375299 MELKQ14680 651 aa19.32■□□□□ 0.68
UPF3A-202ENST00000375299 PRICKLE4Q2TBC4 344 aa19.32■□□□□ 0.68
UPF3A-202ENST00000375299 MUC20Q8N307 709 aaPredicted RBP19.32■□□□□ 0.68
UPF3A-202ENST00000375299 GPR174Q9BXC1 333 aa19.32■□□□□ 0.68
UPF3A-202ENST00000375299 MKKSQ9NPJ1 570 aaPredicted RBP19.32■□□□□ 0.68
UPF3A-202ENST00000375299 SLC17A4Q9Y2C5 497 aa19.32■□□□□ 0.68
UPF3A-202ENST00000375299 C5orf42Q9H799 3197 aa19.31■□□□□ 0.68
UPF3A-202ENST00000375299 GLCEO94923 617 aa19.31■□□□□ 0.68
UPF3A-202ENST00000375299 CSF1P09603 554 aa19.31■□□□□ 0.68
UPF3A-202ENST00000375299 CT62P0C5K7 136 aa19.31■□□□□ 0.68
UPF3A-202ENST00000375299 ADH7P40394 386 aa19.31■□□□□ 0.68
UPF3A-202ENST00000375299 MPPED2Q15777 294 aa19.31■□□□□ 0.68
UPF3A-202ENST00000375299 TSSK4Q6SA08 328 aa19.31■□□□□ 0.68
UPF3A-202ENST00000375299 ATRAIDQ6UW56 229 aa19.31■□□□□ 0.68
UPF3A-202ENST00000375299 LRRN1Q6UXK5 716 aa19.31■□□□□ 0.68
UPF3A-202ENST00000375299 LRRTM1Q86UE6 522 aa19.31■□□□□ 0.68
UPF3A-202ENST00000375299 TMPRSS12Q86WS5 348 aa19.31■□□□□ 0.68
UPF3A-202ENST00000375299 COLEC10Q9Y6Z7 277 aa19.31■□□□□ 0.68
UPF3A-202ENST00000375299 XRCC3O43542 346 aa19.3■□□□□ 0.68
UPF3A-202ENST00000375299 RPP14O95059 124 aaKnown RBP19.3■□□□□ 0.68
UPF3A-202ENST00000375299 SPDEFO95238 335 aa19.3■□□□□ 0.68
UPF3A-202ENST00000375299 RPA2P15927 270 aa19.3■□□□□ 0.68
UPF3A-202ENST00000375299 MPGP29372 298 aa19.3■□□□□ 0.68
UPF3A-202ENST00000375299 SOX2P48431 317 aa19.3■□□□□ 0.68
UPF3A-202ENST00000375299 PLA2G7Q13093 441 aa19.3■□□□□ 0.68
UPF3A-202ENST00000375299 SPRED2Q7Z698 418 aa19.3■□□□□ 0.68
UPF3A-202ENST00000375299 OR6N1Q8NGY5 312 aa19.3■□□□□ 0.68
UPF3A-202ENST00000375299 RASD2Q96D21 266 aa19.3■□□□□ 0.68
UPF3A-202ENST00000375299 TAS2R8Q9NYW2 309 aa19.3■□□□□ 0.68
UPF3A-202ENST00000375299 HEBP2Q9Y5Z4 205 aa19.3■□□□□ 0.68
UPF3A-202ENST00000375299 EML5Q05BV3 1969 aa19.3■□□□□ 0.68
UPF3A-202ENST00000375299 URADA6NGE7 173 aa19.3■□□□□ 0.68
UPF3A-202ENST00000375299 IGF2P01344 180 aa19.3■□□□□ 0.68
UPF3A-202ENST00000375299 APOC3P02656 99 aa19.3■□□□□ 0.68
UPF3A-202ENST00000375299 MGAT2Q10469 447 aa19.3■□□□□ 0.68
UPF3A-202ENST00000375299 LINC01590Q5TEZ4 76 aa19.3■□□□□ 0.68
UPF3A-202ENST00000375299 ULK3Q6PHR2 472 aa19.3■□□□□ 0.68
UPF3A-202ENST00000375299 KIRREL2Q6UWL6 708 aa19.3■□□□□ 0.68
UPF3A-202ENST00000375299 TMEFF1Q8IYR6 380 aa19.3■□□□□ 0.68
UPF3A-202ENST00000375299 SHISA5Q8N114 240 aa19.3■□□□□ 0.68
UPF3A-202ENST00000375299 OR5AK2Q8NH90 309 aa19.3■□□□□ 0.68
UPF3A-202ENST00000375299 TNFAIP8L1Q8WVP5 186 aa19.3■□□□□ 0.68
UPF3A-202ENST00000375299 MARC2Q969Z3 335 aa19.3■□□□□ 0.68
UPF3A-202ENST00000375299 OR2A5Q96R48 311 aa19.3■□□□□ 0.68
UPF3A-202ENST00000375299 SLC38A3Q99624 504 aa19.3■□□□□ 0.68
UPF3A-202ENST00000375299 MFFQ9GZY8 342 aa19.3■□□□□ 0.68
UPF3A-202ENST00000375299 SERGEFQ9UGK8 458 aa19.3■□□□□ 0.68
UPF3A-202ENST00000375299 ARPC3O15145 178 aa19.29■□□□□ 0.68
UPF3A-202ENST00000375299 NKX2-2O95096 273 aa19.29■□□□□ 0.68
UPF3A-202ENST00000375299 EGFP01133 1207 aa19.29■□□□□ 0.68
UPF3A-202ENST00000375299 RLN2P04090 185 aa19.29■□□□□ 0.68
UPF3A-202ENST00000375299 OR8G3PP0DMU2 310 aa19.29■□□□□ 0.68
UPF3A-202ENST00000375299 ALKBH1Q13686 389 aaKnown RBP19.29■□□□□ 0.68
UPF3A-202ENST00000375299 MAMSTRQ6ZN01 415 aa19.29■□□□□ 0.68
UPF3A-202ENST00000375299 FAM220AQ7Z4H9 259 aa19.29■□□□□ 0.68
UPF3A-202ENST00000375299 TMEM52Q8NDY8 209 aa19.29■□□□□ 0.68
UPF3A-202ENST00000375299 OR4D10Q8NGI6 311 aa19.29■□□□□ 0.68
UPF3A-202ENST00000375299 SLC25A32Q9H2D1 315 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms