RNA–Protein interactions for RNA: ENST00000375274.6

PTCH1-203, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 4,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-203ENST00000375274 GABARAPH6UMI1 98 aa10.66□□□□□ -0.7
PTCH1-203ENST00000375274 M0R082 166 aa10.66□□□□□ -0.7
PTCH1-203ENST00000375274 SLC2A10O95528 541 aa10.66□□□□□ -0.7
PTCH1-203ENST00000375274 SLC35E2P0CK97 266 aa10.66□□□□□ -0.7
PTCH1-203ENST00000375274 IRS1P35568 1242 aa10.66□□□□□ -0.7
PTCH1-203ENST00000375274 MRPL19P49406 292 aaKnown RBP10.66□□□□□ -0.7
PTCH1-203ENST00000375274 MECP2P51608 486 aaKnown RBP10.66□□□□□ -0.7
PTCH1-203ENST00000375274 DYRK1AQ13627 763 aa10.66□□□□□ -0.7
PTCH1-203ENST00000375274 MEP1BQ16820 701 aa10.66□□□□□ -0.7
PTCH1-203ENST00000375274 TMEM52BQ4KMG9 183 aa10.66□□□□□ -0.7
PTCH1-203ENST00000375274 TIGD3Q6B0B8 471 aa10.66□□□□□ -0.7
PTCH1-203ENST00000375274 TRAPPC6BQ86SZ2 158 aa10.66□□□□□ -0.7
PTCH1-203ENST00000375274 SLC43A2Q8N370 569 aa10.66□□□□□ -0.7
PTCH1-203ENST00000375274 PFN4Q8NHR9 129 aa10.66□□□□□ -0.7
PTCH1-203ENST00000375274 BCL2L10Q9HD36 194 aa10.66□□□□□ -0.7
PTCH1-203ENST00000375274 SLC22A23A1A5C7 686 aa10.66□□□□□ -0.7
PTCH1-203ENST00000375274 ZNF217O75362 1048 aa10.66□□□□□ -0.7
PTCH1-203ENST00000375274 SIX6O95475 246 aa10.66□□□□□ -0.7
PTCH1-203ENST00000375274 RAB6AP20340 208 aa10.66□□□□□ -0.7
PTCH1-203ENST00000375274 ETV6P41212 452 aa10.66□□□□□ -0.7
PTCH1-203ENST00000375274 EPHA5P54756 1037 aa10.66□□□□□ -0.7
PTCH1-203ENST00000375274 DCAF7P61962 342 aa10.66□□□□□ -0.7
PTCH1-203ENST00000375274 MAT1AQ00266 395 aaKnown RBP10.66□□□□□ -0.7
PTCH1-203ENST00000375274 RIN1Q13671 783 aa10.66□□□□□ -0.7
PTCH1-203ENST00000375274 TRMT12Q53H54 448 aaKnown RBP10.66□□□□□ -0.7
PTCH1-203ENST00000375274 AADACL4Q5VUY2 407 aa10.66□□□□□ -0.7
PTCH1-203ENST00000375274 CST9Q5W186 159 aa10.66□□□□□ -0.7
PTCH1-203ENST00000375274 GIMAP5Q96F15 307 aa10.66□□□□□ -0.7
PTCH1-203ENST00000375274 SLC25A21Q9BQT8 299 aaPredicted RBP10.66□□□□□ -0.7
PTCH1-203ENST00000375274 HDAC8Q9BY41 377 aa10.66□□□□□ -0.7
PTCH1-203ENST00000375274 ZBP1Q9H171 429 aa10.66□□□□□ -0.7
PTCH1-203ENST00000375274 ZMAT3Q9HA38 289 aaKnown RBP10.66□□□□□ -0.7
PTCH1-203ENST00000375274 EHFQ9NZC4 300 aa10.66□□□□□ -0.7
PTCH1-203ENST00000375274 ZC3H12DA2A288 527 aaKnown RBP10.66□□□□□ -0.7
PTCH1-203ENST00000375274 TMEM221A6NGB7 291 aa10.66□□□□□ -0.7
PTCH1-203ENST00000375274 CHRM4P08173 479 aa10.66□□□□□ -0.7
PTCH1-203ENST00000375274 LUMP51884 338 aaPredicted RBP10.66□□□□□ -0.7
PTCH1-203ENST00000375274 DGCR2P98153 550 aa10.66□□□□□ -0.7
PTCH1-203ENST00000375274 FGL2Q14314 439 aa10.66□□□□□ -0.7
PTCH1-203ENST00000375274 KIAA0040Q15053 153 aa10.66□□□□□ -0.7
PTCH1-203ENST00000375274 MEX3BQ6ZN04 569 aaKnown RBP10.66□□□□□ -0.7
PTCH1-203ENST00000375274 KANSL1Q7Z3B3 1105 aa10.66□□□□□ -0.7
PTCH1-203ENST00000375274 LIMS2Q7Z4I7 341 aa10.66□□□□□ -0.7
PTCH1-203ENST00000375274 ZNF695Q8IW36 515 aa10.66□□□□□ -0.7
PTCH1-203ENST00000375274 FAM160A2Q8N612 972 aaPredicted RBP10.66□□□□□ -0.7
PTCH1-203ENST00000375274 FAM3DQ96BQ1 224 aa10.66□□□□□ -0.7
PTCH1-203ENST00000375274 ARHGAP9Q9BRR9 750 aa10.66□□□□□ -0.7
PTCH1-203ENST00000375274 RPH3AQ9Y2J0 694 aaPredicted RBP10.66□□□□□ -0.7
PTCH1-203ENST00000375274 SEC16AO15027 2179 aa10.66□□□□□ -0.7
PTCH1-203ENST00000375274 BLACEA4D250 179 aa10.65□□□□□ -0.7
PTCH1-203ENST00000375274 GLCEO94923 617 aa10.65□□□□□ -0.7
PTCH1-203ENST00000375274 IFNA17P01571 189 aa10.65□□□□□ -0.7
PTCH1-203ENST00000375274 OR1D4P47884 311 aa10.65□□□□□ -0.7
PTCH1-203ENST00000375274 MRPL49Q13405 166 aaKnown RBP10.65□□□□□ -0.7
PTCH1-203ENST00000375274 LIPNQ5VXI9 398 aa10.65□□□□□ -0.7
PTCH1-203ENST00000375274 HEPHL1Q6MZM0 1159 aa10.65□□□□□ -0.7
PTCH1-203ENST00000375274 SLC16A12Q6ZSM3 486 aa10.65□□□□□ -0.7
PTCH1-203ENST00000375274 CMTM1Q8IZ96 169 aa10.65□□□□□ -0.7
PTCH1-203ENST00000375274 OR52I2Q8NH67 350 aa10.65□□□□□ -0.7
PTCH1-203ENST00000375274 RASD2Q96D21 266 aa10.65□□□□□ -0.7
PTCH1-203ENST00000375274 SLC41A2Q96JW4 573 aa10.65□□□□□ -0.7
PTCH1-203ENST00000375274 CSF3RQ99062 836 aa10.65□□□□□ -0.7
PTCH1-203ENST00000375274 SELENOIQ9C0D9 397 aa10.65□□□□□ -0.7
PTCH1-203ENST00000375274 NXF5Q9H1B4 397 aaKnown RBP10.65□□□□□ -0.7
PTCH1-203ENST00000375274 OR10A5Q9H207 317 aa10.65□□□□□ -0.7
PTCH1-203ENST00000375274 ENY2Q9NPA8 101 aa10.65□□□□□ -0.7
PTCH1-203ENST00000375274 ECM29Q5VYK3 1845 aa10.65□□□□□ -0.7
PTCH1-203ENST00000375274 MAN2B1O00754 1011 aa10.65□□□□□ -0.7
PTCH1-203ENST00000375274 OPN1LWP04000 364 aa10.65□□□□□ -0.7
PTCH1-203ENST00000375274 ACY1Q03154 408 aa10.65□□□□□ -0.7
PTCH1-203ENST00000375274 CAMK2DQ13557 499 aa10.65□□□□□ -0.7
PTCH1-203ENST00000375274 OR4K15Q8NH41 348 aa10.65□□□□□ -0.7
PTCH1-203ENST00000375274 DVL3Q92997 716 aaPredicted RBP10.65□□□□□ -0.7
PTCH1-203ENST00000375274 TCEAL3Q969E4 200 aa10.65□□□□□ -0.7
PTCH1-203ENST00000375274 SLC35A4Q96G79 324 aa10.65□□□□□ -0.7
PTCH1-203ENST00000375274 RADILQ96JH8 1075 aa10.65□□□□□ -0.7
PTCH1-203ENST00000375274 SLCO5A1Q9H2Y9 848 aa10.65□□□□□ -0.7
PTCH1-203ENST00000375274 PLSCR3Q9NRY6 295 aa10.65□□□□□ -0.7
PTCH1-203ENST00000375274 NTNG1Q9Y2I2 539 aa10.65□□□□□ -0.7
PTCH1-203ENST00000375274 LCMT2O60294 686 aaKnown RBP10.65□□□□□ -0.7
PTCH1-203ENST00000375274 SELENOFO60613 162 aa10.65□□□□□ -0.7
PTCH1-203ENST00000375274 ZNF780AO75290 641 aaPredicted RBP10.65□□□□□ -0.7
PTCH1-203ENST00000375274 THBS1P07996 1170 aa10.65□□□□□ -0.7
PTCH1-203ENST00000375274 GABRR1P24046 479 aa10.65□□□□□ -0.7
PTCH1-203ENST00000375274 ITGB8P26012 769 aa10.65□□□□□ -0.7
PTCH1-203ENST00000375274 DEFB133Q30KQ1 61 aa10.65□□□□□ -0.7
PTCH1-203ENST00000375274 SLC35D3Q5M8T2 416 aa10.65□□□□□ -0.7
PTCH1-203ENST00000375274 TMPPEQ6ZT21 453 aa10.65□□□□□ -0.7
PTCH1-203ENST00000375274 SLC25A19Q9HC21 320 aa10.65□□□□□ -0.7
PTCH1-203ENST00000375274 DAPP1Q9UN19 280 aa10.65□□□□□ -0.7
PTCH1-203ENST00000375274 RP1P56715 2156 aa10.65□□□□□ -0.7
PTCH1-203ENST00000375274 A6NLC8 198 aa10.65□□□□□ -0.71
PTCH1-203ENST00000375274 YY2O15391 372 aa10.65□□□□□ -0.71
PTCH1-203ENST00000375274 BPNT1O95861 308 aa10.65□□□□□ -0.71
PTCH1-203ENST00000375274 P04436 131 aa10.65□□□□□ -0.71
PTCH1-203ENST00000375274 SNRNP70P08621 437 aaKnown RBP10.65□□□□□ -0.71
PTCH1-203ENST00000375274 GABRB1P18505 474 aa10.65□□□□□ -0.71
PTCH1-203ENST00000375274 PEA15Q15121 130 aa10.65□□□□□ -0.71
PTCH1-203ENST00000375274 GLYATL3Q5SZD4 288 aa10.65□□□□□ -0.71
PTCH1-203ENST00000375274 NIPAL3Q6P499 406 aa10.65□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms