RNA–Protein interactions for RNA: ENST00000375254.7

UBR4-204, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR4, Length 15,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-204ENST00000375254 SHMT2P34897 504 aa6.16□□□□□ -1.42
UBR4-204ENST00000375254 TRHRP34981 398 aaPredicted RBP6.16□□□□□ -1.42
UBR4-204ENST00000375254 TFAP2EQ6VUC0 442 aa6.16□□□□□ -1.42
UBR4-204ENST00000375254 MMP21Q8N119 569 aa6.16□□□□□ -1.42
UBR4-204ENST00000375254 OR5AR1Q8NGP9 310 aa6.16□□□□□ -1.42
UBR4-204ENST00000375254 CMTM2Q8TAZ6 248 aa6.16□□□□□ -1.42
UBR4-204ENST00000375254 PITX2Q99697 317 aa6.16□□□□□ -1.42
UBR4-204ENST00000375254 INPP5KQ9BT40 448 aa6.16□□□□□ -1.42
UBR4-204ENST00000375254 TMEM191AQ9H0A3 160 aa6.16□□□□□ -1.42
UBR4-204ENST00000375254 KCNK6Q9Y257 313 aa6.16□□□□□ -1.42
UBR4-204ENST00000375254 CSAG2Q9Y5P2 127 aa6.16□□□□□ -1.42
UBR4-204ENST00000375254 S1PR4O95977 384 aa6.16□□□□□ -1.42
UBR4-204ENST00000375254 IRF1P10914 325 aa6.16□□□□□ -1.42
UBR4-204ENST00000375254 ATP1B2P14415 290 aaPredicted RBP6.16□□□□□ -1.42
UBR4-204ENST00000375254 RTL8BQ17RB0 113 aa6.16□□□□□ -1.42
UBR4-204ENST00000375254 OR5AU1Q8NGC0 362 aa6.16□□□□□ -1.42
UBR4-204ENST00000375254 OR4N2Q8NGD1 307 aa6.16□□□□□ -1.42
UBR4-204ENST00000375254 CDC42EP3Q9UKI2 254 aa6.16□□□□□ -1.42
UBR4-204ENST00000375254 SMIM30A4D0T7 59 aa6.16□□□□□ -1.42
UBR4-204ENST00000375254 OR6C76A6NM76 312 aa6.16□□□□□ -1.42
UBR4-204ENST00000375254 FIGNL2A6NMB9 653 aa6.16□□□□□ -1.42
UBR4-204ENST00000375254 SUSD5O60279 629 aa6.16□□□□□ -1.42
UBR4-204ENST00000375254 ODF4Q2M2E3 257 aa6.16□□□□□ -1.42
UBR4-204ENST00000375254 AMZ1Q400G9 498 aa6.16□□□□□ -1.42
UBR4-204ENST00000375254 DNLZQ5SXM8 178 aa6.16□□□□□ -1.42
UBR4-204ENST00000375254 STARD4Q96DR4 205 aa6.16□□□□□ -1.42
UBR4-204ENST00000375254 JAM3Q9BX67 310 aa6.16□□□□□ -1.42
UBR4-204ENST00000375254 ZNF442Q9H7R0 627 aa6.16□□□□□ -1.42
UBR4-204ENST00000375254 ZNF608Q9ULD9 1512 aaPredicted RBP6.16□□□□□ -1.42
UBR4-204ENST00000375254 OTOL1A6NHN0 477 aaPredicted RBP6.16□□□□□ -1.42
UBR4-204ENST00000375254 HIDE1A8MVS5 230 aa6.16□□□□□ -1.42
UBR4-204ENST00000375254 MPC1LP0DKB6 136 aa6.16□□□□□ -1.42
UBR4-204ENST00000375254 INSRRP14616 1297 aa6.16□□□□□ -1.42
UBR4-204ENST00000375254 TIA1P31483 386 aaKnown RBP eCLIP6.16□□□□□ -1.422e-11■■■□□ 14.7
UBR4-204ENST00000375254 RABGGTBP53611 331 aa6.16□□□□□ -1.42
UBR4-204ENST00000375254 GRB2P62993 217 aaKnown RBP6.16□□□□□ -1.42
UBR4-204ENST00000375254 ZNF528Q3MIS6 628 aa6.16□□□□□ -1.42
UBR4-204ENST00000375254 SUSD6Q92537 303 aa6.16□□□□□ -1.42
UBR4-204ENST00000375254 TMEM106AQ96A25 262 aa6.16□□□□□ -1.42
UBR4-204ENST00000375254 IL19Q9UHD0 177 aa6.16□□□□□ -1.42
UBR4-204ENST00000375254 ATXN8OSP0DMR3 200 aa6.16□□□□□ -1.42
UBR4-204ENST00000375254 G6PCP35575 357 aa6.16□□□□□ -1.42
UBR4-204ENST00000375254 OR2W3Q7Z3T1 314 aa6.16□□□□□ -1.42
UBR4-204ENST00000375254 REM2Q8IYK8 340 aaPredicted RBP6.16□□□□□ -1.42
UBR4-204ENST00000375254 OR5A2Q8NGI9 324 aa6.16□□□□□ -1.42
UBR4-204ENST00000375254 OR2T10Q8NGZ9 312 aa6.16□□□□□ -1.42
UBR4-204ENST00000375254 NENFQ9UMX5 172 aa6.16□□□□□ -1.42
UBR4-204ENST00000375254 PCF11O94913 1555 aaKnown RBP6.16□□□□□ -1.42
UBR4-204ENST00000375254 CFAP65Q6ZU64 1925 aaKnown RBP6.16□□□□□ -1.42
UBR4-204ENST00000375254 H0YIV9 168 aa6.16□□□□□ -1.42
UBR4-204ENST00000375254 EIF1BO60739 113 aaKnown RBP6.16□□□□□ -1.42
UBR4-204ENST00000375254 HSBP1O75506 76 aa6.16□□□□□ -1.42
UBR4-204ENST00000375254 PRNPP04156 253 aa6.16□□□□□ -1.42
UBR4-204ENST00000375254 PRF1P14222 555 aa6.16□□□□□ -1.42
UBR4-204ENST00000375254 RPL12P30050 165 aaKnown RBP6.16□□□□□ -1.42
UBR4-204ENST00000375254 EIF1P41567 113 aaKnown RBP6.16□□□□□ -1.42
UBR4-204ENST00000375254 IGSF5Q9NSI5 407 aa6.16□□□□□ -1.42
UBR4-204ENST00000375254 FBXO10Q9UK96 956 aa6.16□□□□□ -1.42
UBR4-204ENST00000375254 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.16□□□□□ -1.42
UBR4-204ENST00000375254 NRP1O14786 923 aa6.16□□□□□ -1.42
UBR4-204ENST00000375254 HOXB5P09067 269 aa6.16□□□□□ -1.42
UBR4-204ENST00000375254 HOXC12P31275 282 aa6.16□□□□□ -1.42
UBR4-204ENST00000375254 MRPS34P82930 218 aaKnown RBP6.16□□□□□ -1.42
UBR4-204ENST00000375254 PLP2Q04941 152 aa6.16□□□□□ -1.42
UBR4-204ENST00000375254 GSG1Q2KHT4 349 aa6.16□□□□□ -1.42
UBR4-204ENST00000375254 GPR152Q8TDT2 470 aa6.16□□□□□ -1.42
UBR4-204ENST00000375254 FUBP1Q96AE4 644 aaKnown RBP6.16□□□□□ -1.42
UBR4-204ENST00000375254 TMEM38AQ9H6F2 299 aa6.16□□□□□ -1.42
UBR4-204ENST00000375254 ABCC1P33527 1531 aa6.16□□□□□ -1.42
UBR4-204ENST00000375254 SLC9B1P1A6NJY1 282 aa6.16□□□□□ -1.42
UBR4-204ENST00000375254 SULT2B1O00204 365 aa6.16□□□□□ -1.42
UBR4-204ENST00000375254 RRP8O43159 456 aaKnown RBP6.16□□□□□ -1.42
UBR4-204ENST00000375254 ZNF264O43296 627 aa6.16□□□□□ -1.42
UBR4-204ENST00000375254 LRP3O75074 770 aa6.16□□□□□ -1.42
UBR4-204ENST00000375254 CEBPBP17676 345 aa6.16□□□□□ -1.42
UBR4-204ENST00000375254 CISD2Q8N5K1 135 aaKnown RBP6.16□□□□□ -1.42
UBR4-204ENST00000375254 PQLC3Q8N755 202 aa6.16□□□□□ -1.42
UBR4-204ENST00000375254 SMIM4Q8WVI0 70 aa6.16□□□□□ -1.42
UBR4-204ENST00000375254 TMED6Q8WW62 240 aa6.16□□□□□ -1.42
UBR4-204ENST00000375254 TRMT2BQ96GJ1 504 aaKnown RBP6.16□□□□□ -1.42
UBR4-204ENST00000375254 ZNF668Q96K58 619 aaPredicted RBP6.16□□□□□ -1.42
UBR4-204ENST00000375254 SMIM7Q9BQ49 75 aa6.16□□□□□ -1.42
UBR4-204ENST00000375254 WASHC3Q9Y3C0 194 aa6.16□□□□□ -1.42
UBR4-204ENST00000375254 MEIS2O14770 477 aa6.15□□□□□ -1.42
UBR4-204ENST00000375254 XRCC3O43542 346 aa6.15□□□□□ -1.42
UBR4-204ENST00000375254 HLA-DRB3P79483 266 aa6.15□□□□□ -1.42
UBR4-204ENST00000375254 ZNF85Q03923 595 aa6.15□□□□□ -1.42
UBR4-204ENST00000375254 DMRTA1Q5VZB9 504 aa6.15□□□□□ -1.42
UBR4-204ENST00000375254 C2orf15Q8WU43 125 aaKnown RBP6.15□□□□□ -1.42
UBR4-204ENST00000375254 TFAP2BQ92481 460 aa6.15□□□□□ -1.42
UBR4-204ENST00000375254 ATOH1Q92858 354 aaPredicted RBP6.15□□□□□ -1.42
UBR4-204ENST00000375254 DTD2Q96FN9 168 aa6.15□□□□□ -1.42
UBR4-204ENST00000375254 C3orf30Q96M34 536 aa6.15□□□□□ -1.42
UBR4-204ENST00000375254 MRPS28Q9Y2Q9 187 aaKnown RBP6.15□□□□□ -1.42
UBR4-204ENST00000375254 CLASP1Q7Z460 1538 aa6.15□□□□□ -1.42
UBR4-204ENST00000375254 CST3P01034 146 aaPredicted RBP6.15□□□□□ -1.42
UBR4-204ENST00000375254 CTSHP09668 335 aa6.15□□□□□ -1.42
UBR4-204ENST00000375254 OMGP23515 440 aa6.15□□□□□ -1.42
UBR4-204ENST00000375254 OR4D1Q15615 310 aa6.15□□□□□ -1.42
UBR4-204ENST00000375254 DALRD3Q5D0E6 543 aaKnown RBP6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms