RNA–Protein interactions for RNA: ENST00000374680.3

RXRB-201, Transcript of retinoid X receptor beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RXRB, Length 2,908 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-201ENST00000374680 GDF15Q99988 308 aa15.53■□□□□ 0.08
RXRB-201ENST00000374680 CHIAQ9BZP6 476 aa15.53■□□□□ 0.08
RXRB-201ENST00000374680 KCNK15Q9H427 330 aa15.53■□□□□ 0.08
RXRB-201ENST00000374680 RCE1Q9Y256 329 aa15.53■□□□□ 0.08
RXRB-201ENST00000374680 TMA7Q9Y2S6 64 aaKnown RBP15.53■□□□□ 0.08
RXRB-201ENST00000374680 DHFRP00374 187 aa15.53■□□□□ 0.08
RXRB-201ENST00000374680 TMIGD3P0DMS9 266 aaPredicted RBP15.53■□□□□ 0.08
RXRB-201ENST00000374680 EFNA3P52797 238 aa15.53■□□□□ 0.08
RXRB-201ENST00000374680 FUT7Q11130 342 aa15.53■□□□□ 0.08
RXRB-201ENST00000374680 POU4F2Q12837 409 aa15.53■□□□□ 0.08
RXRB-201ENST00000374680 NSDHLQ15738 373 aa15.53■□□□□ 0.08
RXRB-201ENST00000374680 TMEM255AQ5JRV8 349 aa15.53■□□□□ 0.08
RXRB-201ENST00000374680 RPL22L1Q6P5R6 122 aaKnown RBP15.53■□□□□ 0.08
RXRB-201ENST00000374680 PM20D2Q8IYS1 436 aa15.53■□□□□ 0.08
RXRB-201ENST00000374680 OR6V1Q8N148 313 aa15.53■□□□□ 0.08
RXRB-201ENST00000374680 OR11H7Q8NGC8 314 aa15.53■□□□□ 0.08
RXRB-201ENST00000374680 OR10A4Q9H209 315 aa15.53■□□□□ 0.08
RXRB-201ENST00000374680 DPAGT1Q9H3H5 408 aa15.53■□□□□ 0.08
RXRB-201ENST00000374680 LIN7BQ9HAP6 207 aa15.53■□□□□ 0.08
RXRB-201ENST00000374680 UBQLN4Q9NRR5 601 aa15.53■□□□□ 0.08
RXRB-201ENST00000374680 MYEF2Q9P2K5 600 aaKnown RBP15.53■□□□□ 0.08
RXRB-201ENST00000374680 PLCL2Q9UPR0 1127 aa15.53■□□□□ 0.08
RXRB-201ENST00000374680 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.52■□□□□ 0.08
RXRB-201ENST00000374680 MEIS3P1A6NDR6 274 aa15.52■□□□□ 0.08
RXRB-201ENST00000374680 EFCAB7A8K855 629 aa15.52■□□□□ 0.08
RXRB-201ENST00000374680 RHPN2P1A8MT19 583 aa15.52■□□□□ 0.08
RXRB-201ENST00000374680 CD38P28907 300 aa15.52■□□□□ 0.08
RXRB-201ENST00000374680 SSTR2P30874 369 aa15.52■□□□□ 0.08
RXRB-201ENST00000374680 ACTA2P62736 377 aa15.52■□□□□ 0.08
RXRB-201ENST00000374680 ACTG2P63267 376 aa15.52■□□□□ 0.08
RXRB-201ENST00000374680 ZNF74Q16587 644 aa15.52■□□□□ 0.08
RXRB-201ENST00000374680 CDONQ4KMG0 1287 aa15.52■□□□□ 0.08
RXRB-201ENST00000374680 NANOGNBQ7Z5D8 188 aa15.52■□□□□ 0.08
RXRB-201ENST00000374680 ZC3HAV1LQ96H79 300 aaKnown RBP15.52■□□□□ 0.08
RXRB-201ENST00000374680 AMELYQ99218 206 aa15.52■□□□□ 0.08
RXRB-201ENST00000374680 FOXQ1Q9C009 403 aa15.52■□□□□ 0.08
RXRB-201ENST00000374680 TWSG1Q9GZX9 223 aa15.52■□□□□ 0.08
RXRB-201ENST00000374680 TRABD2BA6NFA1 517 aa15.52■□□□□ 0.07
RXRB-201ENST00000374680 ZNF264O43296 627 aa15.52■□□□□ 0.07
RXRB-201ENST00000374680 SSNA1O43805 119 aa15.52■□□□□ 0.07
RXRB-201ENST00000374680 TRAPPC2P0DI81 140 aa15.52■□□□□ 0.07
RXRB-201ENST00000374680 TRAPPC2BP0DI82 140 aa15.52■□□□□ 0.07
RXRB-201ENST00000374680 GDNFP39905 211 aa15.52■□□□□ 0.07
RXRB-201ENST00000374680 ELOCQ15369 112 aa15.52■□□□□ 0.07
RXRB-201ENST00000374680 SMAD2Q15796 467 aaKnown RBP15.52■□□□□ 0.07
RXRB-201ENST00000374680 ETFDHQ16134 617 aa15.52■□□□□ 0.07
RXRB-201ENST00000374680 LINC01590Q5TEZ4 76 aa15.52■□□□□ 0.07
RXRB-201ENST00000374680 ZSCAN1Q8NBB4 408 aa15.52■□□□□ 0.07
RXRB-201ENST00000374680 OR52I2Q8NH67 350 aa15.52■□□□□ 0.07
RXRB-201ENST00000374680 UBL7Q96S82 380 aaPredicted RBP15.52■□□□□ 0.07
RXRB-201ENST00000374680 ZNF576Q9H609 170 aa15.52■□□□□ 0.07
RXRB-201ENST00000374680 KLHL21Q9UJP4 597 aa15.52■□□□□ 0.07
RXRB-201ENST00000374680 SERPINA3P01011 423 aa15.51■□□□□ 0.07
RXRB-201ENST00000374680 CLPSP04118 112 aa15.51■□□□□ 0.07
RXRB-201ENST00000374680 HIST1H2ABP04908 130 aa15.51■□□□□ 0.07
RXRB-201ENST00000374680 PRKCAP17252 672 aa15.51■□□□□ 0.07
RXRB-201ENST00000374680 ERP29P30040 261 aaKnown RBP15.51■□□□□ 0.07
RXRB-201ENST00000374680 ADH7P40394 386 aa15.51■□□□□ 0.07
RXRB-201ENST00000374680 LAMTOR1Q6IAA8 161 aa15.51■□□□□ 0.07
RXRB-201ENST00000374680 WBP2NLQ6ICG8 309 aa15.51■□□□□ 0.07
RXRB-201ENST00000374680 CHRDL2Q6WN34 429 aa15.51■□□□□ 0.07
RXRB-201ENST00000374680 HIST3H2AQ7L7L0 130 aa15.51■□□□□ 0.07
RXRB-201ENST00000374680 C1orf216Q8TAB5 229 aa15.51■□□□□ 0.07
RXRB-201ENST00000374680 HIST1H2ACQ93077 130 aa15.51■□□□□ 0.07
RXRB-201ENST00000374680 CREB3L1Q96BA8 519 aa15.51■□□□□ 0.07
RXRB-201ENST00000374680 KCTD12Q96CX2 325 aaKnown RBP15.51■□□□□ 0.07
RXRB-201ENST00000374680 OR11A1Q9GZK7 315 aa15.51■□□□□ 0.07
RXRB-201ENST00000374680 CUTCQ9NTM9 273 aa15.51■□□□□ 0.07
RXRB-201ENST00000374680 ICAM5Q9UMF0 924 aa15.51■□□□□ 0.07
RXRB-201ENST00000374680 SDK2Q58EX2 2172 aa15.51■□□□□ 0.07
RXRB-201ENST00000374680 AKR7A3O95154 331 aa15.51■□□□□ 0.07
RXRB-201ENST00000374680 CD14P08571 375 aa15.51■□□□□ 0.07
RXRB-201ENST00000374680 FREM3P0C091 2139 aa15.51■□□□□ 0.07
RXRB-201ENST00000374680 GALP22466 123 aa15.51■□□□□ 0.07
RXRB-201ENST00000374680 SLC37A1P57057 533 aa15.51■□□□□ 0.07
RXRB-201ENST00000374680 SKP1P63208 163 aa15.51■□□□□ 0.07
RXRB-201ENST00000374680 TRAM1Q15629 374 aa15.51■□□□□ 0.07
RXRB-201ENST00000374680 POMGNT2Q8NAT1 580 aa15.51■□□□□ 0.07
RXRB-201ENST00000374680 OR8H1Q8NGG4 311 aa15.51■□□□□ 0.07
RXRB-201ENST00000374680 NUDT9Q9BW91 350 aa15.51■□□□□ 0.07
RXRB-201ENST00000374680 MMP25Q9NPA2 562 aa15.51■□□□□ 0.07
RXRB-201ENST00000374680 PRDM9Q9NQV7 894 aa15.51■□□□□ 0.07
RXRB-201ENST00000374680 ANKRD10Q9NXR5 420 aa15.51■□□□□ 0.07
RXRB-201ENST00000374680 MRM2Q9UI43 246 aaKnown RBP15.51■□□□□ 0.07
RXRB-201ENST00000374680 LAMP5Q9UJQ1 280 aa15.51■□□□□ 0.07
RXRB-201ENST00000374680 IGHV1OR15-9A0A0B4J2B8 117 aa15.5■□□□□ 0.07
RXRB-201ENST00000374680 ZNF879B4DU55 563 aa15.5■□□□□ 0.07
RXRB-201ENST00000374680 PPM1BO75688 479 aa15.5■□□□□ 0.07
RXRB-201ENST00000374680 GLCEO94923 617 aa15.5■□□□□ 0.07
RXRB-201ENST00000374680 OPN1LWP04000 364 aa15.5■□□□□ 0.07
RXRB-201ENST00000374680 UCHL1P09936 223 aa15.5■□□□□ 0.07
RXRB-201ENST00000374680 MEP1BQ16820 701 aa15.5■□□□□ 0.07
RXRB-201ENST00000374680 LRRN1Q6UXK5 716 aa15.5■□□□□ 0.07
RXRB-201ENST00000374680 TMPRSS12Q86WS5 348 aa15.5■□□□□ 0.07
RXRB-201ENST00000374680 ZNF676Q8N7Q3 588 aa15.5■□□□□ 0.07
RXRB-201ENST00000374680 SLC2A12Q8TD20 617 aa15.5■□□□□ 0.07
RXRB-201ENST00000374680 DPYSL5Q9BPU6 564 aa15.5■□□□□ 0.07
RXRB-201ENST00000374680 TCF7L1Q9HCS4 588 aa15.5■□□□□ 0.07
RXRB-201ENST00000374680 SLC23A1Q9UHI7 598 aa15.5■□□□□ 0.07
RXRB-201ENST00000374680 GMEB2Q9UKD1 530 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms