RNA–Protein interactions for RNA: ENST00000373888.8

SMPDL3B-201, Transcript of sphingomyelin phosphodiesterase acid like 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMPDL3B, Length 1,548 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3B-201ENST00000373888 ZNF239Q16600 458 aaKnown RBP13.12□□□□□ -0.31
SMPDL3B-201ENST00000373888 KRTCAP3Q53RY4 240 aa13.12□□□□□ -0.31
SMPDL3B-201ENST00000373888 HBMQ6B0K9 141 aa13.12□□□□□ -0.31
SMPDL3B-201ENST00000373888 SMARCD3Q6STE5 483 aa13.12□□□□□ -0.31
SMPDL3B-201ENST00000373888 HIST3H2AQ7L7L0 130 aa13.12□□□□□ -0.31
SMPDL3B-201ENST00000373888 UBQLNLQ8IYU4 475 aa13.12□□□□□ -0.31
SMPDL3B-201ENST00000373888 ENTHD1Q8IYW4 607 aa13.12□□□□□ -0.31
SMPDL3B-201ENST00000373888 SLC43A2Q8N370 569 aa13.12□□□□□ -0.31
SMPDL3B-201ENST00000373888 CISD2Q8N5K1 135 aaKnown RBP13.12□□□□□ -0.31
SMPDL3B-201ENST00000373888 MEIOBQ8N635 442 aa13.12□□□□□ -0.31
SMPDL3B-201ENST00000373888 ADPRHL1Q8NDY3 354 aa13.12□□□□□ -0.31
SMPDL3B-201ENST00000373888 OR51A7Q8NH64 312 aa13.12□□□□□ -0.31
SMPDL3B-201ENST00000373888 OR10D3Q8NH80 312 aa13.12□□□□□ -0.31
SMPDL3B-201ENST00000373888 RHOXF1Q8NHV9 184 aa13.12□□□□□ -0.31
SMPDL3B-201ENST00000373888 ZNF417Q8TAU3 575 aa13.12□□□□□ -0.31
SMPDL3B-201ENST00000373888 FAR1Q8WVX9 515 aa13.12□□□□□ -0.31
SMPDL3B-201ENST00000373888 HIST1H2ACQ93077 130 aa13.12□□□□□ -0.31
SMPDL3B-201ENST00000373888 ZNF587Q96SQ5 575 aaPredicted RBP13.12□□□□□ -0.31
SMPDL3B-201ENST00000373888 PLA2G12AQ9BZM1 189 aa13.12□□□□□ -0.31
SMPDL3B-201ENST00000373888 PRDM14Q9GZV8 571 aa13.12□□□□□ -0.31
SMPDL3B-201ENST00000373888 EGLN3Q9H6Z9 239 aa13.12□□□□□ -0.31
SMPDL3B-201ENST00000373888 SEC14L4Q9UDX3 406 aa13.12□□□□□ -0.31
SMPDL3B-201ENST00000373888 B3GALT5Q9Y2C3 310 aa13.12□□□□□ -0.31
SMPDL3B-201ENST00000373888 SH3D21A4FU49 640 aa13.11□□□□□ -0.31
SMPDL3B-201ENST00000373888 OR14I1A6ND48 311 aa13.11□□□□□ -0.31
SMPDL3B-201ENST00000373888 H3BN98 237 aa13.11□□□□□ -0.31
SMPDL3B-201ENST00000373888 H3BSA7 217 aa13.11□□□□□ -0.31
SMPDL3B-201ENST00000373888 PLPP3O14495 311 aa13.11□□□□□ -0.31
SMPDL3B-201ENST00000373888 AHCYL1O43865 530 aa13.11□□□□□ -0.31
SMPDL3B-201ENST00000373888 EIF1BO60739 113 aaKnown RBP13.11□□□□□ -0.31
SMPDL3B-201ENST00000373888 NDUFB2O95178 105 aa13.11□□□□□ -0.31
SMPDL3B-201ENST00000373888 IGFBP1P08833 259 aaPredicted RBP13.11□□□□□ -0.31
SMPDL3B-201ENST00000373888 P2RY4P51582 365 aa13.11□□□□□ -0.31
SMPDL3B-201ENST00000373888 TDGF1P3P51864 188 aa13.11□□□□□ -0.31
SMPDL3B-201ENST00000373888 AGFG1P52594 562 aaKnown RBP13.11□□□□□ -0.31
SMPDL3B-201ENST00000373888 CARD18P57730 90 aa13.11□□□□□ -0.31
SMPDL3B-201ENST00000373888 RAB39AQ14964 217 aa13.11□□□□□ -0.31
SMPDL3B-201ENST00000373888 PTGES3Q15185 160 aaKnown RBP13.11□□□□□ -0.31
SMPDL3B-201ENST00000373888 PAQR6Q6TCH4 344 aa13.11□□□□□ -0.31
SMPDL3B-201ENST00000373888 H1FNTQ75WM6 255 aaPredicted RBP13.11□□□□□ -0.31
SMPDL3B-201ENST00000373888 GHDCQ8N2G8 530 aa13.11□□□□□ -0.31
SMPDL3B-201ENST00000373888 OR8D4Q8NGM9 314 aa13.11□□□□□ -0.31
SMPDL3B-201ENST00000373888 TRUB1Q8WWH5 349 aaKnown RBP13.11□□□□□ -0.31
SMPDL3B-201ENST00000373888 OSTF1Q92882 214 aa13.11□□□□□ -0.31
SMPDL3B-201ENST00000373888 SARAFQ96BY9 339 aa13.11□□□□□ -0.31
SMPDL3B-201ENST00000373888 SNRNP40Q96DI7 357 aaKnown RBP13.11□□□□□ -0.31
SMPDL3B-201ENST00000373888 WDYHV1Q96HA8 205 aa13.11□□□□□ -0.31
SMPDL3B-201ENST00000373888 GPX7Q96SL4 187 aaPredicted RBP13.11□□□□□ -0.31
SMPDL3B-201ENST00000373888 SRXN1Q9BYN0 137 aa13.11□□□□□ -0.31
SMPDL3B-201ENST00000373888 CHST11Q9NPF2 352 aa13.11□□□□□ -0.31
SMPDL3B-201ENST00000373888 FANCFQ9NPI8 374 aa13.11□□□□□ -0.31
SMPDL3B-201ENST00000373888 TIGARQ9NQ88 270 aa13.11□□□□□ -0.31
SMPDL3B-201ENST00000373888 PAQR5Q9NXK6 330 aaPredicted RBP13.11□□□□□ -0.31
SMPDL3B-201ENST00000373888 RNF6Q9Y252 685 aa13.11□□□□□ -0.31
SMPDL3B-201ENST00000373888 ZNF407Q9C0G0 2248 aa13.11□□□□□ -0.31
SMPDL3B-201ENST00000373888 A0A1B0GTH9 108 aa13.1□□□□□ -0.31
SMPDL3B-201ENST00000373888 AQP7P3A6NL99 342 aa13.1□□□□□ -0.31
SMPDL3B-201ENST00000373888 BLOC1S5-TXNDC5H3BN57 136 aa13.1□□□□□ -0.31
SMPDL3B-201ENST00000373888 RGS10O43665 173 aa13.1□□□□□ -0.31
SMPDL3B-201ENST00000373888 SEC14L2O76054 403 aa13.1□□□□□ -0.31
SMPDL3B-201ENST00000373888 AKR7A3O95154 331 aa13.1□□□□□ -0.31
SMPDL3B-201ENST00000373888 FMO3P31513 532 aa13.1□□□□□ -0.31
SMPDL3B-201ENST00000373888 AQP2P41181 271 aa13.1□□□□□ -0.31
SMPDL3B-201ENST00000373888 EIF1AXP47813 144 aaKnown RBP13.1□□□□□ -0.31
SMPDL3B-201ENST00000373888 RPS3AP61247 264 aaKnown RBP13.1□□□□□ -0.31
SMPDL3B-201ENST00000373888 HSF1Q00613 529 aa13.1□□□□□ -0.31
SMPDL3B-201ENST00000373888 SRYQ05066 204 aa13.1□□□□□ -0.31
SMPDL3B-201ENST00000373888 RPL18Q07020 188 aaKnown RBP13.1□□□□□ -0.31
SMPDL3B-201ENST00000373888 PMS2P3Q13401 168 aa13.1□□□□□ -0.31
SMPDL3B-201ENST00000373888 NEDD8Q15843 81 aa13.1□□□□□ -0.31
SMPDL3B-201ENST00000373888 GXYLT1Q4G148 440 aa13.1□□□□□ -0.31
SMPDL3B-201ENST00000373888 THSD4Q6ZMP0 1018 aa13.1□□□□□ -0.31
SMPDL3B-201ENST00000373888 PRSS48Q7RTY5 328 aa13.1□□□□□ -0.31
SMPDL3B-201ENST00000373888 CLVS1Q8IUQ0 354 aaPredicted RBP13.1□□□□□ -0.31
SMPDL3B-201ENST00000373888 CCDC71Q8IV32 467 aaPredicted RBP13.1□□□□□ -0.31
SMPDL3B-201ENST00000373888 LRRC75AQ8NAA5 344 aa13.1□□□□□ -0.31
SMPDL3B-201ENST00000373888 ZNF540Q8NDQ6 660 aa13.1□□□□□ -0.31
SMPDL3B-201ENST00000373888 OR52L1Q8NGH7 329 aa13.1□□□□□ -0.31
SMPDL3B-201ENST00000373888 OR13F1Q8NGS4 319 aa13.1□□□□□ -0.31
SMPDL3B-201ENST00000373888 MOSPD2Q8NHP6 518 aa13.1□□□□□ -0.31
SMPDL3B-201ENST00000373888 TEX47Q8TBZ9 253 aa13.1□□□□□ -0.31
SMPDL3B-201ENST00000373888 MYDGFQ969H8 173 aa13.1□□□□□ -0.31
SMPDL3B-201ENST00000373888 CPNE4Q96A23 557 aaPredicted RBP13.1□□□□□ -0.31
SMPDL3B-201ENST00000373888 TMIGD2Q96BF3 282 aa13.1□□□□□ -0.31
SMPDL3B-201ENST00000373888 ZHX1-C8orf76Q96EF9 292 aa13.1□□□□□ -0.31
SMPDL3B-201ENST00000373888 SAMD8Q96LT4 415 aa13.1□□□□□ -0.31
SMPDL3B-201ENST00000373888 TAS2R5Q9NYW4 299 aa13.1□□□□□ -0.31
SMPDL3B-201ENST00000373888 TNFRSF10DQ9UBN6 386 aa13.1□□□□□ -0.31
SMPDL3B-201ENST00000373888 A0A1W2PNV4 684 aa13.09□□□□□ -0.31
SMPDL3B-201ENST00000373888 PTGES3LE9PB15 166 aa13.09□□□□□ -0.31
SMPDL3B-201ENST00000373888 CXCL13O43927 109 aa13.09□□□□□ -0.31
SMPDL3B-201ENST00000373888 WBP4O75554 376 aaKnown RBP13.09□□□□□ -0.31
SMPDL3B-201ENST00000373888 ADORA3P0DMS8 318 aa13.09□□□□□ -0.31
SMPDL3B-201ENST00000373888 DCKP27707 260 aa13.09□□□□□ -0.31
SMPDL3B-201ENST00000373888 POU1F1P28069 291 aa13.09□□□□□ -0.31
SMPDL3B-201ENST00000373888 PUDPQ08623 228 aa13.09□□□□□ -0.31
SMPDL3B-201ENST00000373888 ZP4Q12836 540 aa13.09□□□□□ -0.31
SMPDL3B-201ENST00000373888 PRR30Q53SZ7 412 aaPredicted RBP13.09□□□□□ -0.31
SMPDL3B-201ENST00000373888 ALG10Q5BKT4 473 aa13.09□□□□□ -0.31
SMPDL3B-201ENST00000373888 SLX4IPQ5VYV7 408 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms