RNA–Protein interactions for RNA: ENST00000373010.5

USP49-202, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 5 BASIC

Gene USP49, Length 2,446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-202ENST00000373010 SCO2O43819 266 aa17.01■□□□□ 0.31
USP49-202ENST00000373010 ARL6IP5O75915 188 aa17.01■□□□□ 0.31
USP49-202ENST00000373010 APEHP13798 732 aaKnown RBP17.01■□□□□ 0.31
USP49-202ENST00000373010 CXCR1P25024 350 aa17.01■□□□□ 0.31
USP49-202ENST00000373010 ABCD3P28288 659 aa17.01■□□□□ 0.31
USP49-202ENST00000373010 SLC6A8P48029 635 aa17.01■□□□□ 0.31
USP49-202ENST00000373010 SF3B4Q15427 424 aaKnown RBP eCLIP17.01■□□□□ 0.31
USP49-202ENST00000373010 TATDN3Q17R31 274 aa17.01■□□□□ 0.31
USP49-202ENST00000373010 CCDC58Q4VC31 144 aa17.01■□□□□ 0.31
USP49-202ENST00000373010 ZNF684Q5T5D7 378 aa17.01■□□□□ 0.31
USP49-202ENST00000373010 OR1N1Q8NGS0 311 aa17.01■□□□□ 0.31
USP49-202ENST00000373010 HSD17B8Q92506 261 aa17.01■□□□□ 0.31
USP49-202ENST00000373010 RFT1Q96AA3 541 aa17.01■□□□□ 0.31
USP49-202ENST00000373010 SHDQ96IW2 340 aa17.01■□□□□ 0.31
USP49-202ENST00000373010 TBL1XR1Q9BZK7 514 aa17.01■□□□□ 0.31
USP49-202ENST00000373010 TP63Q9H3D4 680 aaPredicted RBP17.01■□□□□ 0.31
USP49-202ENST00000373010 WNT16Q9UBV4 365 aa17.01■□□□□ 0.31
USP49-202ENST00000373010 COPS7AQ9UBW8 275 aa17.01■□□□□ 0.31
USP49-202ENST00000373010 IGHV3-20A0A0C4DH32 117 aa17.01■□□□□ 0.31
USP49-202ENST00000373010 EEF1E1O43324 174 aaKnown RBP17.01■□□□□ 0.31
USP49-202ENST00000373010 RPP14O95059 124 aaKnown RBP17.01■□□□□ 0.31
USP49-202ENST00000373010 HIST1H2ABP04908 130 aa17.01■□□□□ 0.31
USP49-202ENST00000373010 TRAPPC2P0DI81 140 aa17.01■□□□□ 0.31
USP49-202ENST00000373010 TRAPPC2BP0DI82 140 aa17.01■□□□□ 0.31
USP49-202ENST00000373010 OR8G3PP0DMU2 310 aa17.01■□□□□ 0.31
USP49-202ENST00000373010 RCVRNP35243 200 aa17.01■□□□□ 0.31
USP49-202ENST00000373010 ZFP69Q49AA0 526 aa17.01■□□□□ 0.31
USP49-202ENST00000373010 HIST3H2AQ7L7L0 130 aa17.01■□□□□ 0.31
USP49-202ENST00000373010 SLC29A4Q7RTT9 530 aa17.01■□□□□ 0.31
USP49-202ENST00000373010 SLC16A9Q7RTY1 509 aa17.01■□□□□ 0.31
USP49-202ENST00000373010 HIST1H2ACQ93077 130 aa17.01■□□□□ 0.31
USP49-202ENST00000373010 TRIM63Q969Q1 353 aa17.01■□□□□ 0.31
USP49-202ENST00000373010 MRPL48Q96GC5 212 aaKnown RBP17.01■□□□□ 0.31
USP49-202ENST00000373010 MESP1Q9BRJ9 268 aa17.01■□□□□ 0.31
USP49-202ENST00000373010 RANGRFQ9HD47 186 aaPredicted RBP17.01■□□□□ 0.31
USP49-202ENST00000373010 NOX4Q9NPH5 578 aa17.01■□□□□ 0.31
USP49-202ENST00000373010 SEMA5BQ9P283 1151 aa17.01■□□□□ 0.31
USP49-202ENST00000373010 ALG5Q9Y673 324 aa17.01■□□□□ 0.31
USP49-202ENST00000373010 ACOD1A6NK06 481 aa17■□□□□ 0.31
USP49-202ENST00000373010 PIN1P1O15428 100 aa17■□□□□ 0.31
USP49-202ENST00000373010 GATBO75879 557 aaKnown RBP17■□□□□ 0.31
USP49-202ENST00000373010 TXNDC12O95881 172 aa17■□□□□ 0.31
USP49-202ENST00000373010 AGFG1P52594 562 aaKnown RBP17■□□□□ 0.31
USP49-202ENST00000373010 GPLD1P80108 840 aa17■□□□□ 0.31
USP49-202ENST00000373010 HSF2Q03933 536 aa17■□□□□ 0.31
USP49-202ENST00000373010 GPR176Q14439 515 aa17■□□□□ 0.31
USP49-202ENST00000373010 HSD17B12Q53GQ0 312 aa17■□□□□ 0.31
USP49-202ENST00000373010 RNASE12Q5GAN4 147 aaKnown RBP17■□□□□ 0.31
USP49-202ENST00000373010 UNQ9370/PRO34162Q6UXP9 181 aa17■□□□□ 0.31
USP49-202ENST00000373010 ESPNLQ6ZVH7 1005 aa17■□□□□ 0.31
USP49-202ENST00000373010 PRSS42Q7Z5A4 293 aa17■□□□□ 0.31
USP49-202ENST00000373010 CEP76Q8TAP6 659 aa17■□□□□ 0.31
USP49-202ENST00000373010 RGP1Q92546 391 aaPredicted RBP17■□□□□ 0.31
USP49-202ENST00000373010 FYTTD1Q96QD9 318 aaKnown RBP17■□□□□ 0.31
USP49-202ENST00000373010 SLC25A18Q9H1K4 315 aa17■□□□□ 0.31
USP49-202ENST00000373010 BRD7Q9NPI1 651 aa17■□□□□ 0.31
USP49-202ENST00000373010 ATXN7L1Q9ULK2 861 aaPredicted RBP17■□□□□ 0.31
USP49-202ENST00000373010 ALG1L2C9J202 215 aa17■□□□□ 0.31
USP49-202ENST00000373010 C11orf98E9PRG8 122 aa17■□□□□ 0.31
USP49-202ENST00000373010 TO15178 435 aa17■□□□□ 0.31
USP49-202ENST00000373010 BGLAPP02818 100 aa17■□□□□ 0.31
USP49-202ENST00000373010 CD1AP06126 327 aa17■□□□□ 0.31
USP49-202ENST00000373010 DCNP07585 359 aaKnown RBP17■□□□□ 0.31
USP49-202ENST00000373010 CLDN20P56880 219 aa17■□□□□ 0.31
USP49-202ENST00000373010 TMPRSS9Q7Z410 1059 aa17■□□□□ 0.31
USP49-202ENST00000373010 OR6V1Q8N148 313 aa17■□□□□ 0.31
USP49-202ENST00000373010 CCDC74AQ96AQ1 378 aa17■□□□□ 0.31
USP49-202ENST00000373010 ADAD1Q96M93 576 aaKnown RBP17■□□□□ 0.31
USP49-202ENST00000373010 SLC22A11Q9NSA0 550 aa17■□□□□ 0.31
USP49-202ENST00000373010 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.99■□□□□ 0.31
USP49-202ENST00000373010 ZFPL1O95159 310 aa16.99■□□□□ 0.31
USP49-202ENST00000373010 GPANK1O95872 356 aa16.99■□□□□ 0.31
USP49-202ENST00000373010 SHBQ15464 509 aa16.99■□□□□ 0.31
USP49-202ENST00000373010 C16orf47Q6ZP98 133 aaPredicted RBP16.99■□□□□ 0.31
USP49-202ENST00000373010 TIGD4Q8IY51 512 aa16.99■□□□□ 0.31
USP49-202ENST00000373010 HLA-CQ95604 372 aa16.99■□□□□ 0.31
USP49-202ENST00000373010 SLC25A36Q96CQ1 311 aa16.99■□□□□ 0.31
USP49-202ENST00000373010 ZCCHC4Q9H5U6 513 aa16.99■□□□□ 0.31
USP49-202ENST00000373010 FKRPQ9H9S5 495 aa16.99■□□□□ 0.31
USP49-202ENST00000373010 C12orf10Q9HB07 376 aa16.99■□□□□ 0.31
USP49-202ENST00000373010 MRM2Q9UI43 246 aaKnown RBP16.99■□□□□ 0.31
USP49-202ENST00000373010 MOKQ9UQ07 419 aa16.99■□□□□ 0.31
USP49-202ENST00000373010 K7ESF4 209 aa16.99■□□□□ 0.31
USP49-202ENST00000373010 GPRIN2O60269 458 aa16.99■□□□□ 0.31
USP49-202ENST00000373010 RPS27P42677 84 aaKnown RBP16.99■□□□□ 0.31
USP49-202ENST00000373010 CD83Q01151 205 aa16.99■□□□□ 0.31
USP49-202ENST00000373010 COX15Q7KZN9 410 aa16.99■□□□□ 0.31
USP49-202ENST00000373010 ZNF441Q8N8Z8 693 aa16.99■□□□□ 0.31
USP49-202ENST00000373010 RPS4Y2Q8TD47 263 aa16.99■□□□□ 0.31
USP49-202ENST00000373010 GFI1Q99684 422 aa16.99■□□□□ 0.31
USP49-202ENST00000373010 ZNF281Q9Y2X9 895 aa16.99■□□□□ 0.31
USP49-202ENST00000373010 A0A1W2PQD3 144 aa16.98■□□□□ 0.31
USP49-202ENST00000373010 EIF4E2O60573 245 aaKnown RBP16.98■□□□□ 0.31
USP49-202ENST00000373010 GP1BBP13224 206 aa16.98■□□□□ 0.31
USP49-202ENST00000373010 HLA-DMAP28067 261 aa16.98■□□□□ 0.31
USP49-202ENST00000373010 LCN1P31025 176 aa16.98■□□□□ 0.31
USP49-202ENST00000373010 SRP9P49458 86 aaKnown RBP16.98■□□□□ 0.31
USP49-202ENST00000373010 RAB25P57735 213 aa16.98■□□□□ 0.31
USP49-202ENST00000373010 OTPQ5XKR4 325 aa16.98■□□□□ 0.31
USP49-202ENST00000373010 PYHIN1Q6K0P9 492 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms