RNA–Protein interactions for RNA: ENST00000372917.8

TRERF1-203, Transcript of transcriptional regulating factor 1, humanhuman

TSL 1 (best) BASIC

Gene TRERF1, Length 3,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-203ENST00000372917 A0A0U1RQV5 110 aa9.82□□□□□ -0.84
TRERF1-203ENST00000372917 TMEM129A0AVI4 362 aa9.82□□□□□ -0.84
TRERF1-203ENST00000372917 UPK3BL1B0FP48 263 aa9.82□□□□□ -0.84
TRERF1-203ENST00000372917 C9J4A7 227 aa9.82□□□□□ -0.84
TRERF1-203ENST00000372917 UPK3BL2E5RIL1 263 aa9.82□□□□□ -0.84
TRERF1-203ENST00000372917 HIST1H2BKO60814 126 aa9.82□□□□□ -0.84
TRERF1-203ENST00000372917 HIST1H2BJP06899 126 aa9.82□□□□□ -0.84
TRERF1-203ENST00000372917 C8GP07360 202 aa9.82□□□□□ -0.84
TRERF1-203ENST00000372917 PAX1P15863 534 aa9.82□□□□□ -0.84
TRERF1-203ENST00000372917 TYMPP19971 482 aa9.82□□□□□ -0.84
TRERF1-203ENST00000372917 TBPP20226 339 aa9.82□□□□□ -0.84
TRERF1-203ENST00000372917 HIST1H2BOP23527 126 aa9.82□□□□□ -0.84
TRERF1-203ENST00000372917 HIST1H2BBP33778 126 aa9.82□□□□□ -0.84
TRERF1-203ENST00000372917 RPL34P49207 117 aaKnown RBP9.82□□□□□ -0.84
TRERF1-203ENST00000372917 HIST1H2BDP58876 126 aa9.82□□□□□ -0.84
TRERF1-203ENST00000372917 HIST1H2BCP62807 126 aa9.82□□□□□ -0.84
TRERF1-203ENST00000372917 SELENOWP63302 87 aa9.82□□□□□ -0.84
TRERF1-203ENST00000372917 CPSF6Q16630 551 aaKnown RBP eCLIP9.82□□□□□ -0.84
TRERF1-203ENST00000372917 HIST2H2BEQ16778 126 aa9.82□□□□□ -0.84
TRERF1-203ENST00000372917 TMEM95Q3KNT9 176 aa9.82□□□□□ -0.84
TRERF1-203ENST00000372917 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.82□□□□□ -0.84
TRERF1-203ENST00000372917 ACOT7LQ6ZUV0 252 aa9.82□□□□□ -0.84
TRERF1-203ENST00000372917 KCTD9Q7L273 389 aa9.82□□□□□ -0.84
TRERF1-203ENST00000372917 CXXC5Q7LFL8 322 aaKnown RBP9.82□□□□□ -0.84
TRERF1-203ENST00000372917 OR4F15Q8NGB8 312 aa9.82□□□□□ -0.84
TRERF1-203ENST00000372917 OR4K2Q8NGD2 314 aa9.82□□□□□ -0.84
TRERF1-203ENST00000372917 OR4L1Q8NH43 312 aa9.82□□□□□ -0.84
TRERF1-203ENST00000372917 HIST1H2BHQ93079 126 aa9.82□□□□□ -0.84
TRERF1-203ENST00000372917 MR1Q95460 341 aa9.82□□□□□ -0.84
TRERF1-203ENST00000372917 PSMG2Q969U7 264 aa9.82□□□□□ -0.84
TRERF1-203ENST00000372917 TMEM159Q96B96 161 aa9.82□□□□□ -0.84
TRERF1-203ENST00000372917 HIST1H2BNQ99877 126 aa9.82□□□□□ -0.84
TRERF1-203ENST00000372917 HIST1H2BMQ99879 126 aa9.82□□□□□ -0.84
TRERF1-203ENST00000372917 MFSD1Q9H3U5 465 aa9.82□□□□□ -0.84
TRERF1-203ENST00000372917 R3HDMLQ9H3Y0 253 aa9.82□□□□□ -0.84
TRERF1-203ENST00000372917 SPHK2Q9NRA0 654 aa9.82□□□□□ -0.84
TRERF1-203ENST00000372917 ACER3Q9NUN7 267 aa9.82□□□□□ -0.84
TRERF1-203ENST00000372917 DKKL1Q9UK85 242 aa9.82□□□□□ -0.84
TRERF1-203ENST00000372917 CAMK2AQ9UQM7 478 aa9.82□□□□□ -0.84
TRERF1-203ENST00000372917 SCML2Q9UQR0 700 aa9.82□□□□□ -0.84
TRERF1-203ENST00000372917 ARL5AQ9Y689 179 aa9.82□□□□□ -0.84
TRERF1-203ENST00000372917 ELOA3CA0A087WX78 387 aaPredicted RBP9.81□□□□□ -0.84
TRERF1-203ENST00000372917 LOC102724200A0A096LPH7 203 aaPredicted RBP9.81□□□□□ -0.84
TRERF1-203ENST00000372917 IDSB3KWA1 339 aa9.81□□□□□ -0.84
TRERF1-203ENST00000372917 MASP2O00187 686 aa9.81□□□□□ -0.84
TRERF1-203ENST00000372917 NDUFS8O00217 210 aa9.81□□□□□ -0.84
TRERF1-203ENST00000372917 GGCTO75223 188 aaKnown RBP9.81□□□□□ -0.84
TRERF1-203ENST00000372917 AHSA1O95433 338 aa9.81□□□□□ -0.84
TRERF1-203ENST00000372917 OR12D1P0DN82 309 aa9.81□□□□□ -0.84
TRERF1-203ENST00000372917 GZMBP10144 247 aa9.81□□□□□ -0.84
TRERF1-203ENST00000372917 FDXRP22570 491 aa9.81□□□□□ -0.84
TRERF1-203ENST00000372917 EDNRBP24530 442 aa9.81□□□□□ -0.84
TRERF1-203ENST00000372917 HTR2CP28335 458 aa9.81□□□□□ -0.84
TRERF1-203ENST00000372917 CEACAM19Q7Z692 300 aa9.81□□□□□ -0.84
TRERF1-203ENST00000372917 UBE3DQ7Z6J8 389 aa9.81□□□□□ -0.84
TRERF1-203ENST00000372917 HS6ST3Q8IZP7 471 aa9.81□□□□□ -0.84
TRERF1-203ENST00000372917 FAM98AQ8NCA5 519 aaKnown RBP9.81□□□□□ -0.84
TRERF1-203ENST00000372917 NUDCD2Q8WVJ2 157 aa9.81□□□□□ -0.84
TRERF1-203ENST00000372917 FCAMRQ8WWV6 532 aa9.81□□□□□ -0.84
TRERF1-203ENST00000372917 MRGPRX3Q96LB0 322 aa9.81□□□□□ -0.84
TRERF1-203ENST00000372917 IPPKQ9H8X2 491 aa9.81□□□□□ -0.84
TRERF1-203ENST00000372917 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.81□□□□□ -0.84
TRERF1-203ENST00000372917 CRLS1Q9UJA2 301 aa9.81□□□□□ -0.84
TRERF1-203ENST00000372917 EXOSC1Q9Y3B2 195 aaKnown RBP9.81□□□□□ -0.84
TRERF1-203ENST00000372917 ADAM18Q9Y3Q7 739 aa9.81□□□□□ -0.84
TRERF1-203ENST00000372917 K7ERQ8 282 aa9.81□□□□□ -0.84
TRERF1-203ENST00000372917 GABRDO14764 452 aa9.81□□□□□ -0.84
TRERF1-203ENST00000372917 PQBP1O60828 265 aaKnown RBP9.81□□□□□ -0.84
TRERF1-203ENST00000372917 CLDN11O75508 207 aa9.81□□□□□ -0.84
TRERF1-203ENST00000372917 CASRP41180 1078 aa9.81□□□□□ -0.84
TRERF1-203ENST00000372917 MAPK9P45984 424 aa9.81□□□□□ -0.84
TRERF1-203ENST00000372917 EIF5AP63241 154 aaKnown RBP9.81□□□□□ -0.84
TRERF1-203ENST00000372917 HSD11B2P80365 405 aa9.81□□□□□ -0.84
TRERF1-203ENST00000372917 PTSQ03393 145 aa9.81□□□□□ -0.84
TRERF1-203ENST00000372917 EXOSC6Q5RKV6 272 aaKnown RBP9.81□□□□□ -0.84
TRERF1-203ENST00000372917 OLFML2AQ68BL7 652 aa9.81□□□□□ -0.84
TRERF1-203ENST00000372917 MMP21Q8N119 569 aa9.81□□□□□ -0.84
TRERF1-203ENST00000372917 TOP6BLQ8N6T0 577 aa9.81□□□□□ -0.84
TRERF1-203ENST00000372917 OR1L6Q8NGR2 347 aa9.81□□□□□ -0.84
TRERF1-203ENST00000372917 SLC25A51Q9H1U9 297 aa9.81□□□□□ -0.84
TRERF1-203ENST00000372917 GON4LQ3T8J9 2241 aa9.81□□□□□ -0.84
TRERF1-203ENST00000372917 SIP14410 1827 aa9.81□□□□□ -0.84
TRERF1-203ENST00000372917 UBR3Q6ZT12 1888 aa9.81□□□□□ -0.84
TRERF1-203ENST00000372917 TBC1D3BA6NDS4 549 aa9.81□□□□□ -0.84
TRERF1-203ENST00000372917 CCSO14618 274 aa9.81□□□□□ -0.84
TRERF1-203ENST00000372917 FGF16O43320 207 aa9.81□□□□□ -0.84
TRERF1-203ENST00000372917 ABLIM3O94929 683 aa9.81□□□□□ -0.84
TRERF1-203ENST00000372917 VAMP5O95183 116 aa9.81□□□□□ -0.84
TRERF1-203ENST00000372917 MMP3P08254 477 aa9.81□□□□□ -0.84
TRERF1-203ENST00000372917 LIMS3P0CW19 117 aa9.81□□□□□ -0.84
TRERF1-203ENST00000372917 LIMS4P0CW20 117 aa9.81□□□□□ -0.84
TRERF1-203ENST00000372917 CD79AP11912 226 aa9.81□□□□□ -0.84
TRERF1-203ENST00000372917 IRF2P14316 349 aa9.81□□□□□ -0.84
TRERF1-203ENST00000372917 MTNR1AP48039 350 aa9.81□□□□□ -0.84
TRERF1-203ENST00000372917 IDH3GP51553 393 aaPredicted RBP9.81□□□□□ -0.84
TRERF1-203ENST00000372917 REEP5Q00765 189 aa9.81□□□□□ -0.84
TRERF1-203ENST00000372917 MRPL49Q13405 166 aaKnown RBP9.81□□□□□ -0.84
TRERF1-203ENST00000372917 UBE2V2Q15819 145 aa9.81□□□□□ -0.84
TRERF1-203ENST00000372917 TBC1D3GQ6DHY5 549 aa9.81□□□□□ -0.84
TRERF1-203ENST00000372917 SLC16A14Q7RTX9 510 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms