RNA–Protein interactions for RNA: ENST00000372748.7

COL9A2-202, Transcript of collagen type IX alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A2, Length 2,862 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-202ENST00000372748 PCDHB16Q9NRJ7 776 aa13.55□□□□□ -0.24
COL9A2-202ENST00000372748 A0A1B0GWA3 101 aa13.55□□□□□ -0.24
COL9A2-202ENST00000372748 GXYLT2A0PJZ3 443 aa13.55□□□□□ -0.24
COL9A2-202ENST00000372748 F5H5P2 479 aa13.55□□□□□ -0.24
COL9A2-202ENST00000372748 AGR2O95994 175 aa13.55□□□□□ -0.24
COL9A2-202ENST00000372748 RPL4P36578 427 aaKnown RBP13.55□□□□□ -0.24
COL9A2-202ENST00000372748 UNQ9370/PRO34162Q6UXP9 181 aa13.55□□□□□ -0.24
COL9A2-202ENST00000372748 MAMSTRQ6ZN01 415 aa13.55□□□□□ -0.24
COL9A2-202ENST00000372748 HSD17B13Q7Z5P4 300 aaPredicted RBP13.55□□□□□ -0.24
COL9A2-202ENST00000372748 OR5M9Q8NGP3 310 aa13.55□□□□□ -0.24
COL9A2-202ENST00000372748 OR8K3Q8NH51 312 aa13.55□□□□□ -0.24
COL9A2-202ENST00000372748 HAVCR1Q96D42 359 aa13.55□□□□□ -0.24
COL9A2-202ENST00000372748 MFFQ9GZY8 342 aa13.55□□□□□ -0.24
COL9A2-202ENST00000372748 MRTO4Q9UKD2 239 aaKnown RBP13.55□□□□□ -0.24
COL9A2-202ENST00000372748 ALPK2Q86TB3 2170 aa13.54□□□□□ -0.24
COL9A2-202ENST00000372748 NDUFA2O43678 99 aa13.54□□□□□ -0.24
COL9A2-202ENST00000372748 IL5P05113 134 aa13.54□□□□□ -0.24
COL9A2-202ENST00000372748 ADRA2CP18825 462 aa13.54□□□□□ -0.24
COL9A2-202ENST00000372748 CMPK1P30085 196 aa13.54□□□□□ -0.24
COL9A2-202ENST00000372748 ZNF169Q14929 603 aaPredicted RBP13.54□□□□□ -0.24
COL9A2-202ENST00000372748 ODF4Q2M2E3 257 aa13.54□□□□□ -0.24
COL9A2-202ENST00000372748 NDUFAF6Q330K2 333 aa13.54□□□□□ -0.24
COL9A2-202ENST00000372748 VN1R4Q7Z5H5 301 aa13.54□□□□□ -0.24
COL9A2-202ENST00000372748 TMPRSS12Q86WS5 348 aa13.54□□□□□ -0.24
COL9A2-202ENST00000372748 CDH26Q8IXH8 852 aa13.54□□□□□ -0.24
COL9A2-202ENST00000372748 LINC00518Q8N0U6 118 aa13.54□□□□□ -0.24
COL9A2-202ENST00000372748 OR2AK2Q8NG84 335 aa13.54□□□□□ -0.24
COL9A2-202ENST00000372748 OR4C16Q8NGL9 310 aa13.54□□□□□ -0.24
COL9A2-202ENST00000372748 CMTM3Q96MX0 182 aa13.54□□□□□ -0.24
COL9A2-202ENST00000372748 NPAS1Q99742 590 aa13.54□□□□□ -0.24
COL9A2-202ENST00000372748 MFRPQ9BY79 579 aa13.54□□□□□ -0.24
COL9A2-202ENST00000372748 CHST6Q9GZX3 395 aa13.54□□□□□ -0.24
COL9A2-202ENST00000372748 RSPH9Q9H1X1 276 aaPredicted RBP13.54□□□□□ -0.24
COL9A2-202ENST00000372748 ZNF281Q9Y2X9 895 aa13.54□□□□□ -0.24
COL9A2-202ENST00000372748 A0A1B0GTH9 108 aa13.54□□□□□ -0.24
COL9A2-202ENST00000372748 TMEM272A0A1B0GTI8 110 aa13.54□□□□□ -0.24
COL9A2-202ENST00000372748 DNASE2O00115 360 aaPredicted RBP13.54□□□□□ -0.24
COL9A2-202ENST00000372748 MAS1P04201 325 aa13.54□□□□□ -0.24
COL9A2-202ENST00000372748 ACHEP22303 614 aa13.54□□□□□ -0.24
COL9A2-202ENST00000372748 IGFALSP35858 605 aa13.54□□□□□ -0.24
COL9A2-202ENST00000372748 CAPZA2P47755 286 aa13.54□□□□□ -0.24
COL9A2-202ENST00000372748 GUCA2AQ02747 115 aa13.54□□□□□ -0.24
COL9A2-202ENST00000372748 KCNAB1Q14722 419 aa13.54□□□□□ -0.24
COL9A2-202ENST00000372748 ALG10BQ5I7T1 473 aa13.54□□□□□ -0.24
COL9A2-202ENST00000372748 ELP2Q6IA86 826 aa13.54□□□□□ -0.24
COL9A2-202ENST00000372748 STAC2Q6ZMT1 411 aa13.54□□□□□ -0.24
COL9A2-202ENST00000372748 PAQR7Q86WK9 346 aa13.54□□□□□ -0.24
COL9A2-202ENST00000372748 OR8S1Q8NH09 359 aa13.54□□□□□ -0.24
COL9A2-202ENST00000372748 LCN9Q8WX39 176 aa13.54□□□□□ -0.24
COL9A2-202ENST00000372748 LRRC46Q96FV0 321 aa13.54□□□□□ -0.24
COL9A2-202ENST00000372748 NARS2Q96I59 477 aaKnown RBP13.54□□□□□ -0.24
COL9A2-202ENST00000372748 NKX3-1Q99801 234 aaPredicted RBP13.54□□□□□ -0.24
COL9A2-202ENST00000372748 SLC17A9Q9BYT1 436 aa13.54□□□□□ -0.24
COL9A2-202ENST00000372748 TCF7L1Q9HCS4 588 aa13.54□□□□□ -0.24
COL9A2-202ENST00000372748 FGF22Q9HCT0 170 aa13.54□□□□□ -0.24
COL9A2-202ENST00000372748 CHRNA9Q9UGM1 479 aa13.54□□□□□ -0.24
COL9A2-202ENST00000372748 F5P12259 2224 aa13.54□□□□□ -0.24
COL9A2-202ENST00000372748 C2orf16Q68DN1 1984 aa13.54□□□□□ -0.24
COL9A2-202ENST00000372748 HMSDA8MTL9 139 aa13.54□□□□□ -0.24
COL9A2-202ENST00000372748 GABRA3P34903 492 aa13.54□□□□□ -0.24
COL9A2-202ENST00000372748 TNFRSF17Q02223 184 aa13.54□□□□□ -0.24
COL9A2-202ENST00000372748 SLC36A1Q7Z2H8 476 aa13.54□□□□□ -0.24
COL9A2-202ENST00000372748 NAXDQ8IW45 347 aa13.54□□□□□ -0.24
COL9A2-202ENST00000372748 EID2Q8N6I1 236 aa13.54□□□□□ -0.24
COL9A2-202ENST00000372748 MFSD9Q8NBP5 474 aa13.54□□□□□ -0.24
COL9A2-202ENST00000372748 DVL3Q92997 716 aaPredicted RBP13.54□□□□□ -0.24
COL9A2-202ENST00000372748 TIMM29Q9BSF4 260 aa13.54□□□□□ -0.24
COL9A2-202ENST00000372748 TBC1D29Q9UFV1 150 aa13.54□□□□□ -0.24
COL9A2-202ENST00000372748 ICAM5Q9UMF0 924 aa13.54□□□□□ -0.24
COL9A2-202ENST00000372748 TBC1D3DA0A087WVF3 549 aa13.53□□□□□ -0.24
COL9A2-202ENST00000372748 TBC1D3IA0A087WXS9 549 aa13.53□□□□□ -0.24
COL9A2-202ENST00000372748 A0A0B4J2E0 115 aa13.53□□□□□ -0.24
COL9A2-202ENST00000372748 A0A1B0GX12 115 aa13.53□□□□□ -0.24
COL9A2-202ENST00000372748 OR6C68A6NDL8 312 aa13.53□□□□□ -0.24
COL9A2-202ENST00000372748 TBC1D3LB9A6J9 549 aa13.53□□□□□ -0.24
COL9A2-202ENST00000372748 H0YC42 278 aa13.53□□□□□ -0.24
COL9A2-202ENST00000372748 TPPPO94811 219 aa13.53□□□□□ -0.24
COL9A2-202ENST00000372748 HPP00738 406 aa13.53□□□□□ -0.24
COL9A2-202ENST00000372748 TBC1D3HP0C7X1 549 aa13.53□□□□□ -0.24
COL9A2-202ENST00000372748 FCARP24071 287 aa13.53□□□□□ -0.24
COL9A2-202ENST00000372748 MST1P26927 711 aa13.53□□□□□ -0.24
COL9A2-202ENST00000372748 CALCRP30988 508 aa13.53□□□□□ -0.24
COL9A2-202ENST00000372748 IL10RAQ13651 578 aa13.53□□□□□ -0.24
COL9A2-202ENST00000372748 UBXN2BQ14CS0 331 aa13.53□□□□□ -0.24
COL9A2-202ENST00000372748 RBMS2Q15434 407 aaKnown RBP13.53□□□□□ -0.24
COL9A2-202ENST00000372748 C4orf46Q504U0 113 aa13.53□□□□□ -0.24
COL9A2-202ENST00000372748 TBC1D3CQ6IPX1 549 aa13.53□□□□□ -0.24
COL9A2-202ENST00000372748 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.53□□□□□ -0.24
COL9A2-202ENST00000372748 TBC1D3Q8IZP1 549 aaPredicted RBP13.53□□□□□ -0.24
COL9A2-202ENST00000372748 POMGNT2Q8NAT1 580 aa13.53□□□□□ -0.24
COL9A2-202ENST00000372748 OR51S1Q8NGJ8 323 aa13.53□□□□□ -0.24
COL9A2-202ENST00000372748 OR14A16Q8NHC5 309 aa13.53□□□□□ -0.24
COL9A2-202ENST00000372748 CCL4L1Q8NHW4 92 aa13.53□□□□□ -0.24
COL9A2-202ENST00000372748 RASD2Q96D21 266 aa13.53□□□□□ -0.24
COL9A2-202ENST00000372748 Q96M85 177 aa13.53□□□□□ -0.24
COL9A2-202ENST00000372748 KXD1Q9BQD3 176 aa13.53□□□□□ -0.24
COL9A2-202ENST00000372748 RAB11FIP5Q9BXF6 653 aa13.53□□□□□ -0.24
COL9A2-202ENST00000372748 PRDM9Q9NQV7 894 aa13.53□□□□□ -0.24
COL9A2-202ENST00000372748 TRANK1O15050 2925 aa13.53□□□□□ -0.24
COL9A2-202ENST00000372748 SULT1B1O43704 296 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms