RNA–Protein interactions for RNA: ENST00000370818.7

GPC3-201, Transcript of glypican 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC3, Length 2,568 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-201ENST00000370818 MED18Q9BUE0 208 aa11.7□□□□□ -0.54
GPC3-201ENST00000370818 JAM3Q9BX67 310 aa11.7□□□□□ -0.54
GPC3-201ENST00000370818 SAV1Q9H4B6 383 aaPredicted RBP11.7□□□□□ -0.54
GPC3-201ENST00000370818 CDCP1Q9H5V8 836 aa11.7□□□□□ -0.54
GPC3-201ENST00000370818 SLC35A3Q9Y2D2 325 aa11.7□□□□□ -0.54
GPC3-201ENST00000370818 MRPS7Q9Y2R9 242 aaKnown RBP11.7□□□□□ -0.54
GPC3-201ENST00000370818 LRRN3E7EW58 273 aa11.69□□□□□ -0.54
GPC3-201ENST00000370818 OIP5O43482 229 aa11.69□□□□□ -0.54
GPC3-201ENST00000370818 ZNF254O75437 659 aa11.69□□□□□ -0.54
GPC3-201ENST00000370818 PPP1R3DO95685 299 aa11.69□□□□□ -0.54
GPC3-201ENST00000370818 FCER2P06734 321 aa11.69□□□□□ -0.54
GPC3-201ENST00000370818 STOMP27105 288 aa11.69□□□□□ -0.54
GPC3-201ENST00000370818 EPHA8P29322 1005 aaPredicted RBP11.69□□□□□ -0.54
GPC3-201ENST00000370818 NOS3P29474 1203 aa11.69□□□□□ -0.54
GPC3-201ENST00000370818 RORAP35398 523 aa11.69□□□□□ -0.54
GPC3-201ENST00000370818 DHPSP49366 369 aaPredicted RBP11.69□□□□□ -0.54
GPC3-201ENST00000370818 ELAVL1Q15717 326 aaKnown RBP11.69□□□□□ -0.54
GPC3-201ENST00000370818 ZNF791Q3KP31 576 aaPredicted RBP11.69□□□□□ -0.54
GPC3-201ENST00000370818 PLK5Q496M5 336 aa11.69□□□□□ -0.54
GPC3-201ENST00000370818 ZNF57Q68EA5 555 aaPredicted RBP11.69□□□□□ -0.54
GPC3-201ENST00000370818 ZNF574Q6ZN55 896 aaPredicted RBP11.69□□□□□ -0.54
GPC3-201ENST00000370818 MEPCEQ7L2J0 689 aaKnown RBP11.69□□□□□ -0.54
GPC3-201ENST00000370818 ZFP41Q8N8Y5 198 aa11.69□□□□□ -0.54
GPC3-201ENST00000370818 SYT14Q8NB59 555 aa11.69□□□□□ -0.54
GPC3-201ENST00000370818 HGDQ93099 445 aa11.69□□□□□ -0.54
GPC3-201ENST00000370818 C3orf49Q96BT1 292 aa11.69□□□□□ -0.54
GPC3-201ENST00000370818 SCMH1Q96GD3 660 aa11.69□□□□□ -0.54
GPC3-201ENST00000370818 KCTD7Q96MP8 289 aa11.69□□□□□ -0.54
GPC3-201ENST00000370818 TIMP4Q99727 224 aa11.69□□□□□ -0.54
GPC3-201ENST00000370818 LRRN3Q9H3W5 708 aa11.69□□□□□ -0.54
GPC3-201ENST00000370818 FANCFQ9NPI8 374 aa11.69□□□□□ -0.54
GPC3-201ENST00000370818 UBQLN4Q9NRR5 601 aa11.69□□□□□ -0.54
GPC3-201ENST00000370818 RPS6KB2Q9UBS0 482 aa11.69□□□□□ -0.54
GPC3-201ENST00000370818 KIF25Q9UIL4 384 aa11.69□□□□□ -0.54
GPC3-201ENST00000370818 SERTAD3Q9UJW9 196 aa11.69□□□□□ -0.54
GPC3-201ENST00000370818 ADAM30Q9UKF2 790 aa11.69□□□□□ -0.54
GPC3-201ENST00000370818 CACNA1EQ15878 2313 aa11.69□□□□□ -0.54
GPC3-201ENST00000370818 A0A1B0GX78 115 aa11.69□□□□□ -0.54
GPC3-201ENST00000370818 FAM86C2PA6NEL3 165 aa11.69□□□□□ -0.54
GPC3-201ENST00000370818 FRG2CA6NGY1 282 aa11.69□□□□□ -0.54
GPC3-201ENST00000370818 TUBAL3A6NHL2 446 aa11.69□□□□□ -0.54
GPC3-201ENST00000370818 ATP6V1E1P36543 226 aa11.69□□□□□ -0.54
GPC3-201ENST00000370818 ADH7P40394 386 aa11.69□□□□□ -0.54
GPC3-201ENST00000370818 INPP1P49441 399 aa11.69□□□□□ -0.54
GPC3-201ENST00000370818 NSDHLQ15738 373 aa11.69□□□□□ -0.54
GPC3-201ENST00000370818 CBLN3Q6UW01 205 aa11.69□□□□□ -0.54
GPC3-201ENST00000370818 MAMSTRQ6ZN01 415 aa11.69□□□□□ -0.54
GPC3-201ENST00000370818 OVCH2Q7RTZ1 564 aa11.69□□□□□ -0.54
GPC3-201ENST00000370818 PRSS58Q8IYP2 241 aa11.69□□□□□ -0.54
GPC3-201ENST00000370818 ATOH1Q92858 354 aaPredicted RBP11.69□□□□□ -0.54
GPC3-201ENST00000370818 LCORQ96JN0 433 aaPredicted RBP11.69□□□□□ -0.54
GPC3-201ENST00000370818 DPYSL5Q9BPU6 564 aa11.69□□□□□ -0.54
GPC3-201ENST00000370818 NUDT9Q9BW91 350 aa11.69□□□□□ -0.54
GPC3-201ENST00000370818 FBXL4Q9UKA2 621 aa11.69□□□□□ -0.54
GPC3-201ENST00000370818 ATXN7L1Q9ULK2 861 aaPredicted RBP11.69□□□□□ -0.54
GPC3-201ENST00000370818 LY6G6EA0A0G2JKS1 128 aa11.68□□□□□ -0.54
GPC3-201ENST00000370818 CLUP10909 449 aa11.68□□□□□ -0.54
GPC3-201ENST00000370818 PEPDP12955 493 aa11.68□□□□□ -0.54
GPC3-201ENST00000370818 PTBP1P26599 531 aaKnown RBP eCLIP11.68□□□□□ -0.543e-7■■■□□ 15.8
GPC3-201ENST00000370818 GPR143P51810 404 aa11.68□□□□□ -0.54
GPC3-201ENST00000370818 SKP2Q13309 424 aa11.68□□□□□ -0.54
GPC3-201ENST00000370818 CRMP1Q14194 572 aa11.68□□□□□ -0.54
GPC3-201ENST00000370818 ZNF169Q14929 603 aaPredicted RBP11.68□□□□□ -0.54
GPC3-201ENST00000370818 ARHGAP40Q5TG30 622 aa11.68□□□□□ -0.54
GPC3-201ENST00000370818 LUZP2Q86TE4 346 aa11.68□□□□□ -0.54
GPC3-201ENST00000370818 C9orf40Q8IXQ3 194 aa11.68□□□□□ -0.54
GPC3-201ENST00000370818 STPG2Q8N412 459 aa11.68□□□□□ -0.54
GPC3-201ENST00000370818 OR4C6Q8NH72 309 aa11.68□□□□□ -0.54
GPC3-201ENST00000370818 ZNF524Q96C55 264 aa11.68□□□□□ -0.54
GPC3-201ENST00000370818 NXPE2Q96DL1 559 aa11.68□□□□□ -0.54
GPC3-201ENST00000370818 RADILQ96JH8 1075 aa11.68□□□□□ -0.54
GPC3-201ENST00000370818 NPAS1Q99742 590 aa11.68□□□□□ -0.54
GPC3-201ENST00000370818 VN1R1Q9GZP7 353 aa11.68□□□□□ -0.54
GPC3-201ENST00000370818 FSCN3Q9NQT6 498 aa11.68□□□□□ -0.54
GPC3-201ENST00000370818 ICAM5Q9UMF0 924 aa11.68□□□□□ -0.54
GPC3-201ENST00000370818 U3KQA8 63 aa11.68□□□□□ -0.54
GPC3-201ENST00000370818 DMDP11532 3685 aa11.68□□□□□ -0.54
GPC3-201ENST00000370818 IGKV1D-42A0A075B6H8 117 aa11.68□□□□□ -0.54
GPC3-201ENST00000370818 CCDC163A0A0D9SF12 145 aa11.68□□□□□ -0.54
GPC3-201ENST00000370818 KRBOX1C9JBD0 128 aa11.68□□□□□ -0.54
GPC3-201ENST00000370818 PRR23D1E9PI22 279 aaPredicted RBP11.68□□□□□ -0.54
GPC3-201ENST00000370818 UTS2O95399 124 aa11.68□□□□□ -0.54
GPC3-201ENST00000370818 DHFRP00374 187 aa11.68□□□□□ -0.54
GPC3-201ENST00000370818 PAHP00439 452 aa11.68□□□□□ -0.54
GPC3-201ENST00000370818 PDGFBP01127 241 aaPredicted RBP11.68□□□□□ -0.54
GPC3-201ENST00000370818 PRR23D2P0DMB1 279 aaPredicted RBP11.68□□□□□ -0.54
GPC3-201ENST00000370818 SLC2A5P22732 501 aa11.68□□□□□ -0.54
GPC3-201ENST00000370818 HOXA6P31267 233 aa11.68□□□□□ -0.54
GPC3-201ENST00000370818 GABRA5P31644 462 aa11.68□□□□□ -0.54
GPC3-201ENST00000370818 FOXL2P58012 376 aa11.68□□□□□ -0.54
GPC3-201ENST00000370818 S100A12P80511 92 aa11.68□□□□□ -0.54
GPC3-201ENST00000370818 ACSM1Q08AH1 577 aa11.68□□□□□ -0.54
GPC3-201ENST00000370818 EBPQ15125 230 aaKnown RBP11.68□□□□□ -0.54
GPC3-201ENST00000370818 PMS2CLQ68D20 193 aa11.68□□□□□ -0.54
GPC3-201ENST00000370818 ZNF322Q6U7Q0 402 aaPredicted RBP11.68□□□□□ -0.54
GPC3-201ENST00000370818 KLHL36Q8N4N3 616 aa11.68□□□□□ -0.54
GPC3-201ENST00000370818 BMPERQ8N8U9 685 aa11.68□□□□□ -0.54
GPC3-201ENST00000370818 CYB561A3Q8NBI2 242 aa11.68□□□□□ -0.54
GPC3-201ENST00000370818 OR2T4Q8NH00 348 aa11.68□□□□□ -0.54
GPC3-201ENST00000370818 OR52N1Q8NH53 320 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms