RNA–Protein interactions for RNA: ENST00000369462.5

BRCC3-204, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,846 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-204ENST00000369462 PLXDC2Q6UX71 529 aa9.79□□□□□ -0.84
BRCC3-204ENST00000369462 CASP12Q6UXS9 341 aa9.79□□□□□ -0.84
BRCC3-204ENST00000369462 DPY19L2P2Q6ZN68 376 aa9.79□□□□□ -0.84
BRCC3-204ENST00000369462 USP51Q70EK9 711 aa9.79□□□□□ -0.84
BRCC3-204ENST00000369462 CHMP1BQ7LBR1 199 aa9.79□□□□□ -0.84
BRCC3-204ENST00000369462 GHDCQ8N2G8 530 aa9.79□□□□□ -0.84
BRCC3-204ENST00000369462 LRRC75AQ8NAA5 344 aa9.79□□□□□ -0.84
BRCC3-204ENST00000369462 ROBO4Q8WZ75 1007 aa9.79□□□□□ -0.84
BRCC3-204ENST00000369462 CPNE4Q96A23 557 aaPredicted RBP9.79□□□□□ -0.84
BRCC3-204ENST00000369462 NAA11Q9BSU3 229 aaPredicted RBP9.79□□□□□ -0.84
BRCC3-204ENST00000369462 ANKRD60Q9BZ19 345 aa9.79□□□□□ -0.84
BRCC3-204ENST00000369462 NRIP3Q9NQ35 241 aa9.79□□□□□ -0.84
BRCC3-204ENST00000369462 INIPQ9NRY2 104 aa9.79□□□□□ -0.84
BRCC3-204ENST00000369462 ASF1BQ9NVP2 202 aa9.79□□□□□ -0.84
BRCC3-204ENST00000369462 IMPAD1Q9NX62 359 aa9.79□□□□□ -0.84
BRCC3-204ENST00000369462 KLHL13Q9P2N7 655 aa9.79□□□□□ -0.84
BRCC3-204ENST00000369462 IER3IP1Q9Y5U9 82 aa9.79□□□□□ -0.84
BRCC3-204ENST00000369462 GTF3C1Q12789 2109 aa9.79□□□□□ -0.84
BRCC3-204ENST00000369462 NBASA2RRP1 2371 aa9.79□□□□□ -0.84
BRCC3-204ENST00000369462 IGSF10Q6WRI0 2623 aa9.79□□□□□ -0.84
BRCC3-204ENST00000369462 SMAD9O15198 467 aaKnown RBP9.78□□□□□ -0.84
BRCC3-204ENST00000369462 MLLT10P55197 1068 aa9.78□□□□□ -0.84
BRCC3-204ENST00000369462 TOP3AQ13472 1001 aaPredicted RBP9.78□□□□□ -0.84
BRCC3-204ENST00000369462 PON3Q15166 354 aa9.78□□□□□ -0.84
BRCC3-204ENST00000369462 KRTCAP3Q53RY4 240 aa9.78□□□□□ -0.84
BRCC3-204ENST00000369462 ZNF691Q5VV52 312 aa9.78□□□□□ -0.84
BRCC3-204ENST00000369462 C8orf59Q8N0T1 100 aaPredicted RBP9.78□□□□□ -0.84
BRCC3-204ENST00000369462 LNX2Q8N448 690 aa9.78□□□□□ -0.84
BRCC3-204ENST00000369462 OR5M9Q8NGP3 310 aa9.78□□□□□ -0.84
BRCC3-204ENST00000369462 APOL4Q9BPW4 351 aa9.78□□□□□ -0.84
BRCC3-204ENST00000369462 TEX12Q9BXU0 123 aa9.78□□□□□ -0.84
BRCC3-204ENST00000369462 POLDIP3Q9BY77 421 aaKnown RBP9.78□□□□□ -0.84
BRCC3-204ENST00000369462 SLC25A19Q9HC21 320 aa9.78□□□□□ -0.84
BRCC3-204ENST00000369462 RASSF1Q9NS23 344 aa9.78□□□□□ -0.84
BRCC3-204ENST00000369462 B3GAT1Q9P2W7 334 aa9.78□□□□□ -0.84
BRCC3-204ENST00000369462 DENRO43583 198 aaKnown RBP9.78□□□□□ -0.84
BRCC3-204ENST00000369462 IL5RAQ01344 420 aa9.78□□□□□ -0.84
BRCC3-204ENST00000369462 POU3F1Q03052 451 aaPredicted RBP9.78□□□□□ -0.84
BRCC3-204ENST00000369462 ZP4Q12836 540 aa9.78□□□□□ -0.84
BRCC3-204ENST00000369462 MED21Q13503 144 aa9.78□□□□□ -0.84
BRCC3-204ENST00000369462 SNAPC1Q16533 368 aa9.78□□□□□ -0.84
BRCC3-204ENST00000369462 ZNF239Q16600 458 aaKnown RBP9.78□□□□□ -0.84
BRCC3-204ENST00000369462 C12orf73Q69YU5 71 aa9.78□□□□□ -0.84
BRCC3-204ENST00000369462 PXKQ7Z7A4 578 aa9.78□□□□□ -0.84
BRCC3-204ENST00000369462 CHERPQ8IWX8 916 aaKnown RBP9.78□□□□□ -0.84
BRCC3-204ENST00000369462 SLC43A2Q8N370 569 aa9.78□□□□□ -0.84
BRCC3-204ENST00000369462 ADPRHL1Q8NDY3 354 aa9.78□□□□□ -0.84
BRCC3-204ENST00000369462 FNDC9Q8TBE3 224 aa9.78□□□□□ -0.84
BRCC3-204ENST00000369462 Q96M85 177 aa9.78□□□□□ -0.84
BRCC3-204ENST00000369462 IL4I1Q96RQ9 567 aa9.78□□□□□ -0.84
BRCC3-204ENST00000369462 GPX7Q96SL4 187 aaPredicted RBP9.78□□□□□ -0.84
BRCC3-204ENST00000369462 NDEL1Q9GZM8 345 aa9.78□□□□□ -0.84
BRCC3-204ENST00000369462 PAQR5Q9NXK6 330 aaPredicted RBP9.78□□□□□ -0.84
BRCC3-204ENST00000369462 AASSQ9UDR5 926 aa9.78□□□□□ -0.84
BRCC3-204ENST00000369462 COL6A6A6NMZ7 2263 aa9.78□□□□□ -0.84
BRCC3-204ENST00000369462 A0A1W2PRG6 482 aa9.78□□□□□ -0.84
BRCC3-204ENST00000369462 SLC2A10O95528 541 aa9.78□□□□□ -0.84
BRCC3-204ENST00000369462 ACADSP16219 412 aa9.78□□□□□ -0.84
BRCC3-204ENST00000369462 RPS6KA3P51812 740 aa9.78□□□□□ -0.84
BRCC3-204ENST00000369462 ACKR1Q16570 336 aa9.78□□□□□ -0.84
BRCC3-204ENST00000369462 TCEANCQ8N8B7 351 aa9.78□□□□□ -0.84
BRCC3-204ENST00000369462 ANKK1Q8NFD2 765 aa9.78□□□□□ -0.84
BRCC3-204ENST00000369462 SLC38A2Q96QD8 506 aa9.78□□□□□ -0.84
BRCC3-204ENST00000369462 TUBA1CQ9BQE3 449 aa9.78□□□□□ -0.84
BRCC3-204ENST00000369462 PRDM14Q9GZV8 571 aa9.78□□□□□ -0.84
BRCC3-204ENST00000369462 GRHPRQ9UBQ7 328 aa9.78□□□□□ -0.84
BRCC3-204ENST00000369462 MCTS1Q9ULC4 181 aaKnown RBP9.78□□□□□ -0.84
BRCC3-204ENST00000369462 GPR52Q9Y2T5 361 aa9.78□□□□□ -0.84
BRCC3-204ENST00000369462 PCDHGB5Q9Y5G0 923 aa9.78□□□□□ -0.84
BRCC3-204ENST00000369462 OR14I1A6ND48 311 aa9.77□□□□□ -0.85
BRCC3-204ENST00000369462 ARPC3O15145 178 aa9.77□□□□□ -0.85
BRCC3-204ENST00000369462 SYNGR4O95473 234 aa9.77□□□□□ -0.85
BRCC3-204ENST00000369462 HMGN1P05114 100 aa9.77□□□□□ -0.85
BRCC3-204ENST00000369462 IFNGR1P15260 489 aa9.77□□□□□ -0.85
BRCC3-204ENST00000369462 ZNF43P17038 809 aa9.77□□□□□ -0.85
BRCC3-204ENST00000369462 MYF6P23409 242 aa9.77□□□□□ -0.85
BRCC3-204ENST00000369462 PTGS2P35354 604 aa9.77□□□□□ -0.85
BRCC3-204ENST00000369462 ISL1P61371 349 aa9.77□□□□□ -0.85
BRCC3-204ENST00000369462 IL18R1Q13478 541 aa9.77□□□□□ -0.85
BRCC3-204ENST00000369462 C1DQ13901 141 aaKnown RBP9.77□□□□□ -0.85
BRCC3-204ENST00000369462 KRT80Q6KB66 452 aa9.77□□□□□ -0.85
BRCC3-204ENST00000369462 PTCHD4Q6ZW05 846 aa9.77□□□□□ -0.85
BRCC3-204ENST00000369462 FCRLAQ7L513 359 aa9.77□□□□□ -0.85
BRCC3-204ENST00000369462 FAM122BQ7Z309 247 aa9.77□□□□□ -0.85
BRCC3-204ENST00000369462 FGD2Q7Z6J4 655 aa9.77□□□□□ -0.85
BRCC3-204ENST00000369462 THAP5Q7Z6K1 395 aa9.77□□□□□ -0.85
BRCC3-204ENST00000369462 UEVLDQ8IX04 471 aa9.77□□□□□ -0.85
BRCC3-204ENST00000369462 PM20D2Q8IYS1 436 aa9.77□□□□□ -0.85
BRCC3-204ENST00000369462 SETD9Q8NE22 299 aa9.77□□□□□ -0.85
BRCC3-204ENST00000369462 RASD2Q96D21 266 aa9.77□□□□□ -0.85
BRCC3-204ENST00000369462 PLEKHA8Q96JA3 519 aa9.77□□□□□ -0.85
BRCC3-204ENST00000369462 OXGR1Q96P68 337 aa9.77□□□□□ -0.85
BRCC3-204ENST00000369462 SLX1AQ9BQ83 275 aa9.77□□□□□ -0.85
BRCC3-204ENST00000369462 PRRG4Q9BZD6 226 aa9.77□□□□□ -0.85
BRCC3-204ENST00000369462 MED29Q9NX70 200 aa9.77□□□□□ -0.85
BRCC3-204ENST00000369462 BAIAP2Q9UQB8 552 aa9.77□□□□□ -0.85
BRCC3-204ENST00000369462 RASD1Q9Y272 281 aa9.77□□□□□ -0.85
BRCC3-204ENST00000369462 TEX13CA0A0J9YWL9 993 aa9.77□□□□□ -0.85
BRCC3-204ENST00000369462 A0A1W2PNV4 684 aa9.77□□□□□ -0.85
BRCC3-204ENST00000369462 TLX2O43763 284 aaPredicted RBP9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms