RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 TAAR8Q969N4 342 aa13.89□□□□□ -0.19
CKS1B-202ENST00000368436 DOK1Q99704 481 aa13.89□□□□□ -0.19
CKS1B-202ENST00000368436 GPR35Q9HC97 309 aa13.89□□□□□ -0.19
CKS1B-202ENST00000368436 KCNS2Q9ULS6 477 aa13.89□□□□□ -0.19
CKS1B-202ENST00000368436 IGKV1D-42A0A075B6H8 117 aa13.88□□□□□ -0.19
CKS1B-202ENST00000368436 LOC100289279A0A1B0GTE1 492 aa13.88□□□□□ -0.19
CKS1B-202ENST00000368436 A0A1B0GWA3 101 aa13.88□□□□□ -0.19
CKS1B-202ENST00000368436 ZNF503-AS2A6NEH8 195 aa13.88□□□□□ -0.19
CKS1B-202ENST00000368436 M0R082 166 aa13.88□□□□□ -0.19
CKS1B-202ENST00000368436 AIM2O14862 343 aa13.88□□□□□ -0.19
CKS1B-202ENST00000368436 CELA3BP08861 270 aa13.88□□□□□ -0.19
CKS1B-202ENST00000368436 APEHP13798 732 aaKnown RBP13.88□□□□□ -0.19
CKS1B-202ENST00000368436 ZNF23P17027 643 aa13.88□□□□□ -0.19
CKS1B-202ENST00000368436 HTR2AP28223 471 aa13.88□□□□□ -0.19
CKS1B-202ENST00000368436 THBS4P35443 961 aa13.88□□□□□ -0.19
CKS1B-202ENST00000368436 ARR3P36575 388 aa13.88□□□□□ -0.19
CKS1B-202ENST00000368436 C1DQ13901 141 aaKnown RBP13.88□□□□□ -0.19
CKS1B-202ENST00000368436 KRTAP24-1Q3LI83 254 aa13.88□□□□□ -0.19
CKS1B-202ENST00000368436 FAM120AOSQ5T036 256 aa13.88□□□□□ -0.19
CKS1B-202ENST00000368436 LRIF1Q5T3J3 769 aa13.88□□□□□ -0.19
CKS1B-202ENST00000368436 EPGNQ6UW88 154 aa13.88□□□□□ -0.19
CKS1B-202ENST00000368436 H1FNTQ75WM6 255 aaPredicted RBP13.88□□□□□ -0.19
CKS1B-202ENST00000368436 NET1Q7Z628 596 aaPredicted RBP13.88□□□□□ -0.19
CKS1B-202ENST00000368436 COMTD1Q86VU5 262 aa13.88□□□□□ -0.19
CKS1B-202ENST00000368436 TMEM123Q8N131 208 aa13.88□□□□□ -0.19
CKS1B-202ENST00000368436 GPR137CQ8N3F9 429 aa13.88□□□□□ -0.19
CKS1B-202ENST00000368436 ADPRHL1Q8NDY3 354 aa13.88□□□□□ -0.19
CKS1B-202ENST00000368436 ZNF417Q8TAU3 575 aa13.88□□□□□ -0.19
CKS1B-202ENST00000368436 SLC38A4Q969I6 547 aa13.88□□□□□ -0.19
CKS1B-202ENST00000368436 TLCD1Q96CP7 247 aa13.88□□□□□ -0.19
CKS1B-202ENST00000368436 ZNF837Q96EG3 531 aaPredicted RBP13.88□□□□□ -0.19
CKS1B-202ENST00000368436 OR2M2Q96R28 347 aa13.88□□□□□ -0.19
CKS1B-202ENST00000368436 ZNF587Q96SQ5 575 aaPredicted RBP13.88□□□□□ -0.19
CKS1B-202ENST00000368436 RAB1BQ9H0U4 201 aa13.88□□□□□ -0.19
CKS1B-202ENST00000368436 NKIRAS1Q9NYS0 192 aa13.88□□□□□ -0.19
CKS1B-202ENST00000368436 SLC25A37Q9NYZ2 338 aa13.88□□□□□ -0.19
CKS1B-202ENST00000368436 RPS6KB2Q9UBS0 482 aa13.88□□□□□ -0.19
CKS1B-202ENST00000368436 GMEB1Q9Y692 573 aa13.88□□□□□ -0.19
CKS1B-202ENST00000368436 SVEP1Q4LDE5 3571 aa13.87□□□□□ -0.19
CKS1B-202ENST00000368436 TRAV36DV7A0A075B6V5 113 aa13.87□□□□□ -0.19
CKS1B-202ENST00000368436 TMEM129A0AVI4 362 aa13.87□□□□□ -0.19
CKS1B-202ENST00000368436 VSTM5A8MXK1 200 aa13.87□□□□□ -0.19
CKS1B-202ENST00000368436 C5orf58C9J3I9 102 aa13.87□□□□□ -0.19
CKS1B-202ENST00000368436 MS4A18H0YCH9 400 aa13.87□□□□□ -0.19
CKS1B-202ENST00000368436 TRAF3IP2O43734 574 aaPredicted RBP13.87□□□□□ -0.19
CKS1B-202ENST00000368436 STAMBPO95630 424 aa13.87□□□□□ -0.19
CKS1B-202ENST00000368436 ARAFP10398 606 aa13.87□□□□□ -0.19
CKS1B-202ENST00000368436 SRD5A1P18405 259 aa13.87□□□□□ -0.19
CKS1B-202ENST00000368436 NPR2P20594 1047 aa13.87□□□□□ -0.19
CKS1B-202ENST00000368436 GIFP27352 417 aa13.87□□□□□ -0.19
CKS1B-202ENST00000368436 GRPRP30550 384 aa13.87□□□□□ -0.19
CKS1B-202ENST00000368436 MAGOHP61326 146 aaKnown RBP13.87□□□□□ -0.19
CKS1B-202ENST00000368436 CARTPTQ16568 116 aa13.87□□□□□ -0.19
CKS1B-202ENST00000368436 CEACAM16Q2WEN9 425 aa13.87□□□□□ -0.19
CKS1B-202ENST00000368436 MS4A18Q3C1V0 323 aa13.87□□□□□ -0.19
CKS1B-202ENST00000368436 DHRS4L2Q6PKH6 230 aa13.87□□□□□ -0.19
CKS1B-202ENST00000368436 FUNDC1Q8IVP5 155 aa13.87□□□□□ -0.19
CKS1B-202ENST00000368436 MSRB3Q8IXL7 192 aa13.87□□□□□ -0.19
CKS1B-202ENST00000368436 CCDC36Q8IYA8 594 aa13.87□□□□□ -0.19
CKS1B-202ENST00000368436 C10orf111Q8N326 155 aa13.87□□□□□ -0.19
CKS1B-202ENST00000368436 GOLGA6L1Q8N7Z2 621 aa13.87□□□□□ -0.19
CKS1B-202ENST00000368436 PIK3C3Q8NEB9 887 aa13.87□□□□□ -0.19
CKS1B-202ENST00000368436 IL17RDQ8NFM7 739 aa13.87□□□□□ -0.19
CKS1B-202ENST00000368436 OR6S1Q8NH40 331 aa13.87□□□□□ -0.19
CKS1B-202ENST00000368436 DNAJA4Q8WW22 397 aaPredicted RBP13.87□□□□□ -0.19
CKS1B-202ENST00000368436 NEU4Q8WWR8 484 aaPredicted RBP13.87□□□□□ -0.19
CKS1B-202ENST00000368436 SLC41A3Q96GZ6 507 aa13.87□□□□□ -0.19
CKS1B-202ENST00000368436 BPESC1Q9GZL8 116 aa13.87□□□□□ -0.19
CKS1B-202ENST00000368436 CHODLQ9H9P2 273 aa13.87□□□□□ -0.19
CKS1B-202ENST00000368436 CRLF2Q9HC73 371 aa13.87□□□□□ -0.19
CKS1B-202ENST00000368436 KLHL14Q9P2G3 628 aa13.87□□□□□ -0.19
CKS1B-202ENST00000368436 USH1CQ9Y6N9 552 aa13.87□□□□□ -0.19
CKS1B-202ENST00000368436 IGHV2OR16-5A0A0B4J2B6 119 aa13.86□□□□□ -0.19
CKS1B-202ENST00000368436 ZNF99A8MXY4 864 aaPredicted RBP13.86□□□□□ -0.19
CKS1B-202ENST00000368436 hCG_2039718K7EN88 272 aa13.86□□□□□ -0.19
CKS1B-202ENST00000368436 AKAP8O43823 692 aaKnown RBP13.86□□□□□ -0.19
CKS1B-202ENST00000368436 ZNF500O60304 480 aaPredicted RBP13.86□□□□□ -0.19
CKS1B-202ENST00000368436 TPST1O60507 370 aa13.86□□□□□ -0.19
CKS1B-202ENST00000368436 IGFBP1P08833 259 aaPredicted RBP13.86□□□□□ -0.19
CKS1B-202ENST00000368436 IQCCQ4KMZ1 466 aa13.86□□□□□ -0.19
CKS1B-202ENST00000368436 ALG10BQ5I7T1 473 aa13.86□□□□□ -0.19
CKS1B-202ENST00000368436 PHYHD1Q5SRE7 291 aa13.86□□□□□ -0.19
CKS1B-202ENST00000368436 FAM91A1Q658Y4 838 aa13.86□□□□□ -0.19
CKS1B-202ENST00000368436 REEP3Q6NUK4 255 aa13.86□□□□□ -0.19
CKS1B-202ENST00000368436 ULK3Q6PHR2 472 aa13.86□□□□□ -0.19
CKS1B-202ENST00000368436 BLOC1S3Q6QNY0 202 aa13.86□□□□□ -0.19
CKS1B-202ENST00000368436 NHLRC1Q6VVB1 395 aa13.86□□□□□ -0.19
CKS1B-202ENST00000368436 MDP1Q86V88 176 aa13.86□□□□□ -0.19
CKS1B-202ENST00000368436 NFKBIDQ8NI38 313 aa13.86□□□□□ -0.19
CKS1B-202ENST00000368436 ANKRD27Q96NW4 1050 aa13.86□□□□□ -0.19
CKS1B-202ENST00000368436 SLC52A3Q9NQ40 469 aa13.86□□□□□ -0.19
CKS1B-202ENST00000368436 B3GNT2Q9NY97 397 aa13.86□□□□□ -0.19
CKS1B-202ENST00000368436 SLAMF8Q9P0V8 285 aa13.86□□□□□ -0.19
CKS1B-202ENST00000368436 USP22Q9UPT9 525 aa13.86□□□□□ -0.19
CKS1B-202ENST00000368436 A0A087WUJ7 227 aa13.85□□□□□ -0.19
CKS1B-202ENST00000368436 HPRP00739 348 aa13.85□□□□□ -0.19
CKS1B-202ENST00000368436 TGFAP01135 160 aa13.85□□□□□ -0.19
CKS1B-202ENST00000368436 TACSTD2P09758 323 aa13.85□□□□□ -0.19
CKS1B-202ENST00000368436 DAOP14920 347 aa13.85□□□□□ -0.19
CKS1B-202ENST00000368436 PPIBP23284 216 aaKnown RBP13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms