RNA–Protein interactions for RNA: ENST00000368226.8

PTPRK-207, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPRK, Length 6,087 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-207ENST00000368226 FAM71E1Q6IPT2 247 aa11.9□□□□□ -0.5
PTPRK-207ENST00000368226 NEURL3Q96EH8 262 aa11.9□□□□□ -0.5
PTPRK-207ENST00000368226 NOX4Q9NPH5 578 aa11.9□□□□□ -0.5
PTPRK-207ENST00000368226 TBX21Q9UL17 535 aa11.9□□□□□ -0.5
PTPRK-207ENST00000368226 MRPS2Q9Y399 296 aaKnown RBP11.9□□□□□ -0.5
PTPRK-207ENST00000368226 AGFG1P52594 562 aaKnown RBP11.9□□□□□ -0.51
PTPRK-207ENST00000368226 ILKQ13418 452 aa11.9□□□□□ -0.51
PTPRK-207ENST00000368226 DEFB109BQ30KR1 87 aa11.9□□□□□ -0.51
PTPRK-207ENST00000368226 AADACL3Q5VUY0 350 aa11.9□□□□□ -0.51
PTPRK-207ENST00000368226 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.9□□□□□ -0.51
PTPRK-207ENST00000368226 ZNF687Q8N1G0 1237 aa11.9□□□□□ -0.51
PTPRK-207ENST00000368226 OR6F1Q8NGZ6 308 aa11.9□□□□□ -0.51
PTPRK-207ENST00000368226 GHSRQ92847 366 aa11.9□□□□□ -0.51
PTPRK-207ENST00000368226 OR14A2Q96R54 314 aa11.9□□□□□ -0.51
PTPRK-207ENST00000368226 DCLRE1CQ96SD1 692 aaKnown RBP11.9□□□□□ -0.51
PTPRK-207ENST00000368226 NUBP2Q9Y5Y2 271 aa11.9□□□□□ -0.51
PTPRK-207ENST00000368226 LILRB5O75023 590 aa11.89□□□□□ -0.51
PTPRK-207ENST00000368226 MZT1Q08AG7 82 aa11.89□□□□□ -0.51
PTPRK-207ENST00000368226 PRTGQ2VWP7 1150 aa11.89□□□□□ -0.51
PTPRK-207ENST00000368226 NHSL2Q5HYW2 709 aa11.89□□□□□ -0.51
PTPRK-207ENST00000368226 DCXRQ7Z4W1 244 aa11.89□□□□□ -0.51
PTPRK-207ENST00000368226 UBE2FQ969M7 185 aa11.89□□□□□ -0.51
PTPRK-207ENST00000368226 FGGYQ96C11 551 aa11.89□□□□□ -0.51
PTPRK-207ENST00000368226 OR51B4Q9Y5P0 310 aa11.89□□□□□ -0.51
PTPRK-207ENST00000368226 MAST2Q6P0Q8 1798 aa11.89□□□□□ -0.51
PTPRK-207ENST00000368226 A0A1W2PNR3 127 aa11.89□□□□□ -0.51
PTPRK-207ENST00000368226 SLC5A10A0PJK1 596 aa11.89□□□□□ -0.51
PTPRK-207ENST00000368226 TSPAN15O95858 294 aa11.89□□□□□ -0.51
PTPRK-207ENST00000368226 HLA-AP01891 365 aaKnown RBP11.89□□□□□ -0.51
PTPRK-207ENST00000368226 TRIM23P36406 574 aa11.89□□□□□ -0.51
PTPRK-207ENST00000368226 SLC19A1P41440 591 aa11.89□□□□□ -0.51
PTPRK-207ENST00000368226 UBE2NLQ5JXB2 153 aa11.89□□□□□ -0.51
PTPRK-207ENST00000368226 PDZD9Q8IXQ8 264 aa11.89□□□□□ -0.51
PTPRK-207ENST00000368226 SCCPDHQ8NBX0 429 aa11.89□□□□□ -0.51
PTPRK-207ENST00000368226 STK35Q8TDR2 534 aa11.89□□□□□ -0.51
PTPRK-207ENST00000368226 ZBTB8AQ96BR9 441 aa11.89□□□□□ -0.51
PTPRK-207ENST00000368226 A4GALTQ9NPC4 353 aa11.89□□□□□ -0.51
PTPRK-207ENST00000368226 COA3Q9Y2R0 106 aaPredicted RBP11.89□□□□□ -0.51
PTPRK-207ENST00000368226 A0A1W2PR48 441 aa11.89□□□□□ -0.51
PTPRK-207ENST00000368226 ARHGAP33O14559 1287 aa11.89□□□□□ -0.51
PTPRK-207ENST00000368226 FGF17O60258 216 aa11.89□□□□□ -0.51
PTPRK-207ENST00000368226 TNFSF15O95150 251 aa11.89□□□□□ -0.51
PTPRK-207ENST00000368226 PTGER4P35408 488 aa11.89□□□□□ -0.51
PTPRK-207ENST00000368226 DMWDQ09019 674 aa11.89□□□□□ -0.51
PTPRK-207ENST00000368226 NKAIN4Q8IVV8 208 aa11.89□□□□□ -0.51
PTPRK-207ENST00000368226 BPIFB2Q8N4F0 458 aa11.89□□□□□ -0.51
PTPRK-207ENST00000368226 PARP16Q8N5Y8 322 aa11.89□□□□□ -0.51
PTPRK-207ENST00000368226 PLPP7Q8NBV4 271 aa11.89□□□□□ -0.51
PTPRK-207ENST00000368226 SECTM1Q8WVN6 248 aa11.89□□□□□ -0.51
PTPRK-207ENST00000368226 GPR160Q9UJ42 338 aa11.89□□□□□ -0.51
PTPRK-207ENST00000368226 GLI3P10071 1580 aa11.89□□□□□ -0.51
PTPRK-207ENST00000368226 A0A1W2PQ09 198 aa11.89□□□□□ -0.51
PTPRK-207ENST00000368226 PAHP00439 452 aa11.89□□□□□ -0.51
PTPRK-207ENST00000368226 MTHFD2P13995 350 aa11.89□□□□□ -0.51
PTPRK-207ENST00000368226 RAB6AP20340 208 aa11.89□□□□□ -0.51
PTPRK-207ENST00000368226 SLC1A3P43003 542 aa11.89□□□□□ -0.51
PTPRK-207ENST00000368226 TAS2R20P59543 309 aa11.89□□□□□ -0.51
PTPRK-207ENST00000368226 MLLT11Q13015 90 aaPredicted RBP11.89□□□□□ -0.51
PTPRK-207ENST00000368226 MEP1BQ16820 701 aa11.89□□□□□ -0.51
PTPRK-207ENST00000368226 METTL11BQ5VVY1 283 aa11.89□□□□□ -0.51
PTPRK-207ENST00000368226 DVL3Q92997 716 aaPredicted RBP11.89□□□□□ -0.51
PTPRK-207ENST00000368226 TMEM106AQ96A25 262 aa11.89□□□□□ -0.51
PTPRK-207ENST00000368226 GNG12Q9UBI6 72 aa11.89□□□□□ -0.51
PTPRK-207ENST00000368226 MRPS28Q9Y2Q9 187 aaKnown RBP11.89□□□□□ -0.51
PTPRK-207ENST00000368226 PCDHGA5Q9Y5G8 931 aa11.89□□□□□ -0.51
PTPRK-207ENST00000368226 CEPT1Q9Y6K0 416 aa11.89□□□□□ -0.51
PTPRK-207ENST00000368226 H7C2Y5 167 aa11.89□□□□□ -0.51
PTPRK-207ENST00000368226 YKT6O15498 198 aa11.89□□□□□ -0.51
PTPRK-207ENST00000368226 ZNF254O75437 659 aa11.89□□□□□ -0.51
PTPRK-207ENST00000368226 CTGFP29279 349 aa11.89□□□□□ -0.51
PTPRK-207ENST00000368226 TNFSF8P32971 234 aa11.89□□□□□ -0.51
PTPRK-207ENST00000368226 GABREP78334 506 aa11.89□□□□□ -0.51
PTPRK-207ENST00000368226 RPL22L1Q6P5R6 122 aaKnown RBP11.89□□□□□ -0.51
PTPRK-207ENST00000368226 TRILQ7L0X0 811 aa11.89□□□□□ -0.51
PTPRK-207ENST00000368226 OR6V1Q8N148 313 aa11.89□□□□□ -0.51
PTPRK-207ENST00000368226 LILRA2Q8N149 483 aa11.89□□□□□ -0.51
PTPRK-207ENST00000368226 STEAP2Q8NFT2 490 aa11.89□□□□□ -0.51
PTPRK-207ENST00000368226 OR1N1Q8NGS0 311 aa11.89□□□□□ -0.51
PTPRK-207ENST00000368226 LGALS14Q8TCE9 139 aa11.89□□□□□ -0.51
PTPRK-207ENST00000368226 VRK1Q99986 396 aaPredicted RBP11.89□□□□□ -0.51
PTPRK-207ENST00000368226 OR2B2Q9GZK3 357 aa11.89□□□□□ -0.51
PTPRK-207ENST00000368226 CNOT2Q9NZN8 540 aaKnown RBP11.89□□□□□ -0.51
PTPRK-207ENST00000368226 MMACHCQ9Y4U1 282 aa11.89□□□□□ -0.51
PTPRK-207ENST00000368226 SURF4O15260 269 aa11.88□□□□□ -0.51
PTPRK-207ENST00000368226 SERPINA7P05543 415 aa11.88□□□□□ -0.51
PTPRK-207ENST00000368226 SRFP11831 508 aa11.88□□□□□ -0.51
PTPRK-207ENST00000368226 OMGP23515 440 aa11.88□□□□□ -0.51
PTPRK-207ENST00000368226 DUSP2Q05923 314 aa11.88□□□□□ -0.51
PTPRK-207ENST00000368226 ARL6IP1Q15041 203 aa11.88□□□□□ -0.51
PTPRK-207ENST00000368226 TMEM196Q5HYL7 178 aa11.88□□□□□ -0.51
PTPRK-207ENST00000368226 C1orf140Q5VVS0 124 aa11.88□□□□□ -0.51
PTPRK-207ENST00000368226 HEPHL1Q6MZM0 1159 aa11.88□□□□□ -0.51
PTPRK-207ENST00000368226 LYPD4Q6UWN0 246 aa11.88□□□□□ -0.51
PTPRK-207ENST00000368226 ENTHD1Q8IYW4 607 aa11.88□□□□□ -0.51
PTPRK-207ENST00000368226 RNF113BQ8IZP6 322 aaKnown RBP11.88□□□□□ -0.51
PTPRK-207ENST00000368226 OR11L1Q8NGX0 322 aa11.88□□□□□ -0.51
PTPRK-207ENST00000368226 EPHX3Q9H6B9 360 aa11.88□□□□□ -0.51
PTPRK-207ENST00000368226 WDR76Q9H967 626 aa11.88□□□□□ -0.51
PTPRK-207ENST00000368226 HRASLSQ9HDD0 168 aa11.88□□□□□ -0.51
PTPRK-207ENST00000368226 EMC7Q9NPA0 242 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 146.8 ms