RNA–Protein interactions for RNA: ENST00000368019.5

USF1-201, Transcript of upstream transcription factor 1, humanhuman

TSL 5 BASIC

Gene USF1, Length 998 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-201ENST00000368019 OR2T4Q8NH00 348 aa10.55□□□□□ -0.72
USF1-201ENST00000368019 GPBAR1Q8TDU6 330 aa10.55□□□□□ -0.72
USF1-201ENST00000368019 GIMAP1Q8WWP7 306 aa10.55□□□□□ -0.72
USF1-201ENST00000368019 C16orf58Q96GQ5 468 aa10.55□□□□□ -0.72
USF1-201ENST00000368019 TEAD3Q99594 435 aa10.55□□□□□ -0.72
USF1-201ENST00000368019 AIFM2Q9BRQ8 373 aa10.55□□□□□ -0.72
USF1-201ENST00000368019 TIMM29Q9BSF4 260 aa10.55□□□□□ -0.72
USF1-201ENST00000368019 ZNF350Q9GZX5 532 aa10.55□□□□□ -0.72
USF1-201ENST00000368019 C20orf85Q9H1P6 137 aa10.55□□□□□ -0.72
USF1-201ENST00000368019 ADGRL4Q9HBW9 690 aa10.55□□□□□ -0.72
USF1-201ENST00000368019 CTPS2Q9NRF8 586 aa10.55□□□□□ -0.72
USF1-201ENST00000368019 STARD5Q9NSY2 213 aa10.55□□□□□ -0.72
USF1-201ENST00000368019 LRIT1Q9P2V4 623 aa10.55□□□□□ -0.72
USF1-201ENST00000368019 POMT2Q9UKY4 750 aa10.55□□□□□ -0.72
USF1-201ENST00000368019 PRELID1Q9Y255 219 aa10.55□□□□□ -0.72
USF1-201ENST00000368019 SIGLEC7Q9Y286 467 aa10.55□□□□□ -0.72
USF1-201ENST00000368019 PCDHGA9Q9Y5G4 932 aaKnown RBP10.55□□□□□ -0.72
USF1-201ENST00000368019 KCNE3Q9Y6H6 103 aa10.55□□□□□ -0.72
USF1-201ENST00000368019 IGKV1-8A0A0C4DH67 115 aa10.54□□□□□ -0.72
USF1-201ENST00000368019 hCG_1807616A0A1W2PRN6 198 aa10.54□□□□□ -0.72
USF1-201ENST00000368019 M0R233 179 aa10.54□□□□□ -0.72
USF1-201ENST00000368019 CDC42EP2O14613 210 aa10.54□□□□□ -0.72
USF1-201ENST00000368019 ERI3O43414 337 aaKnown RBP10.54□□□□□ -0.72
USF1-201ENST00000368019 PIP5K1CO60331 668 aa10.54□□□□□ -0.72
USF1-201ENST00000368019 TSC22D2O75157 780 aa10.54□□□□□ -0.72
USF1-201ENST00000368019 ERAL1O75616 437 aaKnown RBP10.54□□□□□ -0.72
USF1-201ENST00000368019 MPC2O95563 127 aa10.54□□□□□ -0.72
USF1-201ENST00000368019 OR2T7P0C7T2 308 aa10.54□□□□□ -0.72
USF1-201ENST00000368019 IFNGR1P15260 489 aa10.54□□□□□ -0.72
USF1-201ENST00000368019 NAGAP17050 411 aa10.54□□□□□ -0.72
USF1-201ENST00000368019 MAPK3P27361 379 aaPredicted RBP10.54□□□□□ -0.72
USF1-201ENST00000368019 BCL6P41182 706 aa10.54□□□□□ -0.72
USF1-201ENST00000368019 MC3RP41968 323 aa10.54□□□□□ -0.72
USF1-201ENST00000368019 RBM34P42696 430 aaKnown RBP10.54□□□□□ -0.72
USF1-201ENST00000368019 ZNF81P51508 661 aa10.54□□□□□ -0.72
USF1-201ENST00000368019 FXYD6P3P58550 94 aa10.54□□□□□ -0.72
USF1-201ENST00000368019 CDK3Q00526 305 aa10.54□□□□□ -0.72
USF1-201ENST00000368019 SNTB2Q13425 540 aaKnown RBP10.54□□□□□ -0.72
USF1-201ENST00000368019 INSL4Q14641 139 aa10.54□□□□□ -0.72
USF1-201ENST00000368019 CDK5R1Q15078 307 aa10.54□□□□□ -0.72
USF1-201ENST00000368019 B3GNTL1Q67FW5 361 aaPredicted RBP10.54□□□□□ -0.72
USF1-201ENST00000368019 RPL22L1Q6P5R6 122 aaKnown RBP10.54□□□□□ -0.72
USF1-201ENST00000368019 TMEM65Q6PI78 240 aa10.54□□□□□ -0.72
USF1-201ENST00000368019 ZNF574Q6ZN55 896 aaPredicted RBP10.54□□□□□ -0.72
USF1-201ENST00000368019 IQCF2Q8IXL9 164 aa10.54□□□□□ -0.72
USF1-201ENST00000368019 CCDC116Q8IYX3 515 aa10.54□□□□□ -0.72
USF1-201ENST00000368019 LINC01555Q8NAE3 123 aa10.54□□□□□ -0.72
USF1-201ENST00000368019 OR10H4Q8NGA5 316 aa10.54□□□□□ -0.72
USF1-201ENST00000368019 OR2T27Q8NH04 317 aa10.54□□□□□ -0.72
USF1-201ENST00000368019 NT5CQ8TCD5 201 aa10.54□□□□□ -0.72
USF1-201ENST00000368019 TMEM255BQ8WV15 326 aa10.54□□□□□ -0.72
USF1-201ENST00000368019 TMEM239Q8WW34 195 aa10.54□□□□□ -0.72
USF1-201ENST00000368019 RBPMSQ93062 196 aaKnown RBP10.54□□□□□ -0.72
USF1-201ENST00000368019 GAL3ST3Q96A11 431 aa10.54□□□□□ -0.72
USF1-201ENST00000368019 SMIM19Q96E16 107 aa10.54□□□□□ -0.72
USF1-201ENST00000368019 SLC35A4Q96G79 324 aa10.54□□□□□ -0.72
USF1-201ENST00000368019 C10orf90Q96M02 699 aa10.54□□□□□ -0.72
USF1-201ENST00000368019 RBP7Q96R05 134 aa10.54□□□□□ -0.72
USF1-201ENST00000368019 STACQ99469 402 aa10.54□□□□□ -0.72
USF1-201ENST00000368019 CMKLR1Q99788 373 aa10.54□□□□□ -0.72
USF1-201ENST00000368019 SEMA6CQ9H3T2 930 aa10.54□□□□□ -0.72
USF1-201ENST00000368019 GPN1Q9HCN4 374 aaPredicted RBP10.54□□□□□ -0.72
USF1-201ENST00000368019 MRPS30Q9NP92 439 aaKnown RBP10.54□□□□□ -0.72
USF1-201ENST00000368019 FOXJ2Q9P0K8 574 aa10.54□□□□□ -0.72
USF1-201ENST00000368019 RPS6KB2Q9UBS0 482 aa10.54□□□□□ -0.72
USF1-201ENST00000368019 SERTAD3Q9UJW9 196 aa10.54□□□□□ -0.72
USF1-201ENST00000368019 SLC7A7Q9UM01 511 aa10.54□□□□□ -0.72
USF1-201ENST00000368019 MED31Q9Y3C7 131 aa10.54□□□□□ -0.72
USF1-201ENST00000368019 WDR45Q9Y484 360 aa10.54□□□□□ -0.72
USF1-201ENST00000368019 ATG4BQ9Y4P1 393 aa10.54□□□□□ -0.72
USF1-201ENST00000368019 SESN1Q9Y6P5 492 aa10.54□□□□□ -0.72
USF1-201ENST00000368019 NUP210LQ5VU65 1888 aa10.53□□□□□ -0.72
USF1-201ENST00000368019 NBASA2RRP1 2371 aa10.53□□□□□ -0.72
USF1-201ENST00000368019 HEATR5BQ9P2D3 2071 aa10.53□□□□□ -0.72
USF1-201ENST00000368019 DOPEY2Q9Y3R5 2298 aa10.53□□□□□ -0.72
USF1-201ENST00000368019 A0A087WV62 115 aa10.53□□□□□ -0.72
USF1-201ENST00000368019 A0A1W2PPL8 197 aa10.53□□□□□ -0.72
USF1-201ENST00000368019 PRSS38A1L453 326 aa10.53□□□□□ -0.72
USF1-201ENST00000368019 PRR19A6NJB7 356 aa10.53□□□□□ -0.72
USF1-201ENST00000368019 HMSDA8MTL9 139 aa10.53□□□□□ -0.72
USF1-201ENST00000368019 ZNF879B4DU55 563 aa10.53□□□□□ -0.72
USF1-201ENST00000368019 KRBOX1C9JBD0 128 aa10.53□□□□□ -0.72
USF1-201ENST00000368019 G3V3Q6 166 aa10.53□□□□□ -0.72
USF1-201ENST00000368019 TERTO14746 1132 aaKnown RBP10.53□□□□□ -0.72
USF1-201ENST00000368019 B3GALNT1O75752 331 aa10.53□□□□□ -0.72
USF1-201ENST00000368019 RGS11O94810 467 aa10.53□□□□□ -0.72
USF1-201ENST00000368019 OR2A4O95047 310 aa10.53□□□□□ -0.72
USF1-201ENST00000368019 SLC2A10O95528 541 aa10.53□□□□□ -0.72
USF1-201ENST00000368019 WDPCPO95876 746 aa10.53□□□□□ -0.72
USF1-201ENST00000368019 ATP1B1P05026 303 aa10.53□□□□□ -0.72
USF1-201ENST00000368019 CEACAM5P06731 702 aa10.53□□□□□ -0.72
USF1-201ENST00000368019 CD3GP09693 182 aa10.53□□□□□ -0.72
USF1-201ENST00000368019 RAB40ALP0C0E4 278 aa10.53□□□□□ -0.72
USF1-201ENST00000368019 IFI30P13284 250 aa10.53□□□□□ -0.72
USF1-201ENST00000368019 CXCL3P19876 107 aa10.53□□□□□ -0.72
USF1-201ENST00000368019 PSMB1P20618 241 aaKnown RBP10.53□□□□□ -0.72
USF1-201ENST00000368019 PSMB5P28074 263 aa10.53□□□□□ -0.72
USF1-201ENST00000368019 CMPK1P30085 196 aa10.53□□□□□ -0.72
USF1-201ENST00000368019 SLC6A6P31641 620 aa10.53□□□□□ -0.72
USF1-201ENST00000368019 OR10A3P58181 314 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms