RNA–Protein interactions for RNA: ENST00000367142.4

NUCKS1-201, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUCKS1, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-201ENST00000367142 ADH4P08319 380 aa14.56□□□□□ -0.08
NUCKS1-201ENST00000367142 EN2P19622 333 aaPredicted RBP14.56□□□□□ -0.08
NUCKS1-201ENST00000367142 F2RP25116 425 aa14.56□□□□□ -0.08
NUCKS1-201ENST00000367142 SUB1P53999 127 aaKnown RBP eCLIP14.56□□□□□ -0.085e-7■■□□□ 11.5
NUCKS1-201ENST00000367142 LCN6P62502 163 aa14.56□□□□□ -0.08
NUCKS1-201ENST00000367142 GPLD1P80108 840 aa14.56□□□□□ -0.08
NUCKS1-201ENST00000367142 TLE4Q04727 773 aa14.56□□□□□ -0.08
NUCKS1-201ENST00000367142 TMEM130Q8N3G9 435 aa14.56□□□□□ -0.08
NUCKS1-201ENST00000367142 ST7LQ8TDW4 575 aa14.56□□□□□ -0.08
NUCKS1-201ENST00000367142 MITD1Q8WV92 249 aa14.56□□□□□ -0.08
NUCKS1-201ENST00000367142 KHSRPQ92945 711 aaKnown RBP eCLIP14.56□□□□□ -0.086e-7■■□□□ 12.2
NUCKS1-201ENST00000367142 PDLIM5Q96HC4 596 aaKnown RBP14.56□□□□□ -0.08
NUCKS1-201ENST00000367142 NOX4Q9NPH5 578 aa14.56□□□□□ -0.08
NUCKS1-201ENST00000367142 LCMT2O60294 686 aaKnown RBP14.56□□□□□ -0.08
NUCKS1-201ENST00000367142 ZNF728P0DKX0 622 aa14.56□□□□□ -0.08
NUCKS1-201ENST00000367142 NDUFB7P17568 137 aa14.56□□□□□ -0.08
NUCKS1-201ENST00000367142 MLLT11Q13015 90 aaPredicted RBP14.56□□□□□ -0.08
NUCKS1-201ENST00000367142 GGTA1PQ4G0N0 100 aa14.56□□□□□ -0.08
NUCKS1-201ENST00000367142 B3GLCTQ6Y288 498 aa14.56□□□□□ -0.08
NUCKS1-201ENST00000367142 TFAP2CQ92754 450 aa14.56□□□□□ -0.08
NUCKS1-201ENST00000367142 HRASLS5Q96KN8 279 aa14.56□□□□□ -0.08
NUCKS1-201ENST00000367142 RTL8AQ9BWD3 113 aa14.56□□□□□ -0.08
NUCKS1-201ENST00000367142 GM2AP17900 193 aa14.55□□□□□ -0.08
NUCKS1-201ENST00000367142 HOXD11P31277 338 aaPredicted RBP14.55□□□□□ -0.08
NUCKS1-201ENST00000367142 TGM4P49221 684 aa14.55□□□□□ -0.08
NUCKS1-201ENST00000367142 GNB2P62879 340 aa14.55□□□□□ -0.08
NUCKS1-201ENST00000367142 GRB2P62993 217 aaKnown RBP14.55□□□□□ -0.08
NUCKS1-201ENST00000367142 IER2Q9BTL4 223 aa14.55□□□□□ -0.08
NUCKS1-201ENST00000367142 ALG12Q9BV10 488 aa14.55□□□□□ -0.08
NUCKS1-201ENST00000367142 WWTR1Q9GZV5 400 aa14.55□□□□□ -0.08
NUCKS1-201ENST00000367142 TCEAL2Q9H3H9 227 aaPredicted RBP14.55□□□□□ -0.08
NUCKS1-201ENST00000367142 KIAA1456Q9P272 454 aa14.55□□□□□ -0.08
NUCKS1-201ENST00000367142 THAP10Q9P2Z0 257 aaPredicted RBP14.55□□□□□ -0.08
NUCKS1-201ENST00000367142 ATP23Q9Y6H3 246 aa14.55□□□□□ -0.08
NUCKS1-201ENST00000367142 ZNF749O43361 778 aa14.55□□□□□ -0.08
NUCKS1-201ENST00000367142 PLA2G7Q13093 441 aa14.55□□□□□ -0.08
NUCKS1-201ENST00000367142 KCTD11Q693B1 232 aa14.55□□□□□ -0.08
NUCKS1-201ENST00000367142 TERB2Q8NHR7 220 aa14.55□□□□□ -0.08
NUCKS1-201ENST00000367142 IFI44Q8TCB0 444 aa14.55□□□□□ -0.08
NUCKS1-201ENST00000367142 ABHD6Q9BV23 337 aa14.55□□□□□ -0.08
NUCKS1-201ENST00000367142 TPPP3Q9BW30 176 aa14.55□□□□□ -0.08
NUCKS1-201ENST00000367142 DLX5P56178 289 aa14.55□□□□□ -0.08
NUCKS1-201ENST00000367142 OR1D5P58170 312 aa14.55□□□□□ -0.08
NUCKS1-201ENST00000367142 ERVFC1P60507 584 aa14.55□□□□□ -0.08
NUCKS1-201ENST00000367142 EDDM3AQ14507 147 aa14.55□□□□□ -0.08
NUCKS1-201ENST00000367142 KANSL1Q7Z3B3 1105 aa14.55□□□□□ -0.08
NUCKS1-201ENST00000367142 EMG1Q92979 244 aaKnown RBP14.55□□□□□ -0.08
NUCKS1-201ENST00000367142 IP6K3Q96PC2 410 aa14.55□□□□□ -0.08
NUCKS1-201ENST00000367142 ISYNA1Q9NPH2 558 aa14.55□□□□□ -0.08
NUCKS1-201ENST00000367142 SH2D7A6NKC9 451 aaPredicted RBP14.55□□□□□ -0.08
NUCKS1-201ENST00000367142 SHISA7A6NL88 538 aa14.55□□□□□ -0.08
NUCKS1-201ENST00000367142 OR8G3PP0DMU2 310 aa14.55□□□□□ -0.08
NUCKS1-201ENST00000367142 MRPS34P82930 218 aaKnown RBP14.55□□□□□ -0.08
NUCKS1-201ENST00000367142 CSNK1G1Q9HCP0 422 aa14.55□□□□□ -0.08
NUCKS1-201ENST00000367142 GRPP07492 148 aa14.55□□□□□ -0.08
NUCKS1-201ENST00000367142 SLC35E2P0CK97 266 aa14.55□□□□□ -0.08
NUCKS1-201ENST00000367142 Q6ZTK2 550 aa14.55□□□□□ -0.08
NUCKS1-201ENST00000367142 SLC35D2Q76EJ3 337 aa14.55□□□□□ -0.08
NUCKS1-201ENST00000367142 SLC15A4Q8N697 577 aa14.55□□□□□ -0.08
NUCKS1-201ENST00000367142 TXNL4BQ9NX01 149 aaKnown RBP14.55□□□□□ -0.08
NUCKS1-201ENST00000367142 PMS2P1A4D2B8 440 aa14.54□□□□□ -0.08
NUCKS1-201ENST00000367142 BLVRBP30043 206 aaPredicted RBP14.54□□□□□ -0.08
NUCKS1-201ENST00000367142 TMEM31Q5JXX7 168 aa14.54□□□□□ -0.08
NUCKS1-201ENST00000367142 MBOAT2Q6ZWT7 520 aa14.54□□□□□ -0.08
NUCKS1-201ENST00000367142 FAM166BA8MTA8 275 aa14.54□□□□□ -0.08
NUCKS1-201ENST00000367142 SNAPINO95295 136 aa14.54□□□□□ -0.08
NUCKS1-201ENST00000367142 HBE1P02100 147 aa14.54□□□□□ -0.08
NUCKS1-201ENST00000367142 IL34Q6ZMJ4 242 aa14.54□□□□□ -0.08
NUCKS1-201ENST00000367142 NCCRP1Q6ZVX7 275 aaPredicted RBP14.54□□□□□ -0.08
NUCKS1-201ENST00000367142 FCRLAQ7L513 359 aa14.54□□□□□ -0.08
NUCKS1-201ENST00000367142 HS3ST2Q9Y278 367 aa14.54□□□□□ -0.08
NUCKS1-201ENST00000367142 IFT172Q9UG01 1749 aa14.54□□□□□ -0.08
NUCKS1-201ENST00000367142 LRIT2A6NDA9 550 aa14.54□□□□□ -0.08
NUCKS1-201ENST00000367142 DVL1O14640 695 aa14.54□□□□□ -0.08
NUCKS1-201ENST00000367142 DOK2O60496 412 aa14.54□□□□□ -0.08
NUCKS1-201ENST00000367142 SNRNP70P08621 437 aaKnown RBP14.54□□□□□ -0.08
NUCKS1-201ENST00000367142 DVL1P1P54792 670 aaPredicted RBP14.54□□□□□ -0.08
NUCKS1-201ENST00000367142 OR4F15Q8NGB8 312 aa14.54□□□□□ -0.08
NUCKS1-201ENST00000367142 PDLIM7Q9NR12 457 aa14.54□□□□□ -0.08
NUCKS1-201ENST00000367142 GABRPO00591 440 aa14.54□□□□□ -0.08
NUCKS1-201ENST00000367142 TRAF3IP2O43734 574 aaPredicted RBP14.54□□□□□ -0.08
NUCKS1-201ENST00000367142 SSTR4P31391 388 aa14.54□□□□□ -0.08
NUCKS1-201ENST00000367142 SERPINF1P36955 418 aa14.54□□□□□ -0.08
NUCKS1-201ENST00000367142 YOD1Q5VVQ6 348 aaPredicted RBP14.54□□□□□ -0.08
NUCKS1-201ENST00000367142 SLC22A24Q8N4F4 322 aa14.54□□□□□ -0.08
NUCKS1-201ENST00000367142 C3orf58Q8NDZ4 430 aa14.54□□□□□ -0.08
NUCKS1-201ENST00000367142 PEAK1Q9H792 1746 aa14.54□□□□□ -0.08
NUCKS1-201ENST00000367142 ZNF133P52736 654 aaPredicted RBP14.54□□□□□ -0.08
NUCKS1-201ENST00000367142 TMEM52BQ4KMG9 183 aa14.54□□□□□ -0.08
NUCKS1-201ENST00000367142 SKA3Q8IX90 412 aa14.54□□□□□ -0.08
NUCKS1-201ENST00000367142 LRRC56Q8IYG6 542 aaPredicted RBP14.54□□□□□ -0.08
NUCKS1-201ENST00000367142 CISD2Q8N5K1 135 aaKnown RBP14.54□□□□□ -0.08
NUCKS1-201ENST00000367142 C15orf54Q8N8G6 183 aa14.54□□□□□ -0.08
NUCKS1-201ENST00000367142 ZBP1Q9H171 429 aa14.54□□□□□ -0.08
NUCKS1-201ENST00000367142 ANKRD10Q9NXR5 420 aa14.54□□□□□ -0.08
NUCKS1-201ENST00000367142 PROCRQ9UNN8 238 aa14.54□□□□□ -0.08
NUCKS1-201ENST00000367142 FOXD2O60548 495 aaPredicted RBP14.53□□□□□ -0.08
NUCKS1-201ENST00000367142 MC2RQ01718 297 aa14.53□□□□□ -0.08
NUCKS1-201ENST00000367142 APOOLQ6UXV4 268 aa14.53□□□□□ -0.08
NUCKS1-201ENST00000367142 ADAMTS5Q9UNA0 930 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms