RNA–Protein interactions for RNA: ENST00000366769.7

CDC42BPA-205, Transcript of CDC42 binding protein kinase alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-205ENST00000366769 PDZD7Q9H5P4 517 aa10.33□□□□□ -0.76
CDC42BPA-205ENST00000366769 DUSP22Q9NRW4 184 aa10.33□□□□□ -0.76
CDC42BPA-205ENST00000366769 PIGBOS1A0A0B4J2F0 54 aa10.33□□□□□ -0.76
CDC42BPA-205ENST00000366769 NID1P14543 1247 aa10.33□□□□□ -0.76
CDC42BPA-205ENST00000366769 HMGCLP35914 325 aa10.33□□□□□ -0.76
CDC42BPA-205ENST00000366769 RPS15P62841 145 aaKnown RBP10.33□□□□□ -0.76
CDC42BPA-205ENST00000366769 KIAA1958Q8N8K9 716 aa10.33□□□□□ -0.76
CDC42BPA-205ENST00000366769 KCTD13Q8WZ19 329 aa10.33□□□□□ -0.76
CDC42BPA-205ENST00000366769 KCNK12Q9HB15 430 aa10.33□□□□□ -0.76
CDC42BPA-205ENST00000366769 ZFP92A6NM28 416 aa10.33□□□□□ -0.76
CDC42BPA-205ENST00000366769 NXPH3O95157 252 aa10.33□□□□□ -0.76
CDC42BPA-205ENST00000366769 RDH10Q8IZV5 341 aa10.33□□□□□ -0.76
CDC42BPA-205ENST00000366769 C9orf62Q8N4C0 152 aa10.33□□□□□ -0.76
CDC42BPA-205ENST00000366769 OR9A4Q8NGU2 314 aa10.33□□□□□ -0.76
CDC42BPA-205ENST00000366769 AKIRIN1Q9H9L7 192 aaPredicted RBP10.33□□□□□ -0.76
CDC42BPA-205ENST00000366769 MEGF6O75095 1541 aa10.33□□□□□ -0.76
CDC42BPA-205ENST00000366769 FDXRP22570 491 aa10.33□□□□□ -0.76
CDC42BPA-205ENST00000366769 UQCRC2P22695 453 aa10.33□□□□□ -0.76
CDC42BPA-205ENST00000366769 USP53Q70EK8 1073 aa10.33□□□□□ -0.76
CDC42BPA-205ENST00000366769 HSPB6O14558 160 aa10.33□□□□□ -0.76
CDC42BPA-205ENST00000366769 PMM2O15305 246 aa10.33□□□□□ -0.76
CDC42BPA-205ENST00000366769 ETV6P41212 452 aa10.33□□□□□ -0.76
CDC42BPA-205ENST00000366769 PMS2P11Q13670 270 aa10.33□□□□□ -0.76
CDC42BPA-205ENST00000366769 MRPL21Q7Z2W9 205 aaKnown RBP10.33□□□□□ -0.76
CDC42BPA-205ENST00000366769 PPP1R3BQ86XI6 285 aa10.33□□□□□ -0.76
CDC42BPA-205ENST00000366769 CHTF18Q8WVB6 975 aa10.33□□□□□ -0.76
CDC42BPA-205ENST00000366769 GCH1P30793 250 aa10.33□□□□□ -0.76
CDC42BPA-205ENST00000366769 IQCJQ1A5X6 159 aa10.33□□□□□ -0.76
CDC42BPA-205ENST00000366769 AAK1Q2M2I8 961 aa10.33□□□□□ -0.76
CDC42BPA-205ENST00000366769 FBXW12Q6X9E4 464 aa10.33□□□□□ -0.76
CDC42BPA-205ENST00000366769 SRRQ9GZT4 340 aa10.33□□□□□ -0.76
CDC42BPA-205ENST00000366769 DIMT1Q9UNQ2 313 aaKnown RBP10.33□□□□□ -0.76
CDC42BPA-205ENST00000366769 PLSCR5A0PG75 271 aa10.33□□□□□ -0.76
CDC42BPA-205ENST00000366769 SERPINA5P05154 406 aa10.33□□□□□ -0.76
CDC42BPA-205ENST00000366769 PFKMP08237 780 aa10.33□□□□□ -0.76
CDC42BPA-205ENST00000366769 LAP3P28838 519 aa10.33□□□□□ -0.76
CDC42BPA-205ENST00000366769 SLC10A2Q12908 348 aaPredicted RBP10.33□□□□□ -0.76
CDC42BPA-205ENST00000366769 LEXMQ3ZCV2 418 aa10.33□□□□□ -0.76
CDC42BPA-205ENST00000366769 OR6V1Q8N148 313 aa10.33□□□□□ -0.76
CDC42BPA-205ENST00000366769 OR9A1PQ8NGU1 263 aa10.33□□□□□ -0.76
CDC42BPA-205ENST00000366769 SYT3Q9BQG1 590 aa10.33□□□□□ -0.76
CDC42BPA-205ENST00000366769 CSNK1G3Q9Y6M4 447 aa10.33□□□□□ -0.76
CDC42BPA-205ENST00000366769 HRO43593 1189 aa10.32□□□□□ -0.76
CDC42BPA-205ENST00000366769 NUDT21O43809 227 aaKnown RBP10.32□□□□□ -0.76
CDC42BPA-205ENST00000366769 CST2P09228 141 aa10.32□□□□□ -0.76
CDC42BPA-205ENST00000366769 CASP7P55210 303 aa10.32□□□□□ -0.76
CDC42BPA-205ENST00000366769 CLDN19Q8N6F1 224 aa10.32□□□□□ -0.76
CDC42BPA-205ENST00000366769 OR52B4Q8NGK2 314 aa10.32□□□□□ -0.76
CDC42BPA-205ENST00000366769 HRASLSQ9HDD0 168 aa10.32□□□□□ -0.76
CDC42BPA-205ENST00000366769 ZNF275Q9NSD4 429 aaPredicted RBP10.32□□□□□ -0.76
CDC42BPA-205ENST00000366769 WNT6Q9Y6F9 365 aa10.32□□□□□ -0.76
CDC42BPA-205ENST00000366769 C1GALT1C1LP0DN25 315 aa10.32□□□□□ -0.76
CDC42BPA-205ENST00000366769 PCGF2P35227 344 aa10.32□□□□□ -0.76
CDC42BPA-205ENST00000366769 RPL24P83731 157 aaKnown RBP10.32□□□□□ -0.76
CDC42BPA-205ENST00000366769 HSF1Q00613 529 aa10.32□□□□□ -0.76
CDC42BPA-205ENST00000366769 HACD4Q5VWC8 232 aa10.32□□□□□ -0.76
CDC42BPA-205ENST00000366769 UBE2FQ969M7 185 aa10.32□□□□□ -0.76
CDC42BPA-205ENST00000366769 OR6C68A6NDL8 312 aa10.32□□□□□ -0.76
CDC42BPA-205ENST00000366769 M0R3H8 397 aa10.32□□□□□ -0.76
CDC42BPA-205ENST00000366769 NSA2O95478 260 aaKnown RBP10.32□□□□□ -0.76
CDC42BPA-205ENST00000366769 SLC22A6Q4U2R8 563 aa10.32□□□□□ -0.76
CDC42BPA-205ENST00000366769 OR2W3Q7Z3T1 314 aa10.32□□□□□ -0.76
CDC42BPA-205ENST00000366769 C6orf120Q7Z4R8 191 aa10.32□□□□□ -0.76
CDC42BPA-205ENST00000366769 NANOS1Q8WY41 292 aaKnown RBP10.32□□□□□ -0.76
CDC42BPA-205ENST00000366769 ANKRD19PQ9H560 264 aa10.32□□□□□ -0.76
CDC42BPA-205ENST00000366769 ZNF586Q9NXT0 402 aa10.32□□□□□ -0.76
CDC42BPA-205ENST00000366769 CNOT2Q9NZN8 540 aaKnown RBP10.32□□□□□ -0.76
CDC42BPA-205ENST00000366769 CHRM4P08173 479 aa10.32□□□□□ -0.76
CDC42BPA-205ENST00000366769 ACVRL1P37023 503 aa10.32□□□□□ -0.76
CDC42BPA-205ENST00000366769 RAB11AP62491 216 aa10.32□□□□□ -0.76
CDC42BPA-205ENST00000366769 RANP62826 216 aaKnown RBP10.32□□□□□ -0.76
CDC42BPA-205ENST00000366769 LIPJQ5W064 366 aa10.32□□□□□ -0.76
CDC42BPA-205ENST00000366769 ZNF765Q7L2R6 523 aa10.32□□□□□ -0.76
CDC42BPA-205ENST00000366769 TEX26Q8N6G2 289 aa10.32□□□□□ -0.76
CDC42BPA-205ENST00000366769 NUP43Q8NFH3 380 aa10.32□□□□□ -0.76
CDC42BPA-205ENST00000366769 OR4K5Q8NGD3 323 aa10.32□□□□□ -0.76
CDC42BPA-205ENST00000366769 UCN3Q969E3 161 aa10.32□□□□□ -0.76
CDC42BPA-205ENST00000366769 SENP5Q96HI0 755 aaPredicted RBP10.32□□□□□ -0.76
CDC42BPA-205ENST00000366769 SNX22Q96L94 193 aa10.32□□□□□ -0.76
CDC42BPA-205ENST00000366769 ZNF541Q9H0D2 1346 aa10.32□□□□□ -0.76
CDC42BPA-205ENST00000366769 TUBAL3A6NHL2 446 aa10.32□□□□□ -0.76
CDC42BPA-205ENST00000366769 GPX5O75715 221 aa10.32□□□□□ -0.76
CDC42BPA-205ENST00000366769 ADARB1P78563 741 aaKnown RBP10.32□□□□□ -0.76
CDC42BPA-205ENST00000366769 KCTD11Q693B1 232 aa10.32□□□□□ -0.76
CDC42BPA-205ENST00000366769 FJX1Q86VR8 437 aa10.32□□□□□ -0.76
CDC42BPA-205ENST00000366769 SPTSSAQ969W0 71 aa10.32□□□□□ -0.76
CDC42BPA-205ENST00000366769 TRMT2BQ96GJ1 504 aaKnown RBP10.32□□□□□ -0.76
CDC42BPA-205ENST00000366769 YLPM1P49750 1951 aaKnown RBP10.32□□□□□ -0.76
CDC42BPA-205ENST00000366769 HMX2A2RU54 273 aa10.32□□□□□ -0.76
CDC42BPA-205ENST00000366769 YJEFN3A6XGL0 299 aa10.32□□□□□ -0.76
CDC42BPA-205ENST00000366769 RNF212BA8MTL3 300 aa10.32□□□□□ -0.76
CDC42BPA-205ENST00000366769 RPS18P62269 152 aaKnown RBP10.32□□□□□ -0.76
CDC42BPA-205ENST00000366769 SLC16A12Q6ZSM3 486 aa10.32□□□□□ -0.76
CDC42BPA-205ENST00000366769 SHISA4Q96DD7 197 aa10.32□□□□□ -0.76
CDC42BPA-205ENST00000366769 MN1Q10571 1320 aaPredicted RBP10.32□□□□□ -0.76
CDC42BPA-205ENST00000366769 GABRA4P48169 554 aa10.32□□□□□ -0.76
CDC42BPA-205ENST00000366769 BAMBIQ13145 260 aa10.32□□□□□ -0.76
CDC42BPA-205ENST00000366769 SLC14A1Q13336 389 aa10.32□□□□□ -0.76
CDC42BPA-205ENST00000366769 OR2A2Q6IF42 318 aa10.32□□□□□ -0.76
CDC42BPA-205ENST00000366769 NRMQ8IXM6 262 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms