RNA–Protein interactions for RNA: ENST00000361804.4

SMC3-201, Transcript of structural maintenance of chromosomes 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC3, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-201ENST00000361804 VSIG10L2P0DP72 767 aa9.66□□□□□ -0.86
SMC3-201ENST00000361804 ARHGDIBP52566 201 aa9.66□□□□□ -0.86
SMC3-201ENST00000361804 C1orf61Q13536 156 aa9.66□□□□□ -0.86
SMC3-201ENST00000361804 DCAF12L2Q5VW00 463 aa9.66□□□□□ -0.86
SMC3-201ENST00000361804 BIVMQ86UB2 503 aa9.66□□□□□ -0.86
SMC3-201ENST00000361804 TMPRSS12Q86WS5 348 aa9.66□□□□□ -0.86
SMC3-201ENST00000361804 GINS4Q9BRT9 223 aa9.66□□□□□ -0.86
SMC3-201ENST00000361804 DUSP22Q9NRW4 184 aa9.66□□□□□ -0.86
SMC3-201ENST00000361804 ABRACLQ9P1F3 81 aa9.66□□□□□ -0.86
SMC3-201ENST00000361804 ENTPD2Q9Y5L3 495 aa9.66□□□□□ -0.86
SMC3-201ENST00000361804 KHNYNO15037 678 aaKnown RBP9.66□□□□□ -0.86
SMC3-201ENST00000361804 ARL6IP5O75915 188 aa9.66□□□□□ -0.86
SMC3-201ENST00000361804 IFNGP01579 166 aa9.66□□□□□ -0.86
SMC3-201ENST00000361804 NUDT1P36639 197 aa9.66□□□□□ -0.86
SMC3-201ENST00000361804 PITPNAQ00169 270 aa9.66□□□□□ -0.86
SMC3-201ENST00000361804 STX4Q12846 297 aa9.66□□□□□ -0.86
SMC3-201ENST00000361804 PWWP2BQ6NUJ5 590 aa9.66□□□□□ -0.86
SMC3-201ENST00000361804 ARHGAP11AQ6P4F7 1023 aa9.66□□□□□ -0.86
SMC3-201ENST00000361804 TMEM184AQ6ZMB5 413 aa9.66□□□□□ -0.86
SMC3-201ENST00000361804 C7orf61Q8IZ16 206 aa9.66□□□□□ -0.86
SMC3-201ENST00000361804 CHST6Q9GZX3 395 aa9.66□□□□□ -0.86
SMC3-201ENST00000361804 MRPL39Q9NYK5 338 aaKnown RBP9.66□□□□□ -0.86
SMC3-201ENST00000361804 ICAM5Q9UMF0 924 aa9.66□□□□□ -0.86
SMC3-201ENST00000361804 FOXJ3Q9UPW0 622 aa9.66□□□□□ -0.86
SMC3-201ENST00000361804 NUP210LQ5VU65 1888 aa9.66□□□□□ -0.86
SMC3-201ENST00000361804 ZNF879B4DU55 563 aa9.65□□□□□ -0.86
SMC3-201ENST00000361804 B8ZZF3 427 aa9.65□□□□□ -0.86
SMC3-201ENST00000361804 NDUFB2O95178 105 aa9.65□□□□□ -0.86
SMC3-201ENST00000361804 AGR2O95994 175 aa9.65□□□□□ -0.86
SMC3-201ENST00000361804 UBL4AP11441 157 aa9.65□□□□□ -0.86
SMC3-201ENST00000361804 MAOAP21397 527 aa9.65□□□□□ -0.86
SMC3-201ENST00000361804 ITPKBP27987 946 aa9.65□□□□□ -0.86
SMC3-201ENST00000361804 SQSTM1Q13501 440 aa9.65□□□□□ -0.86
SMC3-201ENST00000361804 CBLN3Q6UW01 205 aa9.65□□□□□ -0.86
SMC3-201ENST00000361804 IDO2Q6ZQW0 420 aa9.65□□□□□ -0.86
SMC3-201ENST00000361804 CA13Q8N1Q1 262 aa9.65□□□□□ -0.86
SMC3-201ENST00000361804 MEIOBQ8N635 442 aa9.65□□□□□ -0.86
SMC3-201ENST00000361804 SPERTQ8NA61 448 aa9.65□□□□□ -0.86
SMC3-201ENST00000361804 ZBTB44Q8NCP5 570 aa9.65□□□□□ -0.86
SMC3-201ENST00000361804 ZDHHC1Q8WTX9 485 aa9.65□□□□□ -0.86
SMC3-201ENST00000361804 AMELYQ99218 206 aa9.65□□□□□ -0.86
SMC3-201ENST00000361804 ZFYVE21Q9BQ24 234 aa9.65□□□□□ -0.86
SMC3-201ENST00000361804 WDR76Q9H967 626 aa9.65□□□□□ -0.86
SMC3-201ENST00000361804 INPP5EQ9NRR6 644 aa9.65□□□□□ -0.86
SMC3-201ENST00000361804 A6NCN8 305 aa9.65□□□□□ -0.86
SMC3-201ENST00000361804 KRT33AO76009 404 aa9.65□□□□□ -0.86
SMC3-201ENST00000361804 IFNA7P01567 189 aa9.65□□□□□ -0.86
SMC3-201ENST00000361804 RLN1P04808 185 aa9.65□□□□□ -0.86
SMC3-201ENST00000361804 OR2T7P0C7T2 308 aa9.65□□□□□ -0.86
SMC3-201ENST00000361804 TSFMP43897 325 aaKnown RBP9.65□□□□□ -0.86
SMC3-201ENST00000361804 H2BFSP57053 126 aa9.65□□□□□ -0.86
SMC3-201ENST00000361804 PSMA6P60900 246 aaKnown RBP9.65□□□□□ -0.86
SMC3-201ENST00000361804 STPG2Q8N412 459 aa9.65□□□□□ -0.86
SMC3-201ENST00000361804 TOR1AIP2Q8NFQ8 470 aa9.65□□□□□ -0.86
SMC3-201ENST00000361804 OR2T27Q8NH04 317 aa9.65□□□□□ -0.86
SMC3-201ENST00000361804 NT5CQ8TCD5 201 aa9.65□□□□□ -0.86
SMC3-201ENST00000361804 RERGQ96A58 199 aaPredicted RBP9.65□□□□□ -0.86
SMC3-201ENST00000361804 BMFQ96LC9 184 aa9.65□□□□□ -0.86
SMC3-201ENST00000361804 TRAF4Q9BUZ4 470 aaPredicted RBP9.65□□□□□ -0.86
SMC3-201ENST00000361804 ZMAT3Q9HA38 289 aaKnown RBP9.65□□□□□ -0.86
SMC3-201ENST00000361804 IKZF2Q9UKS7 526 aa9.65□□□□□ -0.86
SMC3-201ENST00000361804 GTF2A1LQ9UNN4 478 aa9.65□□□□□ -0.86
SMC3-201ENST00000361804 PCNX3Q9H6A9 2034 aa9.65□□□□□ -0.86
SMC3-201ENST00000361804 RTTNQ86VV8 2226 aa9.65□□□□□ -0.87
SMC3-201ENST00000361804 FXYD6-FXYD2A0A087WZ82 144 aa9.65□□□□□ -0.87
SMC3-201ENST00000361804 CARNS1A5YM72 827 aa9.65□□□□□ -0.87
SMC3-201ENST00000361804 LIPCP11150 499 aa9.65□□□□□ -0.87
SMC3-201ENST00000361804 ACTC1P68032 377 aa9.65□□□□□ -0.87
SMC3-201ENST00000361804 ACTA1P68133 377 aa9.65□□□□□ -0.87
SMC3-201ENST00000361804 CBFBQ13951 182 aa9.65□□□□□ -0.87
SMC3-201ENST00000361804 TUSC1Q2TAM9 212 aa9.65□□□□□ -0.87
SMC3-201ENST00000361804 LIPNQ5VXI9 398 aa9.65□□□□□ -0.87
SMC3-201ENST00000361804 ZNF613Q6PF04 617 aa9.65□□□□□ -0.87
SMC3-201ENST00000361804 BPHLQ86WA6 291 aaPredicted RBP9.65□□□□□ -0.87
SMC3-201ENST00000361804 CSNK1A1LQ8N752 337 aa9.65□□□□□ -0.87
SMC3-201ENST00000361804 WBP1Q96G27 269 aa9.65□□□□□ -0.87
SMC3-201ENST00000361804 MICU1Q9BPX6 476 aa9.65□□□□□ -0.87
SMC3-201ENST00000361804 FXYD6Q9H0Q3 95 aa9.65□□□□□ -0.87
SMC3-201ENST00000361804 HRASLS2Q9NWW9 162 aa9.65□□□□□ -0.87
SMC3-201ENST00000361804 TAS2R10Q9NYW0 307 aa9.65□□□□□ -0.87
SMC3-201ENST00000361804 FRRS1LQ9P0K9 344 aa9.65□□□□□ -0.87
SMC3-201ENST00000361804 RRASP10301 218 aa9.64□□□□□ -0.87
SMC3-201ENST00000361804 DIO1P49895 249 aa9.64□□□□□ -0.87
SMC3-201ENST00000361804 SLC22A10Q63ZE4 541 aa9.64□□□□□ -0.87
SMC3-201ENST00000361804 B3GNTL1Q67FW5 361 aaPredicted RBP9.64□□□□□ -0.87
SMC3-201ENST00000361804 ZNF776Q68DI1 518 aaPredicted RBP9.64□□□□□ -0.87
SMC3-201ENST00000361804 RPL22L1Q6P5R6 122 aaKnown RBP9.64□□□□□ -0.87
SMC3-201ENST00000361804 STAC2Q6ZMT1 411 aa9.64□□□□□ -0.87
SMC3-201ENST00000361804 FGD2Q7Z6J4 655 aa9.64□□□□□ -0.87
SMC3-201ENST00000361804 ARHGEF39Q8N4T4 335 aa9.64□□□□□ -0.87
SMC3-201ENST00000361804 BOLLQ8N9W6 283 aaKnown RBP9.64□□□□□ -0.87
SMC3-201ENST00000361804 AVL9Q8NBF6 648 aa9.64□□□□□ -0.87
SMC3-201ENST00000361804 RSC1A1Q92681 617 aa9.64□□□□□ -0.87
SMC3-201ENST00000361804 SGTBQ96EQ0 304 aa9.64□□□□□ -0.87
SMC3-201ENST00000361804 ZNF426Q9BUY5 554 aa9.64□□□□□ -0.87
SMC3-201ENST00000361804 ALG12Q9BV10 488 aa9.64□□□□□ -0.87
SMC3-201ENST00000361804 GSX2Q9BZM3 304 aa9.64□□□□□ -0.87
SMC3-201ENST00000361804 POMT2Q9UKY4 750 aa9.64□□□□□ -0.87
SMC3-201ENST00000361804 SLC6A5Q9Y345 797 aa9.64□□□□□ -0.87
SMC3-201ENST00000361804 AUP1Q9Y679 476 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms