RNA–Protein interactions for RNA: ENST00000361654.8

CLIP1-203, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 5,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-203ENST00000361654 TMEM211Q6ICI0 200 aa10.14□□□□□ -0.79
CLIP1-203ENST00000361654 LCN10Q6JVE6 187 aa10.14□□□□□ -0.79
CLIP1-203ENST00000361654 PHC2Q8IXK0 858 aa10.14□□□□□ -0.79
CLIP1-203ENST00000361654 SLC43A2Q8N370 569 aa10.14□□□□□ -0.79
CLIP1-203ENST00000361654 SLC35G3Q8N808 338 aa10.14□□□□□ -0.79
CLIP1-203ENST00000361654 BBS1Q8NFJ9 593 aa10.14□□□□□ -0.79
CLIP1-203ENST00000361654 SLC39A7Q92504 469 aa10.14□□□□□ -0.79
CLIP1-203ENST00000361654 PDXPQ96GD0 296 aa10.14□□□□□ -0.79
CLIP1-203ENST00000361654 LIN37Q96GY3 246 aaPredicted RBP10.14□□□□□ -0.79
CLIP1-203ENST00000361654 FIZ1Q96SL8 496 aa10.14□□□□□ -0.79
CLIP1-203ENST00000361654 ZIC5Q96T25 663 aa10.14□□□□□ -0.79
CLIP1-203ENST00000361654 RAB6CQ9H0N0 254 aa10.14□□□□□ -0.79
CLIP1-203ENST00000361654 POLDIP2Q9Y2S7 368 aa10.14□□□□□ -0.79
CLIP1-203ENST00000361654 A0A1W2PPC4 97 aa10.13□□□□□ -0.79
CLIP1-203ENST00000361654 F5H5P2 479 aa10.13□□□□□ -0.79
CLIP1-203ENST00000361654 ZNF728P0DKX0 622 aa10.13□□□□□ -0.79
CLIP1-203ENST00000361654 BLOC1S1P78537 153 aa10.13□□□□□ -0.79
CLIP1-203ENST00000361654 FXNQ16595 210 aa10.13□□□□□ -0.79
CLIP1-203ENST00000361654 CDONQ4KMG0 1287 aa10.13□□□□□ -0.79
CLIP1-203ENST00000361654 FAM74A1Q5RGS3 127 aa10.13□□□□□ -0.79
CLIP1-203ENST00000361654 METAP1DQ6UB28 335 aaPredicted RBP10.13□□□□□ -0.79
CLIP1-203ENST00000361654 CD300LGQ6UXG3 332 aa10.13□□□□□ -0.79
CLIP1-203ENST00000361654 FAM217AQ8IXS0 508 aa10.13□□□□□ -0.79
CLIP1-203ENST00000361654 FRZBQ92765 325 aa10.13□□□□□ -0.79
CLIP1-203ENST00000361654 MVB12AQ96EY5 273 aa10.13□□□□□ -0.79
CLIP1-203ENST00000361654 MS4A8Q9BY19 250 aa10.13□□□□□ -0.79
CLIP1-203ENST00000361654 MED17Q9NVC6 651 aa10.13□□□□□ -0.79
CLIP1-203ENST00000361654 TUSC2O75896 110 aa10.13□□□□□ -0.79
CLIP1-203ENST00000361654 RAB40ALP0C0E4 278 aa10.13□□□□□ -0.79
CLIP1-203ENST00000361654 ARAFP10398 606 aa10.13□□□□□ -0.79
CLIP1-203ENST00000361654 IMPA1P29218 277 aa10.13□□□□□ -0.79
CLIP1-203ENST00000361654 PTGER1P34995 402 aa10.13□□□□□ -0.79
CLIP1-203ENST00000361654 TSPAN31Q12999 210 aa10.13□□□□□ -0.79
CLIP1-203ENST00000361654 DND1Q8IYX4 353 aaKnown RBP10.13□□□□□ -0.79
CLIP1-203ENST00000361654 FBXL14Q8N1E6 418 aa10.13□□□□□ -0.79
CLIP1-203ENST00000361654 L3MBTL4Q8NA19 623 aa10.13□□□□□ -0.79
CLIP1-203ENST00000361654 ABHD4Q8TB40 342 aa10.13□□□□□ -0.79
CLIP1-203ENST00000361654 RAB40AQ8WXH6 277 aa10.13□□□□□ -0.79
CLIP1-203ENST00000361654 DCLRE1CQ96SD1 692 aaKnown RBP10.13□□□□□ -0.79
CLIP1-203ENST00000361654 DCAF13Q9NV06 445 aaKnown RBP10.13□□□□□ -0.79
CLIP1-203ENST00000361654 SMOXQ9NWM0 555 aa10.13□□□□□ -0.79
CLIP1-203ENST00000361654 BABAM2Q9NXR7 383 aa10.13□□□□□ -0.79
CLIP1-203ENST00000361654 WNT16Q9UBV4 365 aa10.13□□□□□ -0.79
CLIP1-203ENST00000361654 M0R1B8 84 aa10.13□□□□□ -0.79
CLIP1-203ENST00000361654 ITGBL1O95965 494 aaPredicted RBP10.13□□□□□ -0.79
CLIP1-203ENST00000361654 GYPBP06028 91 aa10.13□□□□□ -0.79
CLIP1-203ENST00000361654 IL13RA1P78552 427 aa10.13□□□□□ -0.79
CLIP1-203ENST00000361654 PIGFQ07326 219 aa10.13□□□□□ -0.79
CLIP1-203ENST00000361654 SPEM2Q0P670 501 aa10.13□□□□□ -0.79
CLIP1-203ENST00000361654 ZNF529Q6P280 563 aa10.13□□□□□ -0.79
CLIP1-203ENST00000361654 LYPD8Q6UX82 237 aa10.13□□□□□ -0.79
CLIP1-203ENST00000361654 TMEM64Q6YI46 380 aa10.13□□□□□ -0.79
CLIP1-203ENST00000361654 YRDCQ86U90 279 aaKnown RBP10.13□□□□□ -0.79
CLIP1-203ENST00000361654 C12orf45Q8N5I9 185 aaPredicted RBP10.13□□□□□ -0.79
CLIP1-203ENST00000361654 OR13C9Q8NGT0 318 aa10.13□□□□□ -0.79
CLIP1-203ENST00000361654 BRIX1Q8TDN6 353 aaKnown RBP10.13□□□□□ -0.79
CLIP1-203ENST00000361654 BCL7BQ9BQE9 202 aa10.13□□□□□ -0.79
CLIP1-203ENST00000361654 SPACA1Q9HBV2 294 aa10.13□□□□□ -0.79
CLIP1-203ENST00000361654 CRLF2Q9HC73 371 aa10.13□□□□□ -0.79
CLIP1-203ENST00000361654 CNOT11Q9UKZ1 510 aaKnown RBP10.13□□□□□ -0.79
CLIP1-203ENST00000361654 MSTNO14793 375 aa10.13□□□□□ -0.79
CLIP1-203ENST00000361654 PRICKLE3O43900 615 aaPredicted RBP10.13□□□□□ -0.79
CLIP1-203ENST00000361654 UBCP0CG48 685 aaKnown RBP10.13□□□□□ -0.79
CLIP1-203ENST00000361654 ETV4P43268 484 aa10.13□□□□□ -0.79
CLIP1-203ENST00000361654 EMP3P54852 163 aa10.13□□□□□ -0.79
CLIP1-203ENST00000361654 HBG1P69891 147 aa10.13□□□□□ -0.79
CLIP1-203ENST00000361654 HBG2P69892 147 aa10.13□□□□□ -0.79
CLIP1-203ENST00000361654 RELAQ04206 551 aa10.13□□□□□ -0.79
CLIP1-203ENST00000361654 C1orf140Q5VVS0 124 aa10.13□□□□□ -0.79
CLIP1-203ENST00000361654 RNLSQ5VYX0 342 aa10.13□□□□□ -0.79
CLIP1-203ENST00000361654 TMPRSS7Q7RTY8 843 aa10.13□□□□□ -0.79
CLIP1-203ENST00000361654 NAA40Q86UY6 237 aa10.13□□□□□ -0.79
CLIP1-203ENST00000361654 ETFBKMTQ8IXQ9 262 aa10.13□□□□□ -0.79
CLIP1-203ENST00000361654 MORN4Q8NDC4 146 aa10.13□□□□□ -0.79
CLIP1-203ENST00000361654 KHSRPQ92945 711 aaKnown RBP eCLIP10.13□□□□□ -0.792e-6■■■■□ 20.7
CLIP1-203ENST00000361654 EMG1Q92979 244 aaKnown RBP10.13□□□□□ -0.79
CLIP1-203ENST00000361654 KCNJ15Q99712 375 aa10.13□□□□□ -0.79
CLIP1-203ENST00000361654 PPA2Q9H2U2 334 aa10.13□□□□□ -0.79
CLIP1-203ENST00000361654 RPH3ALQ9UNE2 315 aa10.13□□□□□ -0.79
CLIP1-203ENST00000361654 ATG4BQ9Y4P1 393 aa10.13□□□□□ -0.79
CLIP1-203ENST00000361654 F2RP25116 425 aa10.12□□□□□ -0.79
CLIP1-203ENST00000361654 RAB5BP61020 215 aa10.12□□□□□ -0.79
CLIP1-203ENST00000361654 SIX1Q15475 284 aaPredicted RBP10.12□□□□□ -0.79
CLIP1-203ENST00000361654 HEPHL1Q6MZM0 1159 aa10.12□□□□□ -0.79
CLIP1-203ENST00000361654 CREB3L2Q70SY1 520 aa10.12□□□□□ -0.79
CLIP1-203ENST00000361654 CPEB2Q7Z5Q1 589 aaKnown RBP10.12□□□□□ -0.79
CLIP1-203ENST00000361654 TMEM246Q9BRR3 403 aa10.12□□□□□ -0.79
CLIP1-203ENST00000361654 CXXC1Q9P0U4 656 aaPredicted RBP10.12□□□□□ -0.79
CLIP1-203ENST00000361654 ZNF346Q9UL40 294 aaKnown RBP10.12□□□□□ -0.79
CLIP1-203ENST00000361654 A0A1W2PS29 197 aa10.12□□□□□ -0.79
CLIP1-203ENST00000361654 G3V2L1 256 aa10.12□□□□□ -0.79
CLIP1-203ENST00000361654 DEGS1O15121 323 aa10.12□□□□□ -0.79
CLIP1-203ENST00000361654 BMXP51813 675 aa10.12□□□□□ -0.79
CLIP1-203ENST00000361654 CLDN6P56747 220 aa10.12□□□□□ -0.79
CLIP1-203ENST00000361654 MARCH3Q86UD3 253 aa10.12□□□□□ -0.79
CLIP1-203ENST00000361654 LMNTD1Q8N9Z9 388 aa10.12□□□□□ -0.79
CLIP1-203ENST00000361654 SIMC1Q8NDZ2 872 aa10.12□□□□□ -0.79
CLIP1-203ENST00000361654 OR2T27Q8NH04 317 aa10.12□□□□□ -0.79
CLIP1-203ENST00000361654 ARL11Q969Q4 196 aa10.12□□□□□ -0.79
CLIP1-203ENST00000361654 KIRREL1Q96J84 757 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms