RNA–Protein interactions for RNA: ENST00000361371.9

LTN1-201, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LTN1, Length 7,685 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-201ENST00000361371 BPHLQ86WA6 291 aaPredicted RBP2.57□□□□□ -2
LTN1-201ENST00000361371 CMIPQ8IY22 773 aa2.57□□□□□ -2
LTN1-201ENST00000361371 GALNT16Q8N428 558 aa2.57□□□□□ -2
LTN1-201ENST00000361371 OR5L2Q8NGL0 311 aa2.57□□□□□ -2
LTN1-201ENST00000361371 ASB15Q8WXK1 588 aa2.57□□□□□ -2
LTN1-201ENST00000361371 SLC7A6Q92536 515 aa2.57□□□□□ -2
LTN1-201ENST00000361371 SRXN1Q9BYN0 137 aa2.57□□□□□ -2
LTN1-201ENST00000361371 HPF1Q9NWY4 346 aa2.57□□□□□ -2
LTN1-201ENST00000361371 NXT1Q9UKK6 140 aaKnown RBP2.57□□□□□ -2
LTN1-201ENST00000361371 RALYQ9UKM9 306 aaKnown RBP2.57□□□□□ -2
LTN1-201ENST00000361371 SF3B6Q9Y3B4 125 aaKnown RBP2.57□□□□□ -2
LTN1-201ENST00000361371 SPIN1Q9Y657 262 aaPredicted RBP2.57□□□□□ -2
LTN1-201ENST00000361371 LAMA5O15230 3695 aa2.57□□□□□ -2
LTN1-201ENST00000361371 TNFSF12-TNFSF13A0A0A6YY99 330 aa2.56□□□□□ -2
LTN1-201ENST00000361371 LOC100506127A0A0U1RQW1 187 aa2.56□□□□□ -2
LTN1-201ENST00000361371 A0A1W2PQ72 361 aa2.56□□□□□ -2
LTN1-201ENST00000361371 CCDC182A6NF36 153 aa2.56□□□□□ -2
LTN1-201ENST00000361371 PRR23D1E9PI22 279 aaPredicted RBP2.56□□□□□ -2
LTN1-201ENST00000361371 CTDSP2O14595 271 aa2.56□□□□□ -2
LTN1-201ENST00000361371 ARPC3O15145 178 aa2.56□□□□□ -2
LTN1-201ENST00000361371 SLC16A7O60669 478 aa2.56□□□□□ -2
LTN1-201ENST00000361371 PRR23D2P0DMB1 279 aaPredicted RBP2.56□□□□□ -2
LTN1-201ENST00000361371 OR8G3PP0DMU2 310 aa2.56□□□□□ -2
LTN1-201ENST00000361371 CELP19835 753 aa2.56□□□□□ -2
LTN1-201ENST00000361371 GSTM3P21266 225 aa2.56□□□□□ -2
LTN1-201ENST00000361371 CDAP32320 146 aa2.56□□□□□ -2
LTN1-201ENST00000361371 MAGEA5P43359 124 aa2.56□□□□□ -2
LTN1-201ENST00000361371 ENTPD1P49961 510 aa2.56□□□□□ -2
LTN1-201ENST00000361371 PSMD4P55036 377 aaKnown RBP2.56□□□□□ -2
LTN1-201ENST00000361371 SNRPGP62308 76 aaKnown RBP2.56□□□□□ -2
LTN1-201ENST00000361371 MYBPHQ13203 477 aa2.56□□□□□ -2
LTN1-201ENST00000361371 SSPNQ14714 243 aa2.56□□□□□ -2
LTN1-201ENST00000361371 DEFB109BQ30KR1 87 aa2.56□□□□□ -2
LTN1-201ENST00000361371 CARD17Q5XLA6 110 aa2.56□□□□□ -2
LTN1-201ENST00000361371 RTL4Q6ZR62 310 aa2.56□□□□□ -2
LTN1-201ENST00000361371 KLBQ86Z14 1044 aa2.56□□□□□ -2
LTN1-201ENST00000361371 EXD3Q8N9H8 876 aa2.56□□□□□ -2
LTN1-201ENST00000361371 ZIC4Q8N9L1 334 aa2.56□□□□□ -2
LTN1-201ENST00000361371 C1GALT1C1Q96EU7 318 aa2.56□□□□□ -2
LTN1-201ENST00000361371 RNFT2Q96EX2 444 aa2.56□□□□□ -2
LTN1-201ENST00000361371 PLEKHA8Q96JA3 519 aa2.56□□□□□ -2
LTN1-201ENST00000361371 HDHD5Q9BXW7 423 aa2.56□□□□□ -2
LTN1-201ENST00000361371 NMNAT2Q9BZQ4 307 aa2.56□□□□□ -2
LTN1-201ENST00000361371 POLR2J2Q9GZM3 115 aaKnown RBP2.56□□□□□ -2
LTN1-201ENST00000361371 DEFB127Q9H1M4 99 aa2.56□□□□□ -2
LTN1-201ENST00000361371 SCN3BQ9NY72 215 aa2.56□□□□□ -2
LTN1-201ENST00000361371 WASF3Q9UPY6 502 aa2.56□□□□□ -2
LTN1-201ENST00000361371 TPRKBQ9Y3C4 175 aa2.56□□□□□ -2
LTN1-201ENST00000361371 SNX5Q9Y5X3 404 aa2.56□□□□□ -2
LTN1-201ENST00000361371 A0A1B0GVC2 190 aa2.56□□□□□ -2
LTN1-201ENST00000361371 A6NIN4 97 aa2.56□□□□□ -2
LTN1-201ENST00000361371 A8MVM7 634 aa2.56□□□□□ -2
LTN1-201ENST00000361371 SMAD9O15198 467 aaKnown RBP2.56□□□□□ -2
LTN1-201ENST00000361371 PRODHO43272 600 aa2.56□□□□□ -2
LTN1-201ENST00000361371 TRAF3IP2O43734 574 aaPredicted RBP2.56□□□□□ -2
LTN1-201ENST00000361371 SLC25A12O75746 678 aa2.56□□□□□ -2
LTN1-201ENST00000361371 DXOO77932 396 aaKnown RBP2.56□□□□□ -2
LTN1-201ENST00000361371 AQP8O94778 261 aa2.56□□□□□ -2
LTN1-201ENST00000361371 SBK2P0C263 348 aa2.56□□□□□ -2
LTN1-201ENST00000361371 CSRP1P21291 193 aaKnown RBP2.56□□□□□ -2
LTN1-201ENST00000361371 ACVR1BP36896 505 aa2.56□□□□□ -2
LTN1-201ENST00000361371 SSR4P51571 173 aa2.56□□□□□ -2
LTN1-201ENST00000361371 CXCR4P61073 352 aa2.56□□□□□ -2
LTN1-201ENST00000361371 NFATC3Q12968 1075 aa2.56□□□□□ -2
LTN1-201ENST00000361371 KRR1Q13601 381 aaKnown RBP2.56□□□□□ -2
LTN1-201ENST00000361371 SPHARQ15513 63 aa2.56□□□□□ -2
LTN1-201ENST00000361371 PRSS48Q7RTY5 328 aa2.56□□□□□ -2
LTN1-201ENST00000361371 DPY19L4Q7Z388 723 aa2.56□□□□□ -2
LTN1-201ENST00000361371 GRINAQ7Z429 371 aa2.56□□□□□ -2
LTN1-201ENST00000361371 NANOGNBQ7Z5D8 188 aa2.56□□□□□ -2
LTN1-201ENST00000361371 LINC00346Q8IVM7 164 aa2.56□□□□□ -2
LTN1-201ENST00000361371 PHC2Q8IXK0 858 aa2.56□□□□□ -2
LTN1-201ENST00000361371 CDK20Q8IZL9 346 aa2.56□□□□□ -2
LTN1-201ENST00000361371 NANOGP1Q8N7R0 232 aa2.56□□□□□ -2
LTN1-201ENST00000361371 OR4K17Q8NGC6 315 aa2.56□□□□□ -2
LTN1-201ENST00000361371 OR6K6Q8NGW6 343 aa2.56□□□□□ -2
LTN1-201ENST00000361371 OR5J2Q8NH18 312 aa2.56□□□□□ -2
LTN1-201ENST00000361371 OR8K3Q8NH51 312 aa2.56□□□□□ -2
LTN1-201ENST00000361371 DNAJA4Q8WW22 397 aaPredicted RBP2.56□□□□□ -2
LTN1-201ENST00000361371 SPRYD4Q8WW59 207 aaPredicted RBP2.56□□□□□ -2
LTN1-201ENST00000361371 TTC9Q92623 222 aa2.56□□□□□ -2
LTN1-201ENST00000361371 PMM1Q92871 262 aa2.56□□□□□ -2
LTN1-201ENST00000361371 TMCO6Q96DC7 493 aa2.56□□□□□ -2
LTN1-201ENST00000361371 Q96MT0 163 aa2.56□□□□□ -2
LTN1-201ENST00000361371 MFRPQ9BY79 579 aa2.56□□□□□ -2
LTN1-201ENST00000361371 FKRPQ9H9S5 495 aa2.56□□□□□ -2
LTN1-201ENST00000361371 EXOSC3Q9NQT5 275 aaKnown RBP2.56□□□□□ -2
LTN1-201ENST00000361371 DIMT1Q9UNQ2 313 aaKnown RBP2.56□□□□□ -2
LTN1-201ENST00000361371 PCDHGB1Q9Y5G3 927 aa2.56□□□□□ -2
LTN1-201ENST00000361371 A0A1W2PQL4 384 aaPredicted RBP2.56□□□□□ -2
LTN1-201ENST00000361371 C3orf80F5H4A9 247 aa2.56□□□□□ -2
LTN1-201ENST00000361371 STMND1H3BQB6 276 aa2.56□□□□□ -2
LTN1-201ENST00000361371 TRMUO75648 421 aaKnown RBP2.56□□□□□ -2
LTN1-201ENST00000361371 AHSA1O95433 338 aa2.56□□□□□ -2
LTN1-201ENST00000361371 IFNA8P32881 189 aa2.56□□□□□ -2
LTN1-201ENST00000361371 RGS6P49758 472 aa2.56□□□□□ -2
LTN1-201ENST00000361371 AGFG1P52594 562 aaKnown RBP2.56□□□□□ -2
LTN1-201ENST00000361371 NANOS3P60323 173 aaKnown RBP2.56□□□□□ -2
LTN1-201ENST00000361371 IFITM3Q01628 133 aa2.56□□□□□ -2
LTN1-201ENST00000361371 KHDRBS1Q07666 443 aaKnown RBP eCLIP2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms