RNA–Protein interactions for RNA: ENST00000359544.2

UBAP1-202, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-202ENST00000359544 RPE65Q16518 533 aa13.67□□□□□ -0.22
UBAP1-202ENST00000359544 FAM46CQ5VWP2 391 aa13.67□□□□□ -0.22
UBAP1-202ENST00000359544 SNX33Q8WV41 574 aa13.67□□□□□ -0.22
UBAP1-202ENST00000359544 SLC25A28Q96A46 364 aa13.67□□□□□ -0.22
UBAP1-202ENST00000359544 LRRC3BQ96PB8 259 aa13.67□□□□□ -0.22
UBAP1-202ENST00000359544 IL17FQ96PD4 163 aa13.67□□□□□ -0.22
UBAP1-202ENST00000359544 ASF1BQ9NVP2 202 aa13.67□□□□□ -0.22
UBAP1-202ENST00000359544 UPB1Q9UBR1 384 aa13.67□□□□□ -0.22
UBAP1-202ENST00000359544 CCL26Q9Y258 94 aa13.67□□□□□ -0.22
UBAP1-202ENST00000359544 ACOD1A6NK06 481 aa13.67□□□□□ -0.22
UBAP1-202ENST00000359544 PMS2P2O95744 297 aa13.67□□□□□ -0.22
UBAP1-202ENST00000359544 PDGFBP01127 241 aaPredicted RBP13.67□□□□□ -0.22
UBAP1-202ENST00000359544 IFNGP01579 166 aa13.67□□□□□ -0.22
UBAP1-202ENST00000359544 CLUP10909 449 aa13.67□□□□□ -0.22
UBAP1-202ENST00000359544 ADCYAP1P18509 176 aa13.67□□□□□ -0.22
UBAP1-202ENST00000359544 REEP5Q00765 189 aa13.67□□□□□ -0.22
UBAP1-202ENST00000359544 EIPR1Q53HC9 387 aa13.67□□□□□ -0.22
UBAP1-202ENST00000359544 LIN54Q6MZP7 749 aa13.67□□□□□ -0.22
UBAP1-202ENST00000359544 C2orf73Q8N5S3 287 aaPredicted RBP13.67□□□□□ -0.22
UBAP1-202ENST00000359544 ARL14EPQ8N8R7 260 aaPredicted RBP13.67□□□□□ -0.22
UBAP1-202ENST00000359544 POMGNT2Q8NAT1 580 aa13.67□□□□□ -0.22
UBAP1-202ENST00000359544 TMEM239Q8WW34 195 aa13.67□□□□□ -0.22
UBAP1-202ENST00000359544 RAD51AP1Q96B01 352 aa13.67□□□□□ -0.22
UBAP1-202ENST00000359544 VRK1Q99986 396 aaPredicted RBP13.67□□□□□ -0.22
UBAP1-202ENST00000359544 TTTY10Q9BZA0 68 aa13.67□□□□□ -0.22
UBAP1-202ENST00000359544 SLITRK2Q9H156 845 aa13.67□□□□□ -0.22
UBAP1-202ENST00000359544 EXO5Q9H790 373 aa13.67□□□□□ -0.22
UBAP1-202ENST00000359544 TAC3Q9UHF0 121 aa13.67□□□□□ -0.22
UBAP1-202ENST00000359544 MKL2Q9ULH7 1088 aa13.67□□□□□ -0.22
UBAP1-202ENST00000359544 TNFSF18Q9UNG2 199 aa13.67□□□□□ -0.22
UBAP1-202ENST00000359544 PIN1P1O15428 100 aa13.66□□□□□ -0.22
UBAP1-202ENST00000359544 SLC25A4P12235 298 aa13.66□□□□□ -0.22
UBAP1-202ENST00000359544 FUT1P19526 365 aa13.66□□□□□ -0.22
UBAP1-202ENST00000359544 HCCSP53701 268 aa13.66□□□□□ -0.22
UBAP1-202ENST00000359544 CLDN12P56749 244 aa13.66□□□□□ -0.22
UBAP1-202ENST00000359544 AGERQ15109 404 aa13.66□□□□□ -0.22
UBAP1-202ENST00000359544 C9orf64Q5T6V5 341 aa13.66□□□□□ -0.22
UBAP1-202ENST00000359544 RAB12Q6IQ22 244 aa13.66□□□□□ -0.22
UBAP1-202ENST00000359544 H3F3CQ6NXT2 135 aa13.66□□□□□ -0.22
UBAP1-202ENST00000359544 Q6ZVU0 165 aa13.66□□□□□ -0.22
UBAP1-202ENST00000359544 RTL10Q7L3V2 364 aa13.66□□□□□ -0.22
UBAP1-202ENST00000359544 TRAPPC5Q8IUR0 188 aa13.66□□□□□ -0.22
UBAP1-202ENST00000359544 NUP43Q8NFH3 380 aa13.66□□□□□ -0.22
UBAP1-202ENST00000359544 OR1J4Q8NGS1 313 aa13.66□□□□□ -0.22
UBAP1-202ENST00000359544 RXFP4Q8TDU9 374 aa13.66□□□□□ -0.22
UBAP1-202ENST00000359544 INTS12Q96CB8 462 aaKnown RBP13.66□□□□□ -0.22
UBAP1-202ENST00000359544 CNN2Q99439 309 aaKnown RBP13.66□□□□□ -0.22
UBAP1-202ENST00000359544 PDCD1LG2Q9BQ51 273 aa13.66□□□□□ -0.22
UBAP1-202ENST00000359544 PRSS27Q9BQR3 290 aa13.66□□□□□ -0.22
UBAP1-202ENST00000359544 TCEAL7Q9BRU2 100 aa13.66□□□□□ -0.22
UBAP1-202ENST00000359544 COMMD9Q9P000 198 aa13.66□□□□□ -0.22
UBAP1-202ENST00000359544 GNG8Q9UK08 70 aa13.66□□□□□ -0.22
UBAP1-202ENST00000359544 OR10H1Q9Y4A9 318 aa13.66□□□□□ -0.22
UBAP1-202ENST00000359544 TP53BP1Q12888 1972 aaPredicted RBP13.66□□□□□ -0.22
UBAP1-202ENST00000359544 WASH3PC4AMC7 463 aa13.66□□□□□ -0.22
UBAP1-202ENST00000359544 EIF1BO60739 113 aaKnown RBP13.66□□□□□ -0.22
UBAP1-202ENST00000359544 SLC25A12O75746 678 aa13.66□□□□□ -0.22
UBAP1-202ENST00000359544 POU2F2P09086 479 aa13.66□□□□□ -0.22
UBAP1-202ENST00000359544 AKAIN1P0CW23 69 aa13.66□□□□□ -0.22
UBAP1-202ENST00000359544 FCARP24071 287 aa13.66□□□□□ -0.22
UBAP1-202ENST00000359544 EIF1P41567 113 aaKnown RBP13.66□□□□□ -0.22
UBAP1-202ENST00000359544 PDZK1IP1Q13113 114 aa13.66□□□□□ -0.22
UBAP1-202ENST00000359544 LPCAT3Q6P1A2 487 aa13.66□□□□□ -0.22
UBAP1-202ENST00000359544 THSD4Q6ZMP0 1018 aa13.66□□□□□ -0.22
UBAP1-202ENST00000359544 UBE3DQ7Z6J8 389 aa13.66□□□□□ -0.22
UBAP1-202ENST00000359544 CCDC116Q8IYX3 515 aa13.66□□□□□ -0.22
UBAP1-202ENST00000359544 RFLNBQ8N5W9 214 aa13.66□□□□□ -0.22
UBAP1-202ENST00000359544 PFN4Q8NHR9 129 aa13.66□□□□□ -0.22
UBAP1-202ENST00000359544 C1orf198Q9H425 327 aa13.66□□□□□ -0.22
UBAP1-202ENST00000359544 DPEP2Q9H4A9 486 aa13.66□□□□□ -0.22
UBAP1-202ENST00000359544 FEZF1A0PJY2 475 aa13.65□□□□□ -0.22
UBAP1-202ENST00000359544 PTGER1P34995 402 aa13.65□□□□□ -0.22
UBAP1-202ENST00000359544 IRF4Q15306 451 aa13.65□□□□□ -0.22
UBAP1-202ENST00000359544 FCRLBQ6BAA4 426 aa13.65□□□□□ -0.22
UBAP1-202ENST00000359544 C11orf96Q7Z7L8 435 aa13.65□□□□□ -0.22
UBAP1-202ENST00000359544 BOLLQ8N9W6 283 aaKnown RBP13.65□□□□□ -0.22
UBAP1-202ENST00000359544 CYB561A3Q8NBI2 242 aa13.65□□□□□ -0.22
UBAP1-202ENST00000359544 STK35Q8TDR2 534 aa13.65□□□□□ -0.22
UBAP1-202ENST00000359544 DUSP19Q8WTR2 217 aa13.65□□□□□ -0.22
UBAP1-202ENST00000359544 ARL11Q969Q4 196 aa13.65□□□□□ -0.22
UBAP1-202ENST00000359544 ZNF75AQ96N20 296 aa13.65□□□□□ -0.22
UBAP1-202ENST00000359544 ASB16Q96NS5 453 aa13.65□□□□□ -0.22
UBAP1-202ENST00000359544 ADAT1Q9BUB4 502 aaKnown RBP13.65□□□□□ -0.22
UBAP1-202ENST00000359544 WDR13Q9H1Z4 485 aa13.65□□□□□ -0.22
UBAP1-202ENST00000359544 SLC22A11Q9NSA0 550 aa13.65□□□□□ -0.22
UBAP1-202ENST00000359544 ZNF281Q9Y2X9 895 aa13.65□□□□□ -0.22
UBAP1-202ENST00000359544 OR5H14A6NHG9 310 aa13.65□□□□□ -0.22
UBAP1-202ENST00000359544 XRCC3O43542 346 aa13.65□□□□□ -0.22
UBAP1-202ENST00000359544 RDH16O75452 317 aa13.65□□□□□ -0.22
UBAP1-202ENST00000359544 FOLR2P14207 255 aa13.65□□□□□ -0.22
UBAP1-202ENST00000359544 SPI1P17947 270 aa13.65□□□□□ -0.22
UBAP1-202ENST00000359544 S100PP25815 95 aa13.65□□□□□ -0.22
UBAP1-202ENST00000359544 PTGFRP43088 359 aa13.65□□□□□ -0.22
UBAP1-202ENST00000359544 PDX1P52945 283 aa13.65□□□□□ -0.22
UBAP1-202ENST00000359544 ACOT7LQ6ZUV0 252 aa13.65□□□□□ -0.22
UBAP1-202ENST00000359544 TMPRSS11FQ6ZWK6 438 aa13.65□□□□□ -0.22
UBAP1-202ENST00000359544 SLC35F2Q8IXU6 374 aa13.65□□□□□ -0.22
UBAP1-202ENST00000359544 ZFP82Q8N141 532 aa13.65□□□□□ -0.22
UBAP1-202ENST00000359544 AMER3Q8N944 861 aa13.65□□□□□ -0.22
UBAP1-202ENST00000359544 OR13C2Q8NGS9 318 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms