RNA–Protein interactions for RNA: ENST00000359082.3

SHANK1-202, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 5 BASIC

Gene SHANK1, Length 6,459 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-202ENST00000359082 NAA50Q9GZZ1 169 aaKnown RBP17.04■□□□□ 0.32
SHANK1-202ENST00000359082 SGCEO43556 437 aa17.04■□□□□ 0.32
SHANK1-202ENST00000359082 BLVRBP30043 206 aaPredicted RBP17.04■□□□□ 0.32
SHANK1-202ENST00000359082 HLA-FP30511 346 aa17.04■□□□□ 0.32
SHANK1-202ENST00000359082 CARD18P57730 90 aa17.04■□□□□ 0.32
SHANK1-202ENST00000359082 FAM111BQ6SJ93 734 aa17.04■□□□□ 0.32
SHANK1-202ENST00000359082 INTS12Q96CB8 462 aaKnown RBP17.04■□□□□ 0.32
SHANK1-202ENST00000359082 NMNAT3Q96T66 252 aa17.04■□□□□ 0.32
SHANK1-202ENST00000359082 NUP188Q5SRE5 1749 aa17.04■□□□□ 0.32
SHANK1-202ENST00000359082 A0A0D9SG52 128 aa17.04■□□□□ 0.32
SHANK1-202ENST00000359082 SERINC4A6NH21 518 aa17.04■□□□□ 0.32
SHANK1-202ENST00000359082 DVL1O14640 695 aa17.04■□□□□ 0.32
SHANK1-202ENST00000359082 ANXA7P20073 488 aaKnown RBP17.04■□□□□ 0.32
SHANK1-202ENST00000359082 ENPP1P22413 925 aa17.04■□□□□ 0.32
SHANK1-202ENST00000359082 DVL1P1P54792 670 aaPredicted RBP17.04■□□□□ 0.32
SHANK1-202ENST00000359082 SLC7A9P82251 487 aa17.04■□□□□ 0.32
SHANK1-202ENST00000359082 LDLRAD1Q5T700 205 aa17.04■□□□□ 0.32
SHANK1-202ENST00000359082 C17orf99Q6UX52 265 aa17.04■□□□□ 0.32
SHANK1-202ENST00000359082 RFPL4BQ6ZWI9 263 aa17.04■□□□□ 0.32
SHANK1-202ENST00000359082 MBOAT2Q6ZWT7 520 aa17.04■□□□□ 0.32
SHANK1-202ENST00000359082 SVBPQ8N300 66 aa17.04■□□□□ 0.32
SHANK1-202ENST00000359082 TMED7-TICAM2A0A0A6YYA0 188 aa17.03■□□□□ 0.32
SHANK1-202ENST00000359082 HOXD11P31277 338 aaPredicted RBP17.03■□□□□ 0.32
SHANK1-202ENST00000359082 TMEM255BQ8WV15 326 aa17.03■□□□□ 0.32
SHANK1-202ENST00000359082 TMED7Q9Y3B3 224 aa17.03■□□□□ 0.32
SHANK1-202ENST00000359082 MYH6P13533 1939 aa17.03■□□□□ 0.32
SHANK1-202ENST00000359082 GDNFP39905 211 aa17.03■□□□□ 0.32
SHANK1-202ENST00000359082 SLC35A1P78382 337 aa17.03■□□□□ 0.32
SHANK1-202ENST00000359082 TLE4Q04727 773 aa17.03■□□□□ 0.32
SHANK1-202ENST00000359082 TBCEQ15813 527 aaPredicted RBP17.03■□□□□ 0.32
SHANK1-202ENST00000359082 TMEM64Q6YI46 380 aa17.03■□□□□ 0.32
SHANK1-202ENST00000359082 LACC1Q8IV20 430 aa17.03■□□□□ 0.32
SHANK1-202ENST00000359082 CLSTN3Q9BQT9 956 aa17.03■□□□□ 0.32
SHANK1-202ENST00000359082 ARNT2Q9HBZ2 717 aa17.03■□□□□ 0.32
SHANK1-202ENST00000359082 NGBQ9NPG2 151 aa17.03■□□□□ 0.32
SHANK1-202ENST00000359082 ARHGAP33O14559 1287 aa17.03■□□□□ 0.32
SHANK1-202ENST00000359082 NSA2O95478 260 aaKnown RBP17.03■□□□□ 0.32
SHANK1-202ENST00000359082 SNCAP37840 140 aa17.03■□□□□ 0.32
SHANK1-202ENST00000359082 DCDP81605 110 aaKnown RBP17.03■□□□□ 0.32
SHANK1-202ENST00000359082 OVCH1Q7RTY7 1134 aa17.03■□□□□ 0.32
SHANK1-202ENST00000359082 SYT9Q86SS6 491 aa17.03■□□□□ 0.32
SHANK1-202ENST00000359082 ATOH8Q96SQ7 321 aa17.03■□□□□ 0.32
SHANK1-202ENST00000359082 WDR76Q9H967 626 aa17.03■□□□□ 0.32
SHANK1-202ENST00000359082 CSO75390 466 aaKnown RBP17.03■□□□□ 0.32
SHANK1-202ENST00000359082 EDN1P05305 212 aa17.03■□□□□ 0.32
SHANK1-202ENST00000359082 IL34Q6ZMJ4 242 aa17.03■□□□□ 0.32
SHANK1-202ENST00000359082 Q6ZTK2 550 aa17.03■□□□□ 0.32
SHANK1-202ENST00000359082 MITD1Q8WV92 249 aa17.03■□□□□ 0.32
SHANK1-202ENST00000359082 ZNF891A8MT65 544 aaPredicted RBP17.03■□□□□ 0.32
SHANK1-202ENST00000359082 A8MVM7 634 aa17.03■□□□□ 0.32
SHANK1-202ENST00000359082 H3BNC9 293 aa17.03■□□□□ 0.32
SHANK1-202ENST00000359082 SMLR1H3BR10 107 aa17.03■□□□□ 0.32
SHANK1-202ENST00000359082 ZNF728P0DKX0 622 aa17.03■□□□□ 0.32
SHANK1-202ENST00000359082 MAKP20794 623 aa17.03■□□□□ 0.32
SHANK1-202ENST00000359082 SHC1P29353 583 aa17.03■□□□□ 0.32
SHANK1-202ENST00000359082 CLINT1Q14677 625 aa17.03■□□□□ 0.32
SHANK1-202ENST00000359082 PHF1O43189 567 aaPredicted RBP17.02■□□□□ 0.32
SHANK1-202ENST00000359082 ATXN1LP0C7T5 689 aaKnown RBP17.02■□□□□ 0.32
SHANK1-202ENST00000359082 P2RX1P51575 399 aa17.02■□□□□ 0.32
SHANK1-202ENST00000359082 EDDM3BP56851 147 aa17.02■□□□□ 0.32
SHANK1-202ENST00000359082 RAB11AP62491 216 aa17.02■□□□□ 0.32
SHANK1-202ENST00000359082 HES1Q14469 280 aa17.02■□□□□ 0.32
SHANK1-202ENST00000359082 RNF113BQ8IZP6 322 aaKnown RBP17.02■□□□□ 0.32
SHANK1-202ENST00000359082 SLC6A18Q96N87 628 aa17.02■□□□□ 0.32
SHANK1-202ENST00000359082 ACSS1Q9NUB1 689 aaPredicted RBP17.02■□□□□ 0.32
SHANK1-202ENST00000359082 PURGQ9UJV8 347 aaKnown RBP17.02■□□□□ 0.32
SHANK1-202ENST00000359082 ADAM23O75077 832 aa17.02■□□□□ 0.32
SHANK1-202ENST00000359082 NXPH2O95156 264 aa17.02■□□□□ 0.32
SHANK1-202ENST00000359082 OR10J4P0C629 311 aa17.02■□□□□ 0.32
SHANK1-202ENST00000359082 PRDX1Q06830 199 aaKnown RBP17.02■□□□□ 0.32
SHANK1-202ENST00000359082 ZNF750Q32MQ0 723 aa17.02■□□□□ 0.32
SHANK1-202ENST00000359082 CNTN4Q8IWV2 1026 aa17.02■□□□□ 0.32
SHANK1-202ENST00000359082 BATF2Q8N1L9 274 aa17.02■□□□□ 0.32
SHANK1-202ENST00000359082 SLC38A5Q8WUX1 472 aa17.02■□□□□ 0.32
SHANK1-202ENST00000359082 ZC3HAV1LQ96H79 300 aaKnown RBP17.02■□□□□ 0.32
SHANK1-202ENST00000359082 CPPED1Q9BRF8 314 aaPredicted RBP17.02■□□□□ 0.32
SHANK1-202ENST00000359082 M0QYG6 137 aa17.02■□□□□ 0.32
SHANK1-202ENST00000359082 BHLHE40O14503 412 aa17.02■□□□□ 0.32
SHANK1-202ENST00000359082 ICAM2P13598 275 aa17.02■□□□□ 0.32
SHANK1-202ENST00000359082 ADRA1AP35348 466 aa17.02■□□□□ 0.32
SHANK1-202ENST00000359082 CCL11P51671 97 aa17.02■□□□□ 0.32
SHANK1-202ENST00000359082 MED25Q71SY5 747 aa17.02■□□□□ 0.32
SHANK1-202ENST00000359082 FAM109AQ8N4B1 249 aa17.02■□□□□ 0.32
SHANK1-202ENST00000359082 OR5M1Q8NGP8 315 aa17.02■□□□□ 0.32
SHANK1-202ENST00000359082 AQP7O14520 342 aa17.02■□□□□ 0.32
SHANK1-202ENST00000359082 CSNK1EP49674 416 aaKnown RBP17.02■□□□□ 0.32
SHANK1-202ENST00000359082 RPL11P62913 178 aaKnown RBP17.02■□□□□ 0.32
SHANK1-202ENST00000359082 TESK1Q15569 626 aa17.02■□□□□ 0.32
SHANK1-202ENST00000359082 HBMQ6B0K9 141 aa17.02■□□□□ 0.32
SHANK1-202ENST00000359082 TANGO2Q6ICL3 276 aa17.02■□□□□ 0.32
SHANK1-202ENST00000359082 BCDIN3DQ7Z5W3 292 aaKnown RBP17.02■□□□□ 0.32
SHANK1-202ENST00000359082 ADGRF3Q8IZF5 1079 aa17.02■□□□□ 0.32
SHANK1-202ENST00000359082 OR1J2Q8NGS2 313 aa17.02■□□□□ 0.32
SHANK1-202ENST00000359082 LILRB4Q8NHJ6 448 aa17.02■□□□□ 0.32
SHANK1-202ENST00000359082 FCRL1Q96LA6 429 aa17.02■□□□□ 0.32
SHANK1-202ENST00000359082 SLC39A9Q9NUM3 307 aa17.02■□□□□ 0.32
SHANK1-202ENST00000359082 ANKRD10Q9NXR5 420 aa17.02■□□□□ 0.32
SHANK1-202ENST00000359082 MOKQ9UQ07 419 aa17.02■□□□□ 0.32
SHANK1-202ENST00000359082 NKX6-3A6NJ46 265 aa17.02■□□□□ 0.31
SHANK1-202ENST00000359082 DEFA4P12838 97 aa17.02■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms