RNA–Protein interactions for RNA: ENST00000359060.5

SSU72-202, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2 BASIC

Gene SSU72, Length 4,176 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-202ENST00000359060 GPER1Q99527 375 aa10.22□□□□□ -0.77
SSU72-202ENST00000359060 NPAP1Q9NZP6 1156 aa10.22□□□□□ -0.77
SSU72-202ENST00000359060 NPFFR2Q9Y5X5 522 aa10.22□□□□□ -0.77
SSU72-202ENST00000359060 DCDC2BA2VCK2 349 aa10.22□□□□□ -0.77
SSU72-202ENST00000359060 BLACEA4D250 179 aa10.22□□□□□ -0.77
SSU72-202ENST00000359060 FOXS1O43638 330 aa10.22□□□□□ -0.77
SSU72-202ENST00000359060 GATBO75879 557 aaKnown RBP10.22□□□□□ -0.77
SSU72-202ENST00000359060 DNASE1P24855 282 aa10.22□□□□□ -0.77
SSU72-202ENST00000359060 HTR2BP41595 481 aa10.22□□□□□ -0.77
SSU72-202ENST00000359060 PPICP45877 212 aa10.22□□□□□ -0.77
SSU72-202ENST00000359060 RRAS2P62070 204 aaPredicted RBP10.22□□□□□ -0.77
SSU72-202ENST00000359060 RPL18Q07020 188 aaKnown RBP10.22□□□□□ -0.77
SSU72-202ENST00000359060 FCN2Q15485 313 aa10.22□□□□□ -0.77
SSU72-202ENST00000359060 SLC6A19Q695T7 634 aa10.22□□□□□ -0.77
SSU72-202ENST00000359060 TMPRSS9Q7Z410 1059 aa10.22□□□□□ -0.77
SSU72-202ENST00000359060 SMRP1Q8NCR6 262 aa10.22□□□□□ -0.77
SSU72-202ENST00000359060 OMA1Q96E52 524 aa10.22□□□□□ -0.77
SSU72-202ENST00000359060 ZNF578Q96N58 590 aaPredicted RBP10.22□□□□□ -0.77
SSU72-202ENST00000359060 SDHCQ99643 169 aaPredicted RBP10.22□□□□□ -0.77
SSU72-202ENST00000359060 ATG5Q9H1Y0 275 aa10.22□□□□□ -0.77
SSU72-202ENST00000359060 OR51J1Q9H342 316 aa10.22□□□□□ -0.77
SSU72-202ENST00000359060 B3GAT2Q9NPZ5 323 aa10.22□□□□□ -0.77
SSU72-202ENST00000359060 SDHAF3Q9NRP4 125 aa10.22□□□□□ -0.77
SSU72-202ENST00000359060 KLHL9Q9P2J3 617 aa10.22□□□□□ -0.77
SSU72-202ENST00000359060 DHDHQ9UQ10 334 aa10.22□□□□□ -0.77
SSU72-202ENST00000359060 SLC6A5Q9Y345 797 aa10.22□□□□□ -0.77
SSU72-202ENST00000359060 MN1Q10571 1320 aaPredicted RBP10.22□□□□□ -0.77
SSU72-202ENST00000359060 SDK2Q58EX2 2172 aa10.22□□□□□ -0.77
SSU72-202ENST00000359060 HELZP42694 1942 aaKnown RBP10.22□□□□□ -0.77
SSU72-202ENST00000359060 TRAV18A0A075B6X5 111 aa10.22□□□□□ -0.77
SSU72-202ENST00000359060 A6NCN8 305 aa10.22□□□□□ -0.77
SSU72-202ENST00000359060 IMPA2O14732 288 aa10.22□□□□□ -0.77
SSU72-202ENST00000359060 SRFP11831 508 aa10.22□□□□□ -0.77
SSU72-202ENST00000359060 DDOSTP39656 456 aa10.22□□□□□ -0.77
SSU72-202ENST00000359060 GDNFP39905 211 aa10.22□□□□□ -0.77
SSU72-202ENST00000359060 RIDAP52758 137 aaKnown RBP10.22□□□□□ -0.77
SSU72-202ENST00000359060 OR7A5Q15622 319 aa10.22□□□□□ -0.77
SSU72-202ENST00000359060 CEBPEQ15744 281 aa10.22□□□□□ -0.77
SSU72-202ENST00000359060 C4orf46Q504U0 113 aa10.22□□□□□ -0.77
SSU72-202ENST00000359060 CARD17Q5XLA6 110 aa10.22□□□□□ -0.77
SSU72-202ENST00000359060 SLC18B1Q6NT16 456 aa10.22□□□□□ -0.77
SSU72-202ENST00000359060 DNM1P34Q6PK57 102 aa10.22□□□□□ -0.77
SSU72-202ENST00000359060 NPSR1Q6W5P4 371 aa10.22□□□□□ -0.77
SSU72-202ENST00000359060 CHRDL2Q6WN34 429 aa10.22□□□□□ -0.77
SSU72-202ENST00000359060 SYT13Q7L8C5 426 aa10.22□□□□□ -0.77
SSU72-202ENST00000359060 TMED4Q7Z7H5 227 aa10.22□□□□□ -0.77
SSU72-202ENST00000359060 TDHQ8IZJ6 230 aa10.22□□□□□ -0.77
SSU72-202ENST00000359060 OR4K17Q8NGC6 315 aa10.22□□□□□ -0.77
SSU72-202ENST00000359060 LPAR4Q99677 370 aa10.22□□□□□ -0.77
SSU72-202ENST00000359060 CMKLR1Q99788 373 aa10.22□□□□□ -0.77
SSU72-202ENST00000359060 OR11A1Q9GZK7 315 aa10.22□□□□□ -0.77
SSU72-202ENST00000359060 MGAT4AQ9UM21 535 aa10.22□□□□□ -0.77
SSU72-202ENST00000359060 SLCO1B1Q9Y6L6 691 aa10.22□□□□□ -0.77
SSU72-202ENST00000359060 CACNA1EQ15878 2313 aa10.22□□□□□ -0.77
SSU72-202ENST00000359060 ZNF593O00488 134 aaPredicted RBP10.22□□□□□ -0.77
SSU72-202ENST00000359060 PLA2G10O15496 165 aa10.22□□□□□ -0.77
SSU72-202ENST00000359060 SUSD5O60279 629 aa10.22□□□□□ -0.77
SSU72-202ENST00000359060 TBXA2RP21731 343 aa10.22□□□□□ -0.77
SSU72-202ENST00000359060 ZNF41P51814 821 aaPredicted RBP10.22□□□□□ -0.77
SSU72-202ENST00000359060 ZNF85Q03923 595 aa10.22□□□□□ -0.77
SSU72-202ENST00000359060 C19orf48Q6RUI8 117 aa10.22□□□□□ -0.77
SSU72-202ENST00000359060 ZNF321PQ8N8H1 164 aa10.22□□□□□ -0.77
SSU72-202ENST00000359060 ADAMTS14Q8WXS8 1223 aa10.22□□□□□ -0.77
SSU72-202ENST00000359060 RBP7Q96R05 134 aa10.22□□□□□ -0.77
SSU72-202ENST00000359060 PHF7Q9BWX1 381 aaPredicted RBP10.22□□□□□ -0.77
SSU72-202ENST00000359060 SF3B6Q9Y3B4 125 aaKnown RBP10.22□□□□□ -0.77
SSU72-202ENST00000359060 MED12Q93074 2177 aa10.22□□□□□ -0.77
SSU72-202ENST00000359060 LRRK1Q38SD2 2015 aa10.21□□□□□ -0.77
SSU72-202ENST00000359060 METTL12A8MUP2 240 aa10.21□□□□□ -0.77
SSU72-202ENST00000359060 FAM25EA8MYX2 175 aa10.21□□□□□ -0.77
SSU72-202ENST00000359060 UBL3O95164 117 aa10.21□□□□□ -0.77
SSU72-202ENST00000359060 CT45A8P0DMV1 189 aa10.21□□□□□ -0.77
SSU72-202ENST00000359060 CT45A9P0DMV2 189 aa10.21□□□□□ -0.77
SSU72-202ENST00000359060 GTF2F2P13984 249 aa10.21□□□□□ -0.77
SSU72-202ENST00000359060 ATF1P18846 271 aa10.21□□□□□ -0.77
SSU72-202ENST00000359060 ACAA2P42765 397 aaKnown RBP10.21□□□□□ -0.77
SSU72-202ENST00000359060 CBFBQ13951 182 aa10.21□□□□□ -0.77
SSU72-202ENST00000359060 CD226Q15762 336 aa10.21□□□□□ -0.77
SSU72-202ENST00000359060 GLYR1Q49A26 553 aaPredicted RBP10.21□□□□□ -0.77
SSU72-202ENST00000359060 CT45A2Q5DJT8 189 aa10.21□□□□□ -0.77
SSU72-202ENST00000359060 SLC22A10Q63ZE4 541 aa10.21□□□□□ -0.77
SSU72-202ENST00000359060 KTI12Q96EK9 354 aaPredicted RBP10.21□□□□□ -0.77
SSU72-202ENST00000359060 MOGAT1Q96PD6 335 aa10.21□□□□□ -0.77
SSU72-202ENST00000359060 PDCD10Q9BUL8 212 aa10.21□□□□□ -0.77
SSU72-202ENST00000359060 PPIL3Q9H2H8 161 aaKnown RBP10.21□□□□□ -0.77
SSU72-202ENST00000359060 LIN7BQ9HAP6 207 aa10.21□□□□□ -0.77
SSU72-202ENST00000359060 SERINC1Q9NRX5 453 aa10.21□□□□□ -0.77
SSU72-202ENST00000359060 PPP4R1LQ9P1A2 415 aa10.21□□□□□ -0.77
SSU72-202ENST00000359060 ZNF223Q9UK11 482 aaPredicted RBP10.21□□□□□ -0.77
SSU72-202ENST00000359060 IGHV1OR15-9A0A0B4J2B8 117 aa10.21□□□□□ -0.78
SSU72-202ENST00000359060 A0A1W2PPL8 197 aa10.21□□□□□ -0.78
SSU72-202ENST00000359060 TMEM221A6NGB7 291 aa10.21□□□□□ -0.78
SSU72-202ENST00000359060 SLC43A1O75387 559 aa10.21□□□□□ -0.78
SSU72-202ENST00000359060 TCRBP04435 133 aa10.21□□□□□ -0.78
SSU72-202ENST00000359060 NME1P15531 152 aaKnown RBP10.21□□□□□ -0.78
SSU72-202ENST00000359060 NPR2P20594 1047 aa10.21□□□□□ -0.78
SSU72-202ENST00000359060 TLE3Q04726 772 aa10.21□□□□□ -0.78
SSU72-202ENST00000359060 EIF2B1Q14232 305 aaKnown RBP10.21□□□□□ -0.78
SSU72-202ENST00000359060 ELAVL1Q15717 326 aaKnown RBP10.21□□□□□ -0.78
SSU72-202ENST00000359060 SCGB2B2Q4G0G5 96 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms