RNA–Protein interactions for RNA: ENST00000357235.5

CDC42SE1-201, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE1, Length 3,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-201ENST00000357235 CMTM4Q8IZR5 234 aa7.57□□□□□ -1.2
CDC42SE1-201ENST00000357235 AKR7LQ8NHP1 331 aa7.57□□□□□ -1.2
CDC42SE1-201ENST00000357235 SUSD6Q92537 303 aa7.57□□□□□ -1.2
CDC42SE1-201ENST00000357235 TNFRSF13CQ96RJ3 184 aa7.57□□□□□ -1.2
CDC42SE1-201ENST00000357235 ALX4Q9H161 411 aaPredicted RBP7.57□□□□□ -1.2
CDC42SE1-201ENST00000357235 SLC25A32Q9H2D1 315 aa7.57□□□□□ -1.2
CDC42SE1-201ENST00000357235 DEC1Q9P2X7 70 aa7.57□□□□□ -1.2
CDC42SE1-201ENST00000357235 MED31Q9Y3C7 131 aa7.57□□□□□ -1.2
CDC42SE1-201ENST00000357235 SZT2Q5T011 3432 aa7.57□□□□□ -1.2
CDC42SE1-201ENST00000357235 FXYD6-FXYD2A0A087WZ82 144 aa7.57□□□□□ -1.2
CDC42SE1-201ENST00000357235 ABHD14A-ACY1A0A1B0GW23 586 aa7.57□□□□□ -1.2
CDC42SE1-201ENST00000357235 MEX3AA1L020 520 aaKnown RBP7.57□□□□□ -1.2
CDC42SE1-201ENST00000357235 METTL21EPA6NDL7 271 aa7.57□□□□□ -1.2
CDC42SE1-201ENST00000357235 C5orf52A6NGY3 159 aa7.57□□□□□ -1.2
CDC42SE1-201ENST00000357235 OTOL1A6NHN0 477 aaPredicted RBP7.57□□□□□ -1.2
CDC42SE1-201ENST00000357235 SLC31A2O15432 143 aa7.57□□□□□ -1.2
CDC42SE1-201ENST00000357235 DNAJB6O75190 326 aa7.57□□□□□ -1.2
CDC42SE1-201ENST00000357235 AKR7A3O95154 331 aa7.57□□□□□ -1.2
CDC42SE1-201ENST00000357235 RCBTB2O95199 551 aa7.57□□□□□ -1.2
CDC42SE1-201ENST00000357235 GNRH1P01148 92 aa7.57□□□□□ -1.2
CDC42SE1-201ENST00000357235 UCHL1P09936 223 aa7.57□□□□□ -1.2
CDC42SE1-201ENST00000357235 ZNF888P0CJ79 500 aaPredicted RBP7.57□□□□□ -1.2
CDC42SE1-201ENST00000357235 NT5EP21589 574 aa7.57□□□□□ -1.2
CDC42SE1-201ENST00000357235 CTNNB1P35222 781 aa7.57□□□□□ -1.2
CDC42SE1-201ENST00000357235 SOX2P48431 317 aa7.57□□□□□ -1.2
CDC42SE1-201ENST00000357235 MMP15P51511 669 aa7.57□□□□□ -1.2
CDC42SE1-201ENST00000357235 RAP2BP61225 183 aa7.57□□□□□ -1.2
CDC42SE1-201ENST00000357235 TRA2BP62995 288 aaKnown RBP7.57□□□□□ -1.2
CDC42SE1-201ENST00000357235 ZNF234Q14588 700 aa7.57□□□□□ -1.2
CDC42SE1-201ENST00000357235 UBXN2BQ14CS0 331 aa7.57□□□□□ -1.2
CDC42SE1-201ENST00000357235 ZNF77Q15935 545 aa7.57□□□□□ -1.2
CDC42SE1-201ENST00000357235 TMEM35AQ53FP2 167 aa7.57□□□□□ -1.2
CDC42SE1-201ENST00000357235 HACD4Q5VWC8 232 aa7.57□□□□□ -1.2
CDC42SE1-201ENST00000357235 C11orf88Q6PI97 169 aa7.57□□□□□ -1.2
CDC42SE1-201ENST00000357235 LRRC25Q8N386 305 aaPredicted RBP7.57□□□□□ -1.2
CDC42SE1-201ENST00000357235 COX18Q8N8Q8 333 aa7.57□□□□□ -1.2
CDC42SE1-201ENST00000357235 OR52B4Q8NGK2 314 aa7.57□□□□□ -1.2
CDC42SE1-201ENST00000357235 RNASE11Q8TAA1 199 aaKnown RBP7.57□□□□□ -1.2
CDC42SE1-201ENST00000357235 SFXN5Q8TD22 340 aa7.57□□□□□ -1.2
CDC42SE1-201ENST00000357235 PXYLP1Q8TE99 480 aa7.57□□□□□ -1.2
CDC42SE1-201ENST00000357235 KISS1RQ969F8 398 aaPredicted RBP7.57□□□□□ -1.2
CDC42SE1-201ENST00000357235 PGLYRP3Q96LB9 341 aa7.57□□□□□ -1.2
CDC42SE1-201ENST00000357235 SPSB2Q99619 263 aa7.57□□□□□ -1.2
CDC42SE1-201ENST00000357235 ADAT1Q9BUB4 502 aaKnown RBP7.57□□□□□ -1.2
CDC42SE1-201ENST00000357235 MENTQ9BUN1 341 aa7.57□□□□□ -1.2
CDC42SE1-201ENST00000357235 TMPRSS13Q9BYE2 586 aa7.57□□□□□ -1.2
CDC42SE1-201ENST00000357235 FXYD6Q9H0Q3 95 aa7.57□□□□□ -1.2
CDC42SE1-201ENST00000357235 ADGRL4Q9HBW9 690 aa7.57□□□□□ -1.2
CDC42SE1-201ENST00000357235 CA10Q9NS85 328 aa7.57□□□□□ -1.2
CDC42SE1-201ENST00000357235 POT1Q9NUX5 634 aa7.57□□□□□ -1.2
CDC42SE1-201ENST00000357235 IMPA2O14732 288 aa7.57□□□□□ -1.2
CDC42SE1-201ENST00000357235 PHYHO14832 338 aa7.57□□□□□ -1.2
CDC42SE1-201ENST00000357235 MOSPD3O75425 235 aa7.57□□□□□ -1.2
CDC42SE1-201ENST00000357235 ARL6IP5O75915 188 aa7.57□□□□□ -1.2
CDC42SE1-201ENST00000357235 GIPP09681 153 aaPredicted RBP7.57□□□□□ -1.2
CDC42SE1-201ENST00000357235 CSF2RAP15509 400 aa7.57□□□□□ -1.2
CDC42SE1-201ENST00000357235 PSMB1P20618 241 aaKnown RBP7.57□□□□□ -1.2
CDC42SE1-201ENST00000357235 ACTR1BP42025 376 aa7.57□□□□□ -1.2
CDC42SE1-201ENST00000357235 CASP6P55212 293 aa7.57□□□□□ -1.2
CDC42SE1-201ENST00000357235 NRG3P56975 720 aa7.57□□□□□ -1.2
CDC42SE1-201ENST00000357235 TAS2R60P59551 318 aa7.57□□□□□ -1.2
CDC42SE1-201ENST00000357235 BDH1Q02338 343 aa7.57□□□□□ -1.2
CDC42SE1-201ENST00000357235 ERV3-1Q14264 604 aa7.57□□□□□ -1.2
CDC42SE1-201ENST00000357235 EXOSC7Q15024 291 aaKnown RBP7.57□□□□□ -1.2
CDC42SE1-201ENST00000357235 GUCA2BQ16661 112 aa7.57□□□□□ -1.2
CDC42SE1-201ENST00000357235 MANEAQ5SRI9 462 aa7.57□□□□□ -1.2
CDC42SE1-201ENST00000357235 OR5M10Q6IEU7 315 aa7.57□□□□□ -1.2
CDC42SE1-201ENST00000357235 CNKSR3Q6P9H4 555 aa7.57□□□□□ -1.2
CDC42SE1-201ENST00000357235 NHLRC1Q6VVB1 395 aa7.57□□□□□ -1.2
CDC42SE1-201ENST00000357235 NRROSQ86YC3 692 aa7.57□□□□□ -1.2
CDC42SE1-201ENST00000357235 SKA3Q8IX90 412 aa7.57□□□□□ -1.2
CDC42SE1-201ENST00000357235 TMEM185AQ8NFB2 350 aa7.57□□□□□ -1.2
CDC42SE1-201ENST00000357235 RELTQ969Z4 430 aa7.57□□□□□ -1.2
CDC42SE1-201ENST00000357235 ZC3H10Q96K80 434 aaKnown RBP7.57□□□□□ -1.2
CDC42SE1-201ENST00000357235 MOGAT1Q96PD6 335 aa7.57□□□□□ -1.2
CDC42SE1-201ENST00000357235 MS4A4EQ96PG1 132 aa7.57□□□□□ -1.2
CDC42SE1-201ENST00000357235 SDF2Q99470 211 aa7.57□□□□□ -1.2
CDC42SE1-201ENST00000357235 ZBP1Q9H171 429 aa7.57□□□□□ -1.2
CDC42SE1-201ENST00000357235 NOX3Q9HBY0 568 aa7.57□□□□□ -1.2
CDC42SE1-201ENST00000357235 NOX4Q9NPH5 578 aa7.57□□□□□ -1.2
CDC42SE1-201ENST00000357235 CMC2Q9NRP2 79 aa7.57□□□□□ -1.2
CDC42SE1-201ENST00000357235 AKAP7Q9P0M2 348 aaPredicted RBP7.57□□□□□ -1.2
CDC42SE1-201ENST00000357235 NTMQ9P121 344 aa7.57□□□□□ -1.2
CDC42SE1-201ENST00000357235 CA5BQ9Y2D0 317 aa7.57□□□□□ -1.2
CDC42SE1-201ENST00000357235 PLEKHA6Q9Y2H5 1048 aa7.57□□□□□ -1.2
CDC42SE1-201ENST00000357235 MRPS23Q9Y3D9 190 aaKnown RBP7.57□□□□□ -1.2
CDC42SE1-201ENST00000357235 ADAM18Q9Y3Q7 739 aa7.57□□□□□ -1.2
CDC42SE1-201ENST00000357235 DOCK9Q9BZ29 2069 aa7.56□□□□□ -1.2
CDC42SE1-201ENST00000357235 THSD7BQ9C0I4 1608 aa7.56□□□□□ -1.2
CDC42SE1-201ENST00000357235 MEIS3P1A6NDR6 274 aa7.56□□□□□ -1.2
CDC42SE1-201ENST00000357235 C1orf196B1AJZ1 125 aa7.56□□□□□ -1.2
CDC42SE1-201ENST00000357235 J3QRE1 110 aa7.56□□□□□ -1.2
CDC42SE1-201ENST00000357235 KLF4O43474 513 aa7.56□□□□□ -1.2
CDC42SE1-201ENST00000357235 NFATC1O95644 943 aa7.56□□□□□ -1.2
CDC42SE1-201ENST00000357235 CXCL10P02778 98 aa7.56□□□□□ -1.2
CDC42SE1-201ENST00000357235 CEBPBP17676 345 aa7.56□□□□□ -1.2
CDC42SE1-201ENST00000357235 DCTDP32321 178 aa7.56□□□□□ -1.2
CDC42SE1-201ENST00000357235 ZNF136P52737 540 aa7.56□□□□□ -1.2
CDC42SE1-201ENST00000357235 TAS2R43P59537 309 aa7.56□□□□□ -1.2
CDC42SE1-201ENST00000357235 DPTQ07507 201 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms