RNA–Protein interactions for RNA: ENST00000356922.5

LIG4-201, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-201ENST00000356922 MED31Q9Y3C7 131 aa3.58□□□□□ -1.84
LIG4-201ENST00000356922 ARHGAP21Q5T5U3 1957 aa3.58□□□□□ -1.84
LIG4-201ENST00000356922 AKAP9Q99996 3911 aa3.58□□□□□ -1.84
LIG4-201ENST00000356922 NCOA6Q14686 2063 aaPredicted RBP3.58□□□□□ -1.84
LIG4-201ENST00000356922 TRGV8A0A0C4DH27 118 aa3.58□□□□□ -1.84
LIG4-201ENST00000356922 H7C1C5 153 aa3.58□□□□□ -1.84
LIG4-201ENST00000356922 FZD7O75084 574 aa3.58□□□□□ -1.84
LIG4-201ENST00000356922 OR7A10O76100 309 aa3.58□□□□□ -1.84
LIG4-201ENST00000356922 CCNB2O95067 398 aa3.58□□□□□ -1.84
LIG4-201ENST00000356922 PMS2P2O95744 297 aa3.58□□□□□ -1.84
LIG4-201ENST00000356922 GPANK1O95872 356 aa3.58□□□□□ -1.84
LIG4-201ENST00000356922 HIST1H2ABP04908 130 aa3.58□□□□□ -1.84
LIG4-201ENST00000356922 GNAO1P09471 354 aa3.58□□□□□ -1.84
LIG4-201ENST00000356922 SAGP10523 405 aaPredicted RBP3.58□□□□□ -1.84
LIG4-201ENST00000356922 THRBP10828 461 aa3.58□□□□□ -1.84
LIG4-201ENST00000356922 ACVR2AP27037 513 aa3.58□□□□□ -1.84
LIG4-201ENST00000356922 GRNP28799 593 aaKnown RBP3.58□□□□□ -1.84
LIG4-201ENST00000356922 RBM34P42696 430 aaKnown RBP3.58□□□□□ -1.84
LIG4-201ENST00000356922 HTR3AP46098 478 aa3.58□□□□□ -1.84
LIG4-201ENST00000356922 SELENOPP49908 381 aa3.58□□□□□ -1.84
LIG4-201ENST00000356922 LCN6P62502 163 aa3.58□□□□□ -1.84
LIG4-201ENST00000356922 ERVK-25P63136 954 aa3.58□□□□□ -1.84
LIG4-201ENST00000356922 ADORA2A-AS1P86434 159 aa3.58□□□□□ -1.84
LIG4-201ENST00000356922 GUSBP1Q15486 140 aa3.58□□□□□ -1.84
LIG4-201ENST00000356922 TRIP10Q15642 601 aa3.58□□□□□ -1.84
LIG4-201ENST00000356922 ETFDHQ16134 617 aa3.58□□□□□ -1.84
LIG4-201ENST00000356922 BCL2A1Q16548 175 aa3.58□□□□□ -1.84
LIG4-201ENST00000356922 SLC35F1Q5T1Q4 408 aa3.58□□□□□ -1.84
LIG4-201ENST00000356922 B3GLCTQ6Y288 498 aa3.58□□□□□ -1.84
LIG4-201ENST00000356922 PTCHD4Q6ZW05 846 aa3.58□□□□□ -1.84
LIG4-201ENST00000356922 HIST3H2AQ7L7L0 130 aa3.58□□□□□ -1.84
LIG4-201ENST00000356922 OAFQ86UD1 273 aa3.58□□□□□ -1.84
LIG4-201ENST00000356922 ST6GALNAC3Q8NDV1 305 aa3.58□□□□□ -1.84
LIG4-201ENST00000356922 MFSD8Q8NHS3 518 aa3.58□□□□□ -1.84
LIG4-201ENST00000356922 RNF128Q8TEB7 428 aa3.58□□□□□ -1.84
LIG4-201ENST00000356922 GIPC3Q8TF64 312 aa3.58□□□□□ -1.84
LIG4-201ENST00000356922 LIPHQ8WWY8 451 aa3.58□□□□□ -1.84
LIG4-201ENST00000356922 HIST1H2ACQ93077 130 aa3.58□□□□□ -1.84
LIG4-201ENST00000356922 DDIT4LQ96D03 193 aa3.58□□□□□ -1.84
LIG4-201ENST00000356922 TSSK2Q96PF2 358 aa3.58□□□□□ -1.84
LIG4-201ENST00000356922 MBOAT4Q96T53 435 aa3.58□□□□□ -1.84
LIG4-201ENST00000356922 HHATLQ9HCP6 504 aa3.58□□□□□ -1.84
LIG4-201ENST00000356922 CHCHD3Q9NX63 227 aaKnown RBP3.58□□□□□ -1.84
LIG4-201ENST00000356922 KIF17Q9P2E2 1029 aa3.58□□□□□ -1.84
LIG4-201ENST00000356922 TRAPPC4Q9Y296 219 aa3.58□□□□□ -1.84
LIG4-201ENST00000356922 BAHCC1Q9P281 2608 aa3.58□□□□□ -1.84
LIG4-201ENST00000356922 E9PQ18 207 aa3.57□□□□□ -1.84
LIG4-201ENST00000356922 TRAF3IP2O43734 574 aaPredicted RBP3.57□□□□□ -1.84
LIG4-201ENST00000356922 DEAF1O75398 565 aaPredicted RBP3.57□□□□□ -1.84
LIG4-201ENST00000356922 ZNF432O94892 652 aa3.57□□□□□ -1.84
LIG4-201ENST00000356922 ADORA3P0DMS8 318 aa3.57□□□□□ -1.84
LIG4-201ENST00000356922 IFNGR1P15260 489 aa3.57□□□□□ -1.84
LIG4-201ENST00000356922 IDUAP35475 653 aa3.57□□□□□ -1.84
LIG4-201ENST00000356922 PTDSS1P48651 473 aaKnown RBP3.57□□□□□ -1.84
LIG4-201ENST00000356922 TSC22D1Q15714 1073 aa3.57□□□□□ -1.84
LIG4-201ENST00000356922 PDSS1Q5T2R2 415 aa3.57□□□□□ -1.84
LIG4-201ENST00000356922 ZFP1Q6P2D0 407 aa3.57□□□□□ -1.84
LIG4-201ENST00000356922 PAQR6Q6TCH4 344 aa3.57□□□□□ -1.84
LIG4-201ENST00000356922 LYPD4Q6UWN0 246 aa3.57□□□□□ -1.84
LIG4-201ENST00000356922 H1FNTQ75WM6 255 aaPredicted RBP3.57□□□□□ -1.84
LIG4-201ENST00000356922 FCRLAQ7L513 359 aa3.57□□□□□ -1.84
LIG4-201ENST00000356922 FAM122BQ7Z309 247 aa3.57□□□□□ -1.84
LIG4-201ENST00000356922 RASD2Q96D21 266 aa3.57□□□□□ -1.84
LIG4-201ENST00000356922 SGTBQ96EQ0 304 aa3.57□□□□□ -1.84
LIG4-201ENST00000356922 Q96M85 177 aa3.57□□□□□ -1.84
LIG4-201ENST00000356922 FOXN4Q96NZ1 517 aa3.57□□□□□ -1.84
LIG4-201ENST00000356922 DMRTA2Q96SC8 542 aa3.57□□□□□ -1.84
LIG4-201ENST00000356922 BDH2Q9BUT1 245 aa3.57□□□□□ -1.84
LIG4-201ENST00000356922 DCLRE1BQ9H816 532 aa3.57□□□□□ -1.84
LIG4-201ENST00000356922 IL20Q9NYY1 176 aa3.57□□□□□ -1.84
LIG4-201ENST00000356922 HDGFL3Q9Y3E1 203 aa3.57□□□□□ -1.84
LIG4-201ENST00000356922 NOTCH2Q04721 2471 aa3.57□□□□□ -1.84
LIG4-201ENST00000356922 OR14I1A6ND48 311 aa3.57□□□□□ -1.84
LIG4-201ENST00000356922 AQP7P3A6NL99 342 aa3.57□□□□□ -1.84
LIG4-201ENST00000356922 EFCAB9A8MZ26 197 aa3.57□□□□□ -1.84
LIG4-201ENST00000356922 PRRG2O14669 202 aa3.57□□□□□ -1.84
LIG4-201ENST00000356922 CYTIPO60759 359 aa3.57□□□□□ -1.84
LIG4-201ENST00000356922 KRT33AO76009 404 aa3.57□□□□□ -1.84
LIG4-201ENST00000356922 AHSA1O95433 338 aa3.57□□□□□ -1.84
LIG4-201ENST00000356922 SCG5P05408 212 aa3.57□□□□□ -1.84
LIG4-201ENST00000356922 CLUP10909 449 aa3.57□□□□□ -1.84
LIG4-201ENST00000356922 NOS3P29474 1203 aa3.57□□□□□ -1.84
LIG4-201ENST00000356922 CDKN2AP42771 156 aaKnown RBP3.57□□□□□ -1.84
LIG4-201ENST00000356922 RPS3AP61247 264 aaKnown RBP3.57□□□□□ -1.84
LIG4-201ENST00000356922 SLC34A1Q06495 639 aa3.57□□□□□ -1.84
LIG4-201ENST00000356922 TSPAN31Q12999 210 aa3.57□□□□□ -1.84
LIG4-201ENST00000356922 PTGES3Q15185 160 aaKnown RBP3.57□□□□□ -1.84
LIG4-201ENST00000356922 ACKR1Q16570 336 aa3.57□□□□□ -1.84
LIG4-201ENST00000356922 OGFRL1Q5TC84 451 aaPredicted RBP3.57□□□□□ -1.84
LIG4-201ENST00000356922 TMEM225Q6GV28 225 aa3.57□□□□□ -1.84
LIG4-201ENST00000356922 SMARCD3Q6STE5 483 aa3.57□□□□□ -1.84
LIG4-201ENST00000356922 ZNF620Q6ZNG0 422 aa3.57□□□□□ -1.84
LIG4-201ENST00000356922 CREB3L2Q70SY1 520 aa3.57□□□□□ -1.84
LIG4-201ENST00000356922 BTLAQ7Z6A9 289 aa3.57□□□□□ -1.84
LIG4-201ENST00000356922 ZDHHC13Q8IUH4 622 aa3.57□□□□□ -1.84
LIG4-201ENST00000356922 RNF113BQ8IZP6 322 aaKnown RBP3.57□□□□□ -1.84
LIG4-201ENST00000356922 ATG16L2Q8NAA4 619 aa3.57□□□□□ -1.84
LIG4-201ENST00000356922 SYT14Q8NB59 555 aa3.57□□□□□ -1.84
LIG4-201ENST00000356922 LSM14AQ8ND56 463 aaKnown RBP3.57□□□□□ -1.84
LIG4-201ENST00000356922 OR5J2Q8NH18 312 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms