RNA–Protein interactions for RNA: ENST00000355766.5

VPS13A-201, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 3

Gene VPS13A, Length 753 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-201ENST00000355766 TOXO94900 526 aa6.27□□□□□ -1.41
VPS13A-201ENST00000355766 OR6B1O95007 311 aa6.27□□□□□ -1.41
VPS13A-201ENST00000355766 DIRAS1O95057 198 aa6.27□□□□□ -1.41
VPS13A-201ENST00000355766 CELA2AP08217 269 aa6.27□□□□□ -1.41
VPS13A-201ENST00000355766 HOXD4P09016 255 aaPredicted RBP6.27□□□□□ -1.41
VPS13A-201ENST00000355766 UBTFL6P0CB48 400 aaPredicted RBP6.27□□□□□ -1.41
VPS13A-201ENST00000355766 SMIM18P0DKX4 95 aa6.27□□□□□ -1.41
VPS13A-201ENST00000355766 PNMTP11086 282 aa6.27□□□□□ -1.41
VPS13A-201ENST00000355766 DNASE1P24855 282 aa6.27□□□□□ -1.41
VPS13A-201ENST00000355766 CHRNB4P30926 498 aa6.27□□□□□ -1.41
VPS13A-201ENST00000355766 PTGER1P34995 402 aa6.27□□□□□ -1.41
VPS13A-201ENST00000355766 GSSP48637 474 aa6.27□□□□□ -1.41
VPS13A-201ENST00000355766 MAP2K6P52564 334 aa6.27□□□□□ -1.41
VPS13A-201ENST00000355766 EMP2P54851 167 aa6.27□□□□□ -1.41
VPS13A-201ENST00000355766 TPD52P55327 224 aaPredicted RBP6.27□□□□□ -1.41
VPS13A-201ENST00000355766 DLX5P56178 289 aa6.27□□□□□ -1.41
VPS13A-201ENST00000355766 CTBP2P56545 445 aa6.27□□□□□ -1.41
VPS13A-201ENST00000355766 SLC26A5P58743 744 aa6.27□□□□□ -1.41
VPS13A-201ENST00000355766 SNRPGP62308 76 aaKnown RBP6.27□□□□□ -1.41
VPS13A-201ENST00000355766 HSF1Q00613 529 aa6.27□□□□□ -1.41
VPS13A-201ENST00000355766 TSPAN31Q12999 210 aa6.27□□□□□ -1.41
VPS13A-201ENST00000355766 PIN1Q13526 163 aaPredicted RBP6.27□□□□□ -1.41
VPS13A-201ENST00000355766 GPR68Q15743 365 aa6.27□□□□□ -1.41
VPS13A-201ENST00000355766 MFSD4BQ5TF39 518 aa6.27□□□□□ -1.41
VPS13A-201ENST00000355766 ABHD17BQ5VST6 288 aa6.27□□□□□ -1.41
VPS13A-201ENST00000355766 TMEM81Q6P7N7 255 aa6.27□□□□□ -1.41
VPS13A-201ENST00000355766 TMEM154Q6P9G4 183 aa6.27□□□□□ -1.41
VPS13A-201ENST00000355766 ULK3Q6PHR2 472 aa6.27□□□□□ -1.41
VPS13A-201ENST00000355766 ZNF773Q6PK81 442 aa6.27□□□□□ -1.41
VPS13A-201ENST00000355766 C5orf46Q6UWT4 87 aa6.27□□□□□ -1.41
VPS13A-201ENST00000355766 HSDL2Q6YN16 418 aa6.27□□□□□ -1.41
VPS13A-201ENST00000355766 RASSF6Q6ZTQ3 369 aa6.27□□□□□ -1.41
VPS13A-201ENST00000355766 MBOAT2Q6ZWT7 520 aa6.27□□□□□ -1.41
VPS13A-201ENST00000355766 NDUFAF7Q7L592 441 aa6.27□□□□□ -1.41
VPS13A-201ENST00000355766 ANKRD37Q7Z713 158 aa6.27□□□□□ -1.41
VPS13A-201ENST00000355766 COMTD1Q86VU5 262 aa6.27□□□□□ -1.41
VPS13A-201ENST00000355766 VRK2Q86Y07 508 aa6.27□□□□□ -1.41
VPS13A-201ENST00000355766 SIAH3Q8IW03 269 aa6.27□□□□□ -1.41
VPS13A-201ENST00000355766 C9orf40Q8IXQ3 194 aa6.27□□□□□ -1.41
VPS13A-201ENST00000355766 HS3ST5Q8IZT8 346 aa6.27□□□□□ -1.41
VPS13A-201ENST00000355766 METTL27Q8N6F8 245 aaPredicted RBP6.27□□□□□ -1.41
VPS13A-201ENST00000355766 APCDD1LQ8NCL9 501 aa6.27□□□□□ -1.41
VPS13A-201ENST00000355766 WFDC11Q8NEX6 87 aa6.27□□□□□ -1.41
VPS13A-201ENST00000355766 OR4K5Q8NGD3 323 aa6.27□□□□□ -1.41
VPS13A-201ENST00000355766 OR4D11Q8NGI4 311 aa6.27□□□□□ -1.41
VPS13A-201ENST00000355766 OR8J1Q8NGP2 316 aa6.27□□□□□ -1.41
VPS13A-201ENST00000355766 VANGL1Q8TAA9 524 aaPredicted RBP6.27□□□□□ -1.41
VPS13A-201ENST00000355766 RNF138Q8WVD3 245 aa6.27□□□□□ -1.41
VPS13A-201ENST00000355766 PIK3R3Q92569 461 aa6.27□□□□□ -1.41
VPS13A-201ENST00000355766 SLC41A3Q96GZ6 507 aa6.27□□□□□ -1.41
VPS13A-201ENST00000355766 Q96MT0 163 aa6.27□□□□□ -1.41
VPS13A-201ENST00000355766 MUS81Q96NY9 551 aa6.27□□□□□ -1.41
VPS13A-201ENST00000355766 ADOQ96SZ5 270 aa6.27□□□□□ -1.41
VPS13A-201ENST00000355766 SECISBP2Q96T21 854 aaKnown RBP6.27□□□□□ -1.41
VPS13A-201ENST00000355766 MCHR1Q99705 422 aa6.27□□□□□ -1.41
VPS13A-201ENST00000355766 RSPO3Q9BXY4 272 aaPredicted RBP6.27□□□□□ -1.41
VPS13A-201ENST00000355766 OR8D2Q9GZM6 311 aa6.27□□□□□ -1.41
VPS13A-201ENST00000355766 LIME1Q9H400 295 aa6.27□□□□□ -1.41
VPS13A-201ENST00000355766 ANKRA2Q9H9E1 313 aa6.27□□□□□ -1.41
VPS13A-201ENST00000355766 TMEM27Q9HBJ8 222 aa6.27□□□□□ -1.41
VPS13A-201ENST00000355766 PNO1Q9NRX1 252 aaKnown RBP6.27□□□□□ -1.41
VPS13A-201ENST00000355766 KCNE5Q9UJ90 142 aa6.27□□□□□ -1.41
VPS13A-201ENST00000355766 ING1Q9UK53 422 aaPredicted RBP6.27□□□□□ -1.41
VPS13A-201ENST00000355766 NPIPA1Q9UND3 350 aa6.27□□□□□ -1.41
VPS13A-201ENST00000355766 PLEKHA6Q9Y2H5 1048 aa6.27□□□□□ -1.41
VPS13A-201ENST00000355766 TPRKBQ9Y3C4 175 aa6.27□□□□□ -1.41
VPS13A-201ENST00000355766 PCDHGB1Q9Y5G3 927 aa6.27□□□□□ -1.41
VPS13A-201ENST00000355766 GMPPBQ9Y5P6 360 aa6.27□□□□□ -1.41
VPS13A-201ENST00000355766 MAGED1Q9Y5V3 778 aaPredicted RBP6.27□□□□□ -1.41
VPS13A-201ENST00000355766 MAP1AP78559 2803 aaPredicted RBP6.27□□□□□ -1.41
VPS13A-201ENST00000355766 JMJD1CQ15652 2540 aa6.27□□□□□ -1.41
VPS13A-201ENST00000355766 FBN1P35555 2871 aaKnown RBP6.26□□□□□ -1.41
VPS13A-201ENST00000355766 A0A087WUU8 490 aa6.26□□□□□ -1.41
VPS13A-201ENST00000355766 GXYLT2A0PJZ3 443 aa6.26□□□□□ -1.41
VPS13A-201ENST00000355766 IRGMA1A4Y4 181 aa6.26□□□□□ -1.41
VPS13A-201ENST00000355766 SNTNA6NMZ2 147 aa6.26□□□□□ -1.41
VPS13A-201ENST00000355766 FAM171A2A8MVW0 826 aa6.26□□□□□ -1.41
VPS13A-201ENST00000355766 ZNHIT1O43257 154 aa6.26□□□□□ -1.41
VPS13A-201ENST00000355766 TSPAN2O60636 221 aa6.26□□□□□ -1.41
VPS13A-201ENST00000355766 BCAS1O75363 584 aaPredicted RBP6.26□□□□□ -1.41
VPS13A-201ENST00000355766 CTAG2O75638 210 aa6.26□□□□□ -1.41
VPS13A-201ENST00000355766 ZFAND5O76080 213 aa6.26□□□□□ -1.41
VPS13A-201ENST00000355766 UBL4AP11441 157 aa6.26□□□□□ -1.41
VPS13A-201ENST00000355766 PIPP12273 146 aaPredicted RBP6.26□□□□□ -1.41
VPS13A-201ENST00000355766 HPGDP15428 266 aa6.26□□□□□ -1.41
VPS13A-201ENST00000355766 TNFRSF1BP20333 461 aa6.26□□□□□ -1.41
VPS13A-201ENST00000355766 PRKACGP22612 351 aa6.26□□□□□ -1.41
VPS13A-201ENST00000355766 CRHBPP24387 322 aa6.26□□□□□ -1.41
VPS13A-201ENST00000355766 IL12BP29460 328 aa6.26□□□□□ -1.41
VPS13A-201ENST00000355766 SLC9A3P48764 834 aa6.26□□□□□ -1.41
VPS13A-201ENST00000355766 CRISP1P54107 249 aa6.26□□□□□ -1.41
VPS13A-201ENST00000355766 RAC3P60763 192 aa6.26□□□□□ -1.41
VPS13A-201ENST00000355766 COPZ1P61923 177 aa6.26□□□□□ -1.41
VPS13A-201ENST00000355766 RPP38P78345 283 aaKnown RBP6.26□□□□□ -1.41
VPS13A-201ENST00000355766 CD47Q08722 323 aa6.26□□□□□ -1.41
VPS13A-201ENST00000355766 PLCXD2Q0VAA5 305 aa6.26□□□□□ -1.41
VPS13A-201ENST00000355766 SKP2Q13309 424 aa6.26□□□□□ -1.41
VPS13A-201ENST00000355766 TUBA3CQ13748 450 aa6.26□□□□□ -1.41
VPS13A-201ENST00000355766 GANABQ14697 944 aaKnown RBP6.26□□□□□ -1.41
VPS13A-201ENST00000355766 MAD2L1BPQ15013 274 aaPredicted RBP6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms