RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 NCDNQ9UBB6 729 aa11.8□□□□□ -0.52
SYNCRIP-201ENST00000355238 STRAPQ9Y3F4 350 aaKnown RBP11.8□□□□□ -0.52
SYNCRIP-201ENST00000355238 PIK3C2AO00443 1686 aa11.8□□□□□ -0.52
SYNCRIP-201ENST00000355238 A0A1B0GTW7 788 aa11.8□□□□□ -0.52
SYNCRIP-201ENST00000355238 LOC102725191A0A1B0GVB3 256 aa11.8□□□□□ -0.52
SYNCRIP-201ENST00000355238 PTGESO14684 152 aa11.8□□□□□ -0.52
SYNCRIP-201ENST00000355238 CD53P19397 219 aa11.8□□□□□ -0.52
SYNCRIP-201ENST00000355238 HLA-FP30511 346 aa11.8□□□□□ -0.52
SYNCRIP-201ENST00000355238 SYT14P1Q58G82 188 aa11.8□□□□□ -0.52
SYNCRIP-201ENST00000355238 TMEM31Q5JXX7 168 aa11.8□□□□□ -0.52
SYNCRIP-201ENST00000355238 PRSS45Q7RTY3 260 aa11.8□□□□□ -0.52
SYNCRIP-201ENST00000355238 GPR78Q96P69 363 aa11.8□□□□□ -0.52
SYNCRIP-201ENST00000355238 RTP3Q9BQQ7 232 aa11.8□□□□□ -0.52
SYNCRIP-201ENST00000355238 MED18Q9BUE0 208 aa11.8□□□□□ -0.52
SYNCRIP-201ENST00000355238 PLEK2Q9NYT0 353 aa11.8□□□□□ -0.52
SYNCRIP-201ENST00000355238 FMN2Q9NZ56 1722 aa11.8□□□□□ -0.52
SYNCRIP-201ENST00000355238 MBP02144 154 aa11.8□□□□□ -0.52
SYNCRIP-201ENST00000355238 ZNF728P0DKX0 622 aa11.8□□□□□ -0.52
SYNCRIP-201ENST00000355238 CD1EP15812 388 aa11.8□□□□□ -0.52
SYNCRIP-201ENST00000355238 TGM1P22735 817 aa11.8□□□□□ -0.52
SYNCRIP-201ENST00000355238 CALCRP30988 508 aa11.8□□□□□ -0.52
SYNCRIP-201ENST00000355238 TRHRP34981 398 aaPredicted RBP11.8□□□□□ -0.52
SYNCRIP-201ENST00000355238 AQP6Q13520 282 aa11.8□□□□□ -0.52
SYNCRIP-201ENST00000355238 NSDHLQ15738 373 aa11.8□□□□□ -0.52
SYNCRIP-201ENST00000355238 UQCC3Q6UW78 93 aa11.8□□□□□ -0.52
SYNCRIP-201ENST00000355238 TMEM151BQ8IW70 566 aa11.8□□□□□ -0.52
SYNCRIP-201ENST00000355238 OR52R1Q8NGF1 315 aa11.8□□□□□ -0.52
SYNCRIP-201ENST00000355238 CPEB1Q9BZB8 566 aaKnown RBP11.8□□□□□ -0.52
SYNCRIP-201ENST00000355238 SPACA1Q9HBV2 294 aa11.8□□□□□ -0.52
SYNCRIP-201ENST00000355238 GPR34Q9UPC5 381 aa11.8□□□□□ -0.52
SYNCRIP-201ENST00000355238 HOXD11P31277 338 aaPredicted RBP11.8□□□□□ -0.52
SYNCRIP-201ENST00000355238 ECH1Q13011 328 aa11.8□□□□□ -0.52
SYNCRIP-201ENST00000355238 DEFB115Q30KQ5 88 aa11.8□□□□□ -0.52
SYNCRIP-201ENST00000355238 PRR18Q8N4B5 295 aa11.8□□□□□ -0.52
SYNCRIP-201ENST00000355238 OR1S2Q8NGQ3 325 aa11.8□□□□□ -0.52
SYNCRIP-201ENST00000355238 UCN3Q969E3 161 aa11.8□□□□□ -0.52
SYNCRIP-201ENST00000355238 SRRQ9GZT4 340 aa11.8□□□□□ -0.52
SYNCRIP-201ENST00000355238 BLACEA4D250 179 aa11.8□□□□□ -0.52
SYNCRIP-201ENST00000355238 TMEM235A6NFC5 223 aa11.8□□□□□ -0.52
SYNCRIP-201ENST00000355238 SNAI1O95863 264 aaPredicted RBP11.8□□□□□ -0.52
SYNCRIP-201ENST00000355238 H3F3AP84243 136 aa11.8□□□□□ -0.52
SYNCRIP-201ENST00000355238 BCDIN3DQ7Z5W3 292 aaKnown RBP11.8□□□□□ -0.52
SYNCRIP-201ENST00000355238 CHST14Q8NCH0 376 aa11.8□□□□□ -0.52
SYNCRIP-201ENST00000355238 DIO2Q92813 273 aa11.8□□□□□ -0.52
SYNCRIP-201ENST00000355238 NXF5Q9H1B4 397 aaKnown RBP11.8□□□□□ -0.52
SYNCRIP-201ENST00000355238 F10P00742 488 aa11.79□□□□□ -0.52
SYNCRIP-201ENST00000355238 XCR1P46094 333 aa11.79□□□□□ -0.52
SYNCRIP-201ENST00000355238 CRMP1Q14194 572 aa11.79□□□□□ -0.52
SYNCRIP-201ENST00000355238 CLINT1Q14677 625 aa11.79□□□□□ -0.52
SYNCRIP-201ENST00000355238 DPPA4Q7L190 304 aa11.79□□□□□ -0.52
SYNCRIP-201ENST00000355238 MKXQ8IYA7 352 aa11.79□□□□□ -0.52
SYNCRIP-201ENST00000355238 RNF175Q8N4F7 328 aa11.79□□□□□ -0.52
SYNCRIP-201ENST00000355238 MRPS28Q9Y2Q9 187 aaKnown RBP11.79□□□□□ -0.52
SYNCRIP-201ENST00000355238 MYH1P12882 1939 aa11.79□□□□□ -0.52
SYNCRIP-201ENST00000355238 MYH4Q9Y623 1939 aa11.79□□□□□ -0.52
SYNCRIP-201ENST00000355238 ZNF593O00488 134 aaPredicted RBP11.79□□□□□ -0.52
SYNCRIP-201ENST00000355238 HPNP05981 417 aa11.79□□□□□ -0.52
SYNCRIP-201ENST00000355238 CD80P33681 288 aa11.79□□□□□ -0.52
SYNCRIP-201ENST00000355238 PRLHRP49683 370 aa11.79□□□□□ -0.52
SYNCRIP-201ENST00000355238 AKR1C1Q04828 323 aa11.79□□□□□ -0.52
SYNCRIP-201ENST00000355238 KIR2DS3Q14952 304 aa11.79□□□□□ -0.52
SYNCRIP-201ENST00000355238 OR7A5Q15622 319 aa11.79□□□□□ -0.52
SYNCRIP-201ENST00000355238 OR52I2Q8NH67 350 aa11.79□□□□□ -0.52
SYNCRIP-201ENST00000355238 GCDHQ92947 438 aaPredicted RBP11.79□□□□□ -0.52
SYNCRIP-201ENST00000355238 CUTCQ9NTM9 273 aa11.79□□□□□ -0.52
SYNCRIP-201ENST00000355238 TRAPPC4Q9Y296 219 aa11.79□□□□□ -0.52
SYNCRIP-201ENST00000355238 PARP4Q9UKK3 1724 aaKnown RBP11.79□□□□□ -0.52
SYNCRIP-201ENST00000355238 TCRBV5S2A0A599 114 aa11.79□□□□□ -0.52
SYNCRIP-201ENST00000355238 FAM69BQ5VUD6 431 aa11.79□□□□□ -0.52
SYNCRIP-201ENST00000355238 TEX37Q96LM6 180 aa11.79□□□□□ -0.52
SYNCRIP-201ENST00000355238 PAAF1Q9BRP4 392 aa11.79□□□□□ -0.52
SYNCRIP-201ENST00000355238 CSAG2Q9Y5P2 127 aa11.79□□□□□ -0.52
SYNCRIP-201ENST00000355238 CPMP14384 443 aa11.79□□□□□ -0.52
SYNCRIP-201ENST00000355238 ZNF28P17035 718 aa11.79□□□□□ -0.52
SYNCRIP-201ENST00000355238 POU3F3P20264 500 aaPredicted RBP11.79□□□□□ -0.52
SYNCRIP-201ENST00000355238 OGFOD3Q6PK18 319 aa11.79□□□□□ -0.52
SYNCRIP-201ENST00000355238 DPY19L2P2Q6ZN68 376 aa11.79□□□□□ -0.52
SYNCRIP-201ENST00000355238 KIAA0907Q7Z7F0 614 aaPredicted RBP11.79□□□□□ -0.52
SYNCRIP-201ENST00000355238 SELENOIQ9C0D9 397 aa11.79□□□□□ -0.52
SYNCRIP-201ENST00000355238 FN3KRPQ9HA64 309 aa11.79□□□□□ -0.52
SYNCRIP-201ENST00000355238 GPR55Q9Y2T6 319 aaPredicted RBP11.79□□□□□ -0.52
SYNCRIP-201ENST00000355238 OR6C76A6NM76 312 aa11.79□□□□□ -0.52
SYNCRIP-201ENST00000355238 LGALS8O00214 317 aa11.79□□□□□ -0.52
SYNCRIP-201ENST00000355238 CLN5O75503 358 aa11.79□□□□□ -0.52
SYNCRIP-201ENST00000355238 FGF18O76093 207 aa11.79□□□□□ -0.52
SYNCRIP-201ENST00000355238 CSNK1A1P48729 337 aa11.79□□□□□ -0.52
SYNCRIP-201ENST00000355238 VASPP50552 380 aaPredicted RBP11.79□□□□□ -0.52
SYNCRIP-201ENST00000355238 SOWAHCQ53LP3 525 aaPredicted RBP11.79□□□□□ -0.52
SYNCRIP-201ENST00000355238 PHYHD1Q5SRE7 291 aa11.79□□□□□ -0.52
SYNCRIP-201ENST00000355238 LGI3Q8N145 548 aa11.79□□□□□ -0.52
SYNCRIP-201ENST00000355238 TNFRSF13CQ96RJ3 184 aa11.79□□□□□ -0.52
SYNCRIP-201ENST00000355238 GAR1Q9NY12 217 aaKnown RBP11.79□□□□□ -0.52
SYNCRIP-201ENST00000355238 KCMF1Q9P0J7 381 aa11.79□□□□□ -0.52
SYNCRIP-201ENST00000355238 CBLCQ9ULV8 474 aa11.79□□□□□ -0.52
SYNCRIP-201ENST00000355238 FAM227AF5H4B4 570 aa11.78□□□□□ -0.52
SYNCRIP-201ENST00000355238 DGCR2P98153 550 aa11.78□□□□□ -0.52
SYNCRIP-201ENST00000355238 BDH1Q02338 343 aa11.78□□□□□ -0.52
SYNCRIP-201ENST00000355238 TLE1Q04724 770 aa11.78□□□□□ -0.52
SYNCRIP-201ENST00000355238 PDZD11Q5EBL8 140 aa11.78□□□□□ -0.52
SYNCRIP-201ENST00000355238 OR9K2Q8NGE7 335 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms