RNA–Protein interactions for RNA: ENST00000354513.9

PDGFA-201, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 1 (best) BASIC

Gene PDGFA, Length 1,308 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-201ENST00000354513 NXNQ6DKJ4 435 aa13.75□□□□□ -0.21
PDGFA-201ENST00000354513 CGB2Q6NT52 195 aa13.75□□□□□ -0.21
PDGFA-201ENST00000354513 SLC2A7Q6PXP3 512 aa13.75□□□□□ -0.21
PDGFA-201ENST00000354513 VHLLQ6RSH7 139 aa13.75□□□□□ -0.21
PDGFA-201ENST00000354513 TMEM123Q8N131 208 aa13.75□□□□□ -0.21
PDGFA-201ENST00000354513 ITCHQ96J02 903 aa13.75□□□□□ -0.21
PDGFA-201ENST00000354513 SIKE1Q9BRV8 207 aa13.75□□□□□ -0.21
PDGFA-201ENST00000354513 BPESC1Q9GZL8 116 aa13.75□□□□□ -0.21
PDGFA-201ENST00000354513 FAM107BQ9H098 131 aa13.75□□□□□ -0.21
PDGFA-201ENST00000354513 SHARPINQ9H0F6 387 aa13.75□□□□□ -0.21
PDGFA-201ENST00000354513 NSRP1Q9H0G5 558 aaKnown RBP13.75□□□□□ -0.21
PDGFA-201ENST00000354513 CHODLQ9H9P2 273 aa13.75□□□□□ -0.21
PDGFA-201ENST00000354513 A4GALTQ9NPC4 353 aa13.75□□□□□ -0.21
PDGFA-201ENST00000354513 SLC25A37Q9NYZ2 338 aa13.75□□□□□ -0.21
PDGFA-201ENST00000354513 RCE1Q9Y256 329 aa13.75□□□□□ -0.21
PDGFA-201ENST00000354513 PCDHB14Q9Y5E9 798 aa13.75□□□□□ -0.21
PDGFA-201ENST00000354513 A0A0G2JND7 137 aa13.74□□□□□ -0.21
PDGFA-201ENST00000354513 LOC390937A0A1W2PQ73 354 aa13.74□□□□□ -0.21
PDGFA-201ENST00000354513 B9A039 149 aa13.74□□□□□ -0.21
PDGFA-201ENST00000354513 KRT33AO76009 404 aa13.74□□□□□ -0.21
PDGFA-201ENST00000354513 CRYAAP02489 173 aa13.74□□□□□ -0.21
PDGFA-201ENST00000354513 IL2RGP31785 369 aa13.74□□□□□ -0.21
PDGFA-201ENST00000354513 THBS4P35443 961 aa13.74□□□□□ -0.21
PDGFA-201ENST00000354513 IDH3AP50213 366 aa13.74□□□□□ -0.21
PDGFA-201ENST00000354513 POLR2JP52435 117 aaKnown RBP13.74□□□□□ -0.21
PDGFA-201ENST00000354513 UBE2NP61088 152 aaKnown RBP13.74□□□□□ -0.21
PDGFA-201ENST00000354513 RGNQ15493 299 aa13.74□□□□□ -0.21
PDGFA-201ENST00000354513 ZSWIM7Q19AV6 140 aa13.74□□□□□ -0.21
PDGFA-201ENST00000354513 MSMPQ1L6U9 139 aa13.74□□□□□ -0.21
PDGFA-201ENST00000354513 ZNF311Q5JNZ3 666 aa13.74□□□□□ -0.21
PDGFA-201ENST00000354513 FAM120AOSQ5T036 256 aa13.74□□□□□ -0.21
PDGFA-201ENST00000354513 SLC46A3Q7Z3Q1 461 aa13.74□□□□□ -0.21
PDGFA-201ENST00000354513 CPLX4Q7Z7G2 160 aa13.74□□□□□ -0.21
PDGFA-201ENST00000354513 ZCCHC24Q8N2G6 241 aaKnown RBP13.74□□□□□ -0.21
PDGFA-201ENST00000354513 FAM169BQ8N8A8 192 aa13.74□□□□□ -0.21
PDGFA-201ENST00000354513 NUP37Q8NFH4 326 aa13.74□□□□□ -0.21
PDGFA-201ENST00000354513 TAAR8Q969N4 342 aa13.74□□□□□ -0.21
PDGFA-201ENST00000354513 SLC25A36Q96CQ1 311 aa13.74□□□□□ -0.21
PDGFA-201ENST00000354513 VRK1Q99986 396 aaPredicted RBP13.74□□□□□ -0.21
PDGFA-201ENST00000354513 EBF4Q9BQW3 602 aa13.74□□□□□ -0.21
PDGFA-201ENST00000354513 NOX3Q9HBY0 568 aa13.74□□□□□ -0.21
PDGFA-201ENST00000354513 GPR35Q9HC97 309 aa13.74□□□□□ -0.21
PDGFA-201ENST00000354513 IGHV2OR16-5A0A0B4J2B6 119 aa13.73□□□□□ -0.21
PDGFA-201ENST00000354513 LOC100289279A0A1B0GTE1 492 aa13.73□□□□□ -0.21
PDGFA-201ENST00000354513 OR6C65A6NJZ3 312 aa13.73□□□□□ -0.21
PDGFA-201ENST00000354513 M0R082 166 aa13.73□□□□□ -0.21
PDGFA-201ENST00000354513 SEC14L2O76054 403 aa13.73□□□□□ -0.21
PDGFA-201ENST00000354513 ANP32DO95626 131 aa13.73□□□□□ -0.21
PDGFA-201ENST00000354513 HPRP00739 348 aa13.73□□□□□ -0.21
PDGFA-201ENST00000354513 APEHP13798 732 aaKnown RBP13.73□□□□□ -0.21
PDGFA-201ENST00000354513 CBR1P16152 277 aa13.73□□□□□ -0.21
PDGFA-201ENST00000354513 ZNF23P17027 643 aa13.73□□□□□ -0.21
PDGFA-201ENST00000354513 DRD4P21917 467 aa13.73□□□□□ -0.21
PDGFA-201ENST00000354513 THBS2P35442 1172 aa13.73□□□□□ -0.21
PDGFA-201ENST00000354513 IDH3GP51553 393 aaPredicted RBP13.73□□□□□ -0.21
PDGFA-201ENST00000354513 SH3BGRP55822 239 aaPredicted RBP13.73□□□□□ -0.21
PDGFA-201ENST00000354513 CEACAM16Q2WEN9 425 aa13.73□□□□□ -0.21
PDGFA-201ENST00000354513 GLIPR1L2Q4G1C9 344 aa13.73□□□□□ -0.21
PDGFA-201ENST00000354513 FAM166AQ6J272 317 aa13.73□□□□□ -0.21
PDGFA-201ENST00000354513 NHLRC1Q6VVB1 395 aa13.73□□□□□ -0.21
PDGFA-201ENST00000354513 ZNF417Q8TAU3 575 aa13.73□□□□□ -0.21
PDGFA-201ENST00000354513 SLC35B4Q969S0 331 aa13.73□□□□□ -0.21
PDGFA-201ENST00000354513 ZNF75AQ96N20 296 aa13.73□□□□□ -0.21
PDGFA-201ENST00000354513 OXGR1Q96P68 337 aa13.73□□□□□ -0.21
PDGFA-201ENST00000354513 OR2M2Q96R28 347 aa13.73□□□□□ -0.21
PDGFA-201ENST00000354513 ZNF587Q96SQ5 575 aaPredicted RBP13.73□□□□□ -0.21
PDGFA-201ENST00000354513 DOK1Q99704 481 aa13.73□□□□□ -0.21
PDGFA-201ENST00000354513 WFDC6Q9BQY6 131 aa13.73□□□□□ -0.21
PDGFA-201ENST00000354513 RABEP2Q9H5N1 569 aa13.73□□□□□ -0.21
PDGFA-201ENST00000354513 ZNF442Q9H7R0 627 aa13.73□□□□□ -0.21
PDGFA-201ENST00000354513 TCF7L2Q9NQB0 619 aa13.73□□□□□ -0.21
PDGFA-201ENST00000354513 KLHL14Q9P2G3 628 aa13.73□□□□□ -0.21
PDGFA-201ENST00000354513 KCNS2Q9ULS6 477 aa13.73□□□□□ -0.21
PDGFA-201ENST00000354513 IFT52Q9Y366 437 aa13.73□□□□□ -0.21
PDGFA-201ENST00000354513 A0A1B0GWA3 101 aa13.72□□□□□ -0.21
PDGFA-201ENST00000354513 LRP5LA4QPB2 252 aa13.72□□□□□ -0.21
PDGFA-201ENST00000354513 CLIC1O00299 241 aa13.72□□□□□ -0.21
PDGFA-201ENST00000354513 TPST1O60507 370 aa13.72□□□□□ -0.21
PDGFA-201ENST00000354513 SHOX2O60902 331 aaPredicted RBP13.72□□□□□ -0.21
PDGFA-201ENST00000354513 STAMBPO95630 424 aa13.72□□□□□ -0.21
PDGFA-201ENST00000354513 ARAFP10398 606 aa13.72□□□□□ -0.21
PDGFA-201ENST00000354513 HOXB1P14653 301 aaPredicted RBP13.72□□□□□ -0.21
PDGFA-201ENST00000354513 GIFP27352 417 aa13.72□□□□□ -0.21
PDGFA-201ENST00000354513 GRPRP30550 384 aa13.72□□□□□ -0.21
PDGFA-201ENST00000354513 ARFIP2P53365 341 aa13.72□□□□□ -0.21
PDGFA-201ENST00000354513 CARTPTQ16568 116 aa13.72□□□□□ -0.21
PDGFA-201ENST00000354513 C6orf10Q5SRN2 563 aa13.72□□□□□ -0.21
PDGFA-201ENST00000354513 MDP1Q86V88 176 aa13.72□□□□□ -0.21
PDGFA-201ENST00000354513 FUNDC1Q8IVP5 155 aa13.72□□□□□ -0.21
PDGFA-201ENST00000354513 CDK20Q8IZL9 346 aa13.72□□□□□ -0.21
PDGFA-201ENST00000354513 SVOPLQ8N434 492 aa13.72□□□□□ -0.21
PDGFA-201ENST00000354513 LSMEM1Q8N8F7 131 aa13.72□□□□□ -0.21
PDGFA-201ENST00000354513 ANKK1Q8NFD2 765 aa13.72□□□□□ -0.21
PDGFA-201ENST00000354513 BBS10Q8TAM1 723 aa13.72□□□□□ -0.21
PDGFA-201ENST00000354513 KCNS3Q9BQ31 491 aa13.72□□□□□ -0.21
PDGFA-201ENST00000354513 ELAC2Q9BQ52 826 aaKnown RBP13.72□□□□□ -0.21
PDGFA-201ENST00000354513 CCDC28BQ9BUN5 200 aa13.72□□□□□ -0.21
PDGFA-201ENST00000354513 C19orf24Q9BVV8 132 aa13.72□□□□□ -0.21
PDGFA-201ENST00000354513 TMEM120AQ9BXJ8 343 aa13.72□□□□□ -0.21
PDGFA-201ENST00000354513 IKZF5Q9H5V7 419 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms