RNA–Protein interactions for RNA: ENST00000352886.10

SHMT1-202, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 2 BASIC

Gene SHMT1, Length 2,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-202ENST00000352886 BCL2L15Q5TBC7 163 aa19.82■□□□□ 0.76
SHMT1-202ENST00000352886 SLC16A9Q7RTY1 509 aa19.82■□□□□ 0.76
SHMT1-202ENST00000352886 SLC35F3Q8IY50 421 aa19.82■□□□□ 0.76
SHMT1-202ENST00000352886 ZNF687Q8N1G0 1237 aa19.82■□□□□ 0.76
SHMT1-202ENST00000352886 EXD3Q8N9H8 876 aa19.82■□□□□ 0.76
SHMT1-202ENST00000352886 OR1F2PQ96R84 312 aa19.82■□□□□ 0.76
SHMT1-202ENST00000352886 RAB33BQ9H082 229 aa19.82■□□□□ 0.76
SHMT1-202ENST00000352886 SRA1Q9HD15 236 aaKnown RBP19.82■□□□□ 0.76
SHMT1-202ENST00000352886 NUDT15Q9NV35 164 aa19.82■□□□□ 0.76
SHMT1-202ENST00000352886 GRHPRQ9UBQ7 328 aa19.82■□□□□ 0.76
SHMT1-202ENST00000352886 MRTO4Q9UKD2 239 aaKnown RBP19.82■□□□□ 0.76
SHMT1-202ENST00000352886 RNF215Q9Y6U7 377 aa19.82■□□□□ 0.76
SHMT1-202ENST00000352886 TRAV6A0A075B6T7 132 aa19.81■□□□□ 0.76
SHMT1-202ENST00000352886 H7C1C5 153 aa19.81■□□□□ 0.76
SHMT1-202ENST00000352886 DCTN6O00399 190 aa19.81■□□□□ 0.76
SHMT1-202ENST00000352886 RPP14O95059 124 aaKnown RBP19.81■□□□□ 0.76
SHMT1-202ENST00000352886 EVI2BP34910 448 aa19.81■□□□□ 0.76
SHMT1-202ENST00000352886 LCN6P62502 163 aa19.81■□□□□ 0.76
SHMT1-202ENST00000352886 PHYHIPQ92561 330 aa19.81■□□□□ 0.76
SHMT1-202ENST00000352886 RNF166Q96A37 237 aaPredicted RBP19.81■□□□□ 0.76
SHMT1-202ENST00000352886 KLHDC2Q9Y2U9 406 aa19.81■□□□□ 0.76
SHMT1-202ENST00000352886 ASXL3Q9C0F0 2248 aa19.81■□□□□ 0.76
SHMT1-202ENST00000352886 A0A087WV48 116 aa19.81■□□□□ 0.76
SHMT1-202ENST00000352886 OR8G3PP0DMU2 310 aa19.81■□□□□ 0.76
SHMT1-202ENST00000352886 GZMKP49863 264 aa19.81■□□□□ 0.76
SHMT1-202ENST00000352886 EFNA3P52797 238 aa19.81■□□□□ 0.76
SHMT1-202ENST00000352886 ZNF117Q03924 483 aa19.81■□□□□ 0.76
SHMT1-202ENST00000352886 CAMK2BQ13554 666 aa19.81■□□□□ 0.76
SHMT1-202ENST00000352886 YIF1BQ5BJH7 314 aa19.81■□□□□ 0.76
SHMT1-202ENST00000352886 OGFOD3Q6PK18 319 aa19.81■□□□□ 0.76
SHMT1-202ENST00000352886 RGP1Q92546 391 aaPredicted RBP19.81■□□□□ 0.76
SHMT1-202ENST00000352886 GFI1Q99684 422 aa19.81■□□□□ 0.76
SHMT1-202ENST00000352886 MOKQ9UQ07 419 aa19.81■□□□□ 0.76
SHMT1-202ENST00000352886 A0A0A6YYJ9 748 aa19.8■□□□□ 0.76
SHMT1-202ENST00000352886 C17orf51A8MQB3 221 aa19.8■□□□□ 0.76
SHMT1-202ENST00000352886 HCRTR2O43614 444 aa19.8■□□□□ 0.76
SHMT1-202ENST00000352886 C1QBP02746 253 aa19.8■□□□□ 0.76
SHMT1-202ENST00000352886 ARL4DP49703 201 aa19.8■□□□□ 0.76
SHMT1-202ENST00000352886 OR1D5P58170 312 aa19.8■□□□□ 0.76
SHMT1-202ENST00000352886 ZP2Q05996 745 aa19.8■□□□□ 0.76
SHMT1-202ENST00000352886 TDGQ13569 410 aa19.8■□□□□ 0.76
SHMT1-202ENST00000352886 MESTQ5EB52 335 aa19.8■□□□□ 0.76
SHMT1-202ENST00000352886 SNAP47Q5SQN1 464 aa19.8■□□□□ 0.76
SHMT1-202ENST00000352886 HES5Q5TA89 166 aa19.8■□□□□ 0.76
SHMT1-202ENST00000352886 POMZP3Q6PJE2 187 aa19.8■□□□□ 0.76
SHMT1-202ENST00000352886 LIX1LQ8IVB5 337 aa19.8■□□□□ 0.76
SHMT1-202ENST00000352886 SIAH3Q8IW03 269 aa19.8■□□□□ 0.76
SHMT1-202ENST00000352886 IZUMO1Q8IYV9 350 aa19.8■□□□□ 0.76
SHMT1-202ENST00000352886 TAAR8Q969N4 342 aa19.8■□□□□ 0.76
SHMT1-202ENST00000352886 DNAJA3Q96EY1 480 aa19.8■□□□□ 0.76
SHMT1-202ENST00000352886 TSPAN32Q96QS1 320 aa19.8■□□□□ 0.76
SHMT1-202ENST00000352886 NUDT9Q9BW91 350 aa19.8■□□□□ 0.76
SHMT1-202ENST00000352886 TSPAN10Q9H1Z9 355 aaPredicted RBP19.8■□□□□ 0.76
SHMT1-202ENST00000352886 DPAGT1Q9H3H5 408 aa19.8■□□□□ 0.76
SHMT1-202ENST00000352886 CAMK2AQ9UQM7 478 aa19.8■□□□□ 0.76
SHMT1-202ENST00000352886 UNC13CQ8NB66 2214 aa19.8■□□□□ 0.76
SHMT1-202ENST00000352886 MBTPS2O43462 519 aa19.8■□□□□ 0.76
SHMT1-202ENST00000352886 RPL6Q02878 288 aaKnown RBP19.8■□□□□ 0.76
SHMT1-202ENST00000352886 PRSS45Q7RTY3 260 aa19.8■□□□□ 0.76
SHMT1-202ENST00000352886 ZNF433Q8N7K0 673 aaPredicted RBP19.8■□□□□ 0.76
SHMT1-202ENST00000352886 ADAD1Q96M93 576 aaKnown RBP19.8■□□□□ 0.76
SHMT1-202ENST00000352886 LAT2Q9GZY6 243 aa19.8■□□□□ 0.76
SHMT1-202ENST00000352886 SLA2Q9H6Q3 261 aa19.8■□□□□ 0.76
SHMT1-202ENST00000352886 ANKRD10Q9NXR5 420 aa19.8■□□□□ 0.76
SHMT1-202ENST00000352886 PCDHGA9Q9Y5G4 932 aaKnown RBP19.8■□□□□ 0.76
SHMT1-202ENST00000352886 ALPK2Q86TB3 2170 aa19.79■□□□□ 0.76
SHMT1-202ENST00000352886 SMLR1H3BR10 107 aa19.79■□□□□ 0.76
SHMT1-202ENST00000352886 TXNDC12O95881 172 aa19.79■□□□□ 0.76
SHMT1-202ENST00000352886 IL12BP29460 328 aa19.79■□□□□ 0.76
SHMT1-202ENST00000352886 EPHA4P54764 986 aa19.79■□□□□ 0.76
SHMT1-202ENST00000352886 HSD11B2P80365 405 aa19.79■□□□□ 0.76
SHMT1-202ENST00000352886 MRPL28Q13084 256 aaKnown RBP19.79■□□□□ 0.76
SHMT1-202ENST00000352886 MAB21L1Q13394 359 aa19.79■□□□□ 0.76
SHMT1-202ENST00000352886 ELAVL1Q15717 326 aaKnown RBP19.79■□□□□ 0.76
SHMT1-202ENST00000352886 VWA2Q5GFL6 755 aa19.79■□□□□ 0.76
SHMT1-202ENST00000352886 UBE2NLQ5JXB2 153 aa19.79■□□□□ 0.76
SHMT1-202ENST00000352886 SLC6A19Q695T7 634 aa19.79■□□□□ 0.76
SHMT1-202ENST00000352886 MTFR2Q6P444 385 aa19.79■□□□□ 0.76
SHMT1-202ENST00000352886 FAM220AQ7Z4H9 259 aa19.79■□□□□ 0.76
SHMT1-202ENST00000352886 TIGD4Q8IY51 512 aa19.79■□□□□ 0.76
SHMT1-202ENST00000352886 LILRB4Q8NHJ6 448 aa19.79■□□□□ 0.76
SHMT1-202ENST00000352886 ADAM19Q9H013 955 aa19.79■□□□□ 0.76
SHMT1-202ENST00000352886 COL5A1P20908 1838 aaPredicted RBP19.79■□□□□ 0.76
SHMT1-202ENST00000352886 PCNX3Q9H6A9 2034 aa19.79■□□□□ 0.76
SHMT1-202ENST00000352886 TVP23AA6NH52 213 aa19.78■□□□□ 0.76
SHMT1-202ENST00000352886 DHFRP00374 187 aa19.78■□□□□ 0.76
SHMT1-202ENST00000352886 ADRB1P08588 477 aa19.78■□□□□ 0.76
SHMT1-202ENST00000352886 TACSTD2P09758 323 aa19.78■□□□□ 0.76
SHMT1-202ENST00000352886 ITPKBP27987 946 aa19.78■□□□□ 0.76
SHMT1-202ENST00000352886 EBPQ15125 230 aaKnown RBP19.78■□□□□ 0.76
SHMT1-202ENST00000352886 TOMM34Q15785 309 aaPredicted RBP19.78■□□□□ 0.76
SHMT1-202ENST00000352886 C9orf40Q8IXQ3 194 aa19.78■□□□□ 0.76
SHMT1-202ENST00000352886 PRSS58Q8IYP2 241 aa19.78■□□□□ 0.76
SHMT1-202ENST00000352886 TDHQ8IZJ6 230 aa19.78■□□□□ 0.76
SHMT1-202ENST00000352886 OR1L3Q8NH93 324 aa19.78■□□□□ 0.76
SHMT1-202ENST00000352886 ZFAND1Q8TCF1 268 aa19.78■□□□□ 0.76
SHMT1-202ENST00000352886 MVB12AQ96EY5 273 aa19.78■□□□□ 0.76
SHMT1-202ENST00000352886 NIPAL2Q9H841 368 aa19.78■□□□□ 0.76
SHMT1-202ENST00000352886 MRM2Q9UI43 246 aaKnown RBP19.78■□□□□ 0.76
SHMT1-202ENST00000352886 CEP192Q8TEP8 1941 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms