RNA–Protein interactions for RNA: ENST00000349225.2

RLIM-202, Transcript of ring finger protein, LIM domain interacting, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RLIM, Length 3,478 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RLIM-202ENST00000349225 NKAIN2Q5VXU1 208 aa13.04□□□□□ -0.32
RLIM-202ENST00000349225 RPL22L1Q6P5R6 122 aaKnown RBP13.04□□□□□ -0.32
RLIM-202ENST00000349225 SLC24A5Q71RS6 500 aa13.04□□□□□ -0.32
RLIM-202ENST00000349225 SLC29A4Q7RTT9 530 aa13.04□□□□□ -0.32
RLIM-202ENST00000349225 ZNF547Q8IVP9 402 aa13.04□□□□□ -0.32
RLIM-202ENST00000349225 SKA3Q8IX90 412 aa13.04□□□□□ -0.32
RLIM-202ENST00000349225 OR5M8Q8NGP6 311 aa13.04□□□□□ -0.32
RLIM-202ENST00000349225 NKX3-1Q99801 234 aaPredicted RBP13.04□□□□□ -0.32
RLIM-202ENST00000349225 WDR77Q9BQA1 342 aaPredicted RBP13.04□□□□□ -0.32
RLIM-202ENST00000349225 SEC11CQ9BY50 192 aa13.04□□□□□ -0.32
RLIM-202ENST00000349225 TMEM100Q9NV29 134 aa13.04□□□□□ -0.32
RLIM-202ENST00000349225 Q9Y3F1 56 aa13.04□□□□□ -0.32
RLIM-202ENST00000349225 FAM86C2PA6NEL3 165 aa13.04□□□□□ -0.32
RLIM-202ENST00000349225 NRG2O14511 850 aaPredicted RBP13.04□□□□□ -0.32
RLIM-202ENST00000349225 TXNL1O43396 289 aa13.04□□□□□ -0.32
RLIM-202ENST00000349225 PAPLNO95428 1278 aa13.04□□□□□ -0.32
RLIM-202ENST00000349225 FBP1P09467 338 aa13.04□□□□□ -0.32
RLIM-202ENST00000349225 STX4Q12846 297 aa13.04□□□□□ -0.32
RLIM-202ENST00000349225 NDUFAF6Q330K2 333 aa13.04□□□□□ -0.32
RLIM-202ENST00000349225 AMZ1Q400G9 498 aa13.04□□□□□ -0.32
RLIM-202ENST00000349225 FNDC3BQ53EP0 1204 aaKnown RBP13.04□□□□□ -0.32
RLIM-202ENST00000349225 SLC16A11Q8NCK7 471 aa13.04□□□□□ -0.32
RLIM-202ENST00000349225 OR5AP2Q8NGF4 316 aa13.04□□□□□ -0.32
RLIM-202ENST00000349225 PPP1R1CQ8WVI7 109 aa13.04□□□□□ -0.32
RLIM-202ENST00000349225 ARL5BQ96KC2 179 aa13.04□□□□□ -0.32
RLIM-202ENST00000349225 CLCC1Q96S66 551 aa13.04□□□□□ -0.32
RLIM-202ENST00000349225 LAT2Q9GZY6 243 aa13.04□□□□□ -0.32
RLIM-202ENST00000349225 ATG4BQ9Y4P1 393 aa13.04□□□□□ -0.32
RLIM-202ENST00000349225 LRRK1Q38SD2 2015 aa13.03□□□□□ -0.32
RLIM-202ENST00000349225 VCANP13611 3396 aa13.03□□□□□ -0.32
RLIM-202ENST00000349225 A0A1W2PR48 441 aa13.03□□□□□ -0.32
RLIM-202ENST00000349225 FARS2O95363 451 aaKnown RBP13.03□□□□□ -0.32
RLIM-202ENST00000349225 S100A9P06702 114 aaKnown RBP13.03□□□□□ -0.32
RLIM-202ENST00000349225 GTF2F2P13984 249 aa13.03□□□□□ -0.32
RLIM-202ENST00000349225 AGTR1P30556 359 aa13.03□□□□□ -0.32
RLIM-202ENST00000349225 GPX4P36969 197 aaPredicted RBP13.03□□□□□ -0.32
RLIM-202ENST00000349225 LCTLQ6UWM7 567 aa13.03□□□□□ -0.32
RLIM-202ENST00000349225 TMEM64Q6YI46 380 aa13.03□□□□□ -0.32
RLIM-202ENST00000349225 OR9A2Q8NGT5 310 aa13.03□□□□□ -0.32
RLIM-202ENST00000349225 TMEM239Q8WW34 195 aa13.03□□□□□ -0.32
RLIM-202ENST00000349225 FGF13Q92913 245 aa13.03□□□□□ -0.32
RLIM-202ENST00000349225 ZNF775Q96BV0 537 aaPredicted RBP13.03□□□□□ -0.32
RLIM-202ENST00000349225 PRMT8Q9NR22 394 aaPredicted RBP13.03□□□□□ -0.32
RLIM-202ENST00000349225 USP36Q9P275 1121 aaKnown RBP13.03□□□□□ -0.32
RLIM-202ENST00000349225 HS3ST2Q9Y278 367 aa13.03□□□□□ -0.32
RLIM-202ENST00000349225 A0A0A6YYC8 382 aaPredicted RBP13.03□□□□□ -0.32
RLIM-202ENST00000349225 I3L1I5 382 aaPredicted RBP13.03□□□□□ -0.32
RLIM-202ENST00000349225 EOMESO95936 686 aa13.03□□□□□ -0.32
RLIM-202ENST00000349225 OR8U8P0C7N1 319 aa13.03□□□□□ -0.32
RLIM-202ENST00000349225 CALCBP10092 127 aa13.03□□□□□ -0.32
RLIM-202ENST00000349225 SLC25A4P12235 298 aa13.03□□□□□ -0.32
RLIM-202ENST00000349225 BTF3P20290 206 aaKnown RBP13.03□□□□□ -0.32
RLIM-202ENST00000349225 ACTC1P68032 377 aa13.03□□□□□ -0.32
RLIM-202ENST00000349225 ACTA1P68133 377 aa13.03□□□□□ -0.32
RLIM-202ENST00000349225 PEA15Q15121 130 aa13.03□□□□□ -0.32
RLIM-202ENST00000349225 TSC22D1Q15714 1073 aa13.03□□□□□ -0.32
RLIM-202ENST00000349225 INPP5JQ15735 1006 aaPredicted RBP13.03□□□□□ -0.32
RLIM-202ENST00000349225 PRAMEF8Q5VWM4 474 aa13.03□□□□□ -0.32
RLIM-202ENST00000349225 PRAMEF7Q5VXH5 474 aa13.03□□□□□ -0.32
RLIM-202ENST00000349225 CDPF1Q6NVV7 123 aa13.03□□□□□ -0.32
RLIM-202ENST00000349225 TMED4Q7Z7H5 227 aa13.03□□□□□ -0.32
RLIM-202ENST00000349225 CMTM8Q8IZV2 173 aa13.03□□□□□ -0.32
RLIM-202ENST00000349225 ZSCAN1Q8NBB4 408 aa13.03□□□□□ -0.32
RLIM-202ENST00000349225 RPS4Y2Q8TD47 263 aa13.03□□□□□ -0.32
RLIM-202ENST00000349225 TREM1Q9NP99 234 aa13.03□□□□□ -0.32
RLIM-202ENST00000349225 RCC2Q9P258 522 aaKnown RBP13.03□□□□□ -0.32
RLIM-202ENST00000349225 RPH3AQ9Y2J0 694 aaPredicted RBP13.03□□□□□ -0.32
RLIM-202ENST00000349225 TRAV8-7A0A075B6U6 113 aa13.03□□□□□ -0.32
RLIM-202ENST00000349225 OR14I1A6ND48 311 aa13.03□□□□□ -0.32
RLIM-202ENST00000349225 C9JQL5 133 aa13.03□□□□□ -0.32
RLIM-202ENST00000349225 XRCC3O43542 346 aa13.03□□□□□ -0.32
RLIM-202ENST00000349225 PRICKLE3O43900 615 aaPredicted RBP13.03□□□□□ -0.32
RLIM-202ENST00000349225 FAM157CP0CG43 387 aa13.03□□□□□ -0.32
RLIM-202ENST00000349225 LIPCP11150 499 aa13.03□□□□□ -0.32
RLIM-202ENST00000349225 APEHP13798 732 aaKnown RBP13.03□□□□□ -0.32
RLIM-202ENST00000349225 ST6GAL1P15907 406 aa13.03□□□□□ -0.32
RLIM-202ENST00000349225 GRPRP30550 384 aa13.03□□□□□ -0.32
RLIM-202ENST00000349225 OR4C11Q6IEV9 310 aa13.03□□□□□ -0.32
RLIM-202ENST00000349225 GDPD4Q6W3E5 623 aa13.03□□□□□ -0.32
RLIM-202ENST00000349225 SYS1Q8N2H4 156 aa13.03□□□□□ -0.32
RLIM-202ENST00000349225 CLEC1AQ8NC01 280 aa13.03□□□□□ -0.32
RLIM-202ENST00000349225 OR2A12Q8NGT7 310 aa13.03□□□□□ -0.32
RLIM-202ENST00000349225 HIST1H2BAQ96A08 127 aa13.03□□□□□ -0.32
RLIM-202ENST00000349225 ZC3H10Q96K80 434 aaKnown RBP13.03□□□□□ -0.32
RLIM-202ENST00000349225 OBSL1O75147 1896 aa13.02□□□□□ -0.32
RLIM-202ENST00000349225 POM121BA6NF01 834 aa13.02□□□□□ -0.32
RLIM-202ENST00000349225 ZNF705EA8MWA4 302 aaPredicted RBP13.02□□□□□ -0.32
RLIM-202ENST00000349225 F5H0A9 414 aaPredicted RBP13.02□□□□□ -0.32
RLIM-202ENST00000349225 H3BSH0 61 aa13.02□□□□□ -0.32
RLIM-202ENST00000349225 POP4O95707 220 aaKnown RBP13.02□□□□□ -0.32
RLIM-202ENST00000349225 CAPZA1P52907 286 aa13.02□□□□□ -0.32
RLIM-202ENST00000349225 F2RL1P55085 397 aa13.02□□□□□ -0.32
RLIM-202ENST00000349225 RAB5BP61020 215 aa13.02□□□□□ -0.32
RLIM-202ENST00000349225 PLAURQ03405 335 aa13.02□□□□□ -0.32
RLIM-202ENST00000349225 LTBQ06643 244 aa13.02□□□□□ -0.32
RLIM-202ENST00000349225 SRSF4Q08170 494 aaKnown RBP13.02□□□□□ -0.32
RLIM-202ENST00000349225 FAM111BQ6SJ93 734 aa13.02□□□□□ -0.32
RLIM-202ENST00000349225 ACOT7LQ6ZUV0 252 aa13.02□□□□□ -0.32
RLIM-202ENST00000349225 KRT77Q7Z794 578 aa13.02□□□□□ -0.32
RLIM-202ENST00000349225 NUP43Q8NFH3 380 aa13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms