RNA–Protein interactions for RNA: ENST00000348987.4

SCARF1-202, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARF1, Length 2,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-202ENST00000348987 AIFM1O95831 613 aa17.08■□□□□ 0.33
SCARF1-202ENST00000348987 SLC9A5Q14940 896 aa17.08■□□□□ 0.33
SCARF1-202ENST00000348987 OR51A7Q8NH64 312 aa17.08■□□□□ 0.33
SCARF1-202ENST00000348987 MS4A6EQ96DS6 147 aa17.08■□□□□ 0.33
SCARF1-202ENST00000348987 PCBD2Q9H0N5 130 aa17.08■□□□□ 0.33
SCARF1-202ENST00000348987 TRAV27A0A087WT01 109 aa17.08■□□□□ 0.32
SCARF1-202ENST00000348987 CLEC3AO75596 197 aa17.08■□□□□ 0.32
SCARF1-202ENST00000348987 HNRNPA1P09651 372 aaKnown RBP eCLIP17.08■□□□□ 0.32
SCARF1-202ENST00000348987 HIST1H1TP22492 207 aaPredicted RBP17.08■□□□□ 0.32
SCARF1-202ENST00000348987 PRKAR1BP31321 381 aa17.08■□□□□ 0.32
SCARF1-202ENST00000348987 CD96P40200 585 aa17.08■□□□□ 0.32
SCARF1-202ENST00000348987 NAA10P41227 235 aaPredicted RBP17.08■□□□□ 0.32
SCARF1-202ENST00000348987 MC3RP41968 323 aa17.08■□□□□ 0.32
SCARF1-202ENST00000348987 HAAOP46952 286 aa17.08■□□□□ 0.32
SCARF1-202ENST00000348987 THAP6Q8TBB0 222 aa17.08■□□□□ 0.32
SCARF1-202ENST00000348987 DUSP19Q8WTR2 217 aa17.08■□□□□ 0.32
SCARF1-202ENST00000348987 PRDM7Q9NQW5 492 aa17.08■□□□□ 0.32
SCARF1-202ENST00000348987 WBP1LQ9NX94 342 aa17.08■□□□□ 0.32
SCARF1-202ENST00000348987 CLDND1Q9NY35 253 aa17.08■□□□□ 0.32
SCARF1-202ENST00000348987 SPHK1Q9NYA1 384 aa17.08■□□□□ 0.32
SCARF1-202ENST00000348987 ADAM29Q9UKF5 820 aa17.08■□□□□ 0.32
SCARF1-202ENST00000348987 RIIAD1A6NNX1 92 aa17.07■□□□□ 0.32
SCARF1-202ENST00000348987 SLC25A12O75746 678 aa17.07■□□□□ 0.32
SCARF1-202ENST00000348987 BDKRB2P30411 391 aa17.07■□□□□ 0.32
SCARF1-202ENST00000348987 ACTC1P68032 377 aa17.07■□□□□ 0.32
SCARF1-202ENST00000348987 ACTA1P68133 377 aa17.07■□□□□ 0.32
SCARF1-202ENST00000348987 MRPS10P82664 201 aaKnown RBP17.07■□□□□ 0.32
SCARF1-202ENST00000348987 FBXO46Q6PJ61 603 aaPredicted RBP17.07■□□□□ 0.32
SCARF1-202ENST00000348987 TMEM64Q6YI46 380 aa17.07■□□□□ 0.32
SCARF1-202ENST00000348987 CCDC36Q8IYA8 594 aa17.07■□□□□ 0.32
SCARF1-202ENST00000348987 OR9A2Q8NGT5 310 aa17.07■□□□□ 0.32
SCARF1-202ENST00000348987 HAVCR1Q96D42 359 aa17.07■□□□□ 0.32
SCARF1-202ENST00000348987 ARSGQ96EG1 525 aa17.07■□□□□ 0.32
SCARF1-202ENST00000348987 GSN-AS1Q9NRJ2 163 aa17.07■□□□□ 0.32
SCARF1-202ENST00000348987 SLC35A3Q9Y2D2 325 aa17.07■□□□□ 0.32
SCARF1-202ENST00000348987 NOSIPQ9Y314 301 aaKnown RBP17.07■□□□□ 0.32
SCARF1-202ENST00000348987 SMAD9O15198 467 aaKnown RBP17.07■□□□□ 0.32
SCARF1-202ENST00000348987 CA3P07451 260 aa17.07■□□□□ 0.32
SCARF1-202ENST00000348987 EN2P19622 333 aaPredicted RBP17.07■□□□□ 0.32
SCARF1-202ENST00000348987 HSD17B2P37059 387 aa17.07■□□□□ 0.32
SCARF1-202ENST00000348987 RAB28P51157 221 aa17.07■□□□□ 0.32
SCARF1-202ENST00000348987 PPIAP62937 165 aaKnown RBP17.07■□□□□ 0.32
SCARF1-202ENST00000348987 AGBL4Q5VU57 503 aa17.07■□□□□ 0.32
SCARF1-202ENST00000348987 PRAMEF8Q5VWM4 474 aa17.07■□□□□ 0.32
SCARF1-202ENST00000348987 PRAMEF7Q5VXH5 474 aa17.07■□□□□ 0.32
SCARF1-202ENST00000348987 JMJD6Q6NYC1 403 aaPredicted RBP17.07■□□□□ 0.32
SCARF1-202ENST00000348987 NUP43Q8NFH3 380 aa17.07■□□□□ 0.32
SCARF1-202ENST00000348987 OR4C6Q8NH72 309 aa17.07■□□□□ 0.32
SCARF1-202ENST00000348987 SNX33Q8WV41 574 aa17.07■□□□□ 0.32
SCARF1-202ENST00000348987 ZNF471Q9BX82 626 aaPredicted RBP17.07■□□□□ 0.32
SCARF1-202ENST00000348987 HDAC8Q9BY41 377 aa17.07■□□□□ 0.32
SCARF1-202ENST00000348987 KLF15Q9UIH9 416 aa17.07■□□□□ 0.32
SCARF1-202ENST00000348987 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.07■□□□□ 0.32
SCARF1-202ENST00000348987 V9GY05 133 aa17.07■□□□□ 0.32
SCARF1-202ENST00000348987 F5P12259 2224 aa17.06■□□□□ 0.32
SCARF1-202ENST00000348987 KANTRA0A1W2PQU2 76 aa17.06■□□□□ 0.32
SCARF1-202ENST00000348987 ANKRD61A6NGH8 418 aa17.06■□□□□ 0.32
SCARF1-202ENST00000348987 TMEM200CA6NKL6 621 aa17.06■□□□□ 0.32
SCARF1-202ENST00000348987 PPP1R3DO95685 299 aa17.06■□□□□ 0.32
SCARF1-202ENST00000348987 IRF4Q15306 451 aa17.06■□□□□ 0.32
SCARF1-202ENST00000348987 DHRS7BQ6IAN0 325 aaPredicted RBP17.06■□□□□ 0.32
SCARF1-202ENST00000348987 ABHD17CQ6PCB6 329 aa17.06■□□□□ 0.32
SCARF1-202ENST00000348987 TMPRSS9Q7Z410 1059 aa17.06■□□□□ 0.32
SCARF1-202ENST00000348987 SPAG16Q8N0X2 631 aa17.06■□□□□ 0.32
SCARF1-202ENST00000348987 OR51S1Q8NGJ8 323 aa17.06■□□□□ 0.32
SCARF1-202ENST00000348987 ZNF764Q96H86 408 aaPredicted RBP17.06■□□□□ 0.32
SCARF1-202ENST00000348987 FAM117AQ9C073 453 aa17.06■□□□□ 0.32
SCARF1-202ENST00000348987 IL21RQ9HBE5 538 aa17.06■□□□□ 0.32
SCARF1-202ENST00000348987 ASF1BQ9NVP2 202 aa17.06■□□□□ 0.32
SCARF1-202ENST00000348987 EPHA6Q9UF33 1036 aa17.06■□□□□ 0.32
SCARF1-202ENST00000348987 ZNF223Q9UK11 482 aaPredicted RBP17.06■□□□□ 0.32
SCARF1-202ENST00000348987 CENPVL1A0A0U1RR11 272 aa17.06■□□□□ 0.32
SCARF1-202ENST00000348987 IDSB3KWA1 339 aa17.06■□□□□ 0.32
SCARF1-202ENST00000348987 C1QTNF3-AMACRE9PGA6 284 aa17.06■□□□□ 0.32
SCARF1-202ENST00000348987 RBBP9O75884 186 aa17.06■□□□□ 0.32
SCARF1-202ENST00000348987 GKN3PP0CG01 181 aa17.06■□□□□ 0.32
SCARF1-202ENST00000348987 ITPKBP27987 946 aa17.06■□□□□ 0.32
SCARF1-202ENST00000348987 CAPZA2P47755 286 aa17.06■□□□□ 0.32
SCARF1-202ENST00000348987 PLA2G7Q13093 441 aa17.06■□□□□ 0.32
SCARF1-202ENST00000348987 MPPED2Q15777 294 aa17.06■□□□□ 0.32
SCARF1-202ENST00000348987 GLB1L2Q8IW92 636 aa17.06■□□□□ 0.32
SCARF1-202ENST00000348987 OR56A1Q8NGH5 318 aa17.06■□□□□ 0.32
SCARF1-202ENST00000348987 FGF13Q92913 245 aa17.06■□□□□ 0.32
SCARF1-202ENST00000348987 ZNF443Q9Y2A4 671 aaPredicted RBP17.06■□□□□ 0.32
SCARF1-202ENST00000348987 MDC1Q14676 2089 aaKnown RBP17.06■□□□□ 0.32
SCARF1-202ENST00000348987 MUC22E2RYF6 1773 aaPredicted RBP17.05■□□□□ 0.32
SCARF1-202ENST00000348987 A0A0D9SG52 128 aa17.05■□□□□ 0.32
SCARF1-202ENST00000348987 MEIS3P1A6NDR6 274 aa17.05■□□□□ 0.32
SCARF1-202ENST00000348987 PSMD9O00233 223 aa17.05■□□□□ 0.32
SCARF1-202ENST00000348987 RCBTB2O95199 551 aa17.05■□□□□ 0.32
SCARF1-202ENST00000348987 IFNA4P05014 189 aa17.05■□□□□ 0.32
SCARF1-202ENST00000348987 RAB40ALP0C0E4 278 aa17.05■□□□□ 0.32
SCARF1-202ENST00000348987 ZNF806P0C7X5 589 aa17.05■□□□□ 0.32
SCARF1-202ENST00000348987 FAUP35544 74 aaKnown RBP17.05■□□□□ 0.32
SCARF1-202ENST00000348987 BLOC1S1P78537 153 aa17.05■□□□□ 0.32
SCARF1-202ENST00000348987 RPL22L1Q6P5R6 122 aaKnown RBP17.05■□□□□ 0.32
SCARF1-202ENST00000348987 UQCC3Q6UW78 93 aa17.05■□□□□ 0.32
SCARF1-202ENST00000348987 UNQ9370/PRO34162Q6UXP9 181 aa17.05■□□□□ 0.32
SCARF1-202ENST00000348987 C7orf61Q8IZ16 206 aa17.05■□□□□ 0.32
SCARF1-202ENST00000348987 SHISA5Q8N114 240 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms