RNA–Protein interactions for RNA: ENST00000345734.7

ATG4A-202, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best) BASIC

Gene ATG4A, Length 2,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-202ENST00000345734 OR4K13Q8NH42 304 aa8.38□□□□□ -1.07
ATG4A-202ENST00000345734 MOSPD2Q8NHP6 518 aa8.38□□□□□ -1.07
ATG4A-202ENST00000345734 TM9SF4Q92544 642 aa8.38□□□□□ -1.07
ATG4A-202ENST00000345734 MR1Q95460 341 aa8.38□□□□□ -1.07
ATG4A-202ENST00000345734 KTI12Q96EK9 354 aaPredicted RBP8.38□□□□□ -1.07
ATG4A-202ENST00000345734 TRMT61AQ96FX7 289 aaKnown RBP8.38□□□□□ -1.07
ATG4A-202ENST00000345734 ASPNQ9BXN1 380 aa8.38□□□□□ -1.07
ATG4A-202ENST00000345734 SLIRPQ9GZT3 109 aaKnown RBP8.38□□□□□ -1.07
ATG4A-202ENST00000345734 FN3KQ9H479 309 aa8.38□□□□□ -1.07
ATG4A-202ENST00000345734 DIABLOQ9NR28 239 aa8.38□□□□□ -1.07
ATG4A-202ENST00000345734 CHRNA9Q9UGM1 479 aa8.38□□□□□ -1.07
ATG4A-202ENST00000345734 EXOSC1Q9Y3B2 195 aaKnown RBP8.38□□□□□ -1.07
ATG4A-202ENST00000345734 ZNF337Q9Y3M9 751 aa8.38□□□□□ -1.07
ATG4A-202ENST00000345734 IER3IP1Q9Y5U9 82 aa8.38□□□□□ -1.07
ATG4A-202ENST00000345734 TMEM129A0AVI4 362 aa8.37□□□□□ -1.07
ATG4A-202ENST00000345734 ZSCAN5BA6NJL1 495 aa8.37□□□□□ -1.07
ATG4A-202ENST00000345734 B4DXG7 233 aa8.37□□□□□ -1.07
ATG4A-202ENST00000345734 J3QRE1 110 aa8.37□□□□□ -1.07
ATG4A-202ENST00000345734 IMPA2O14732 288 aa8.37□□□□□ -1.07
ATG4A-202ENST00000345734 EIF4E2O60573 245 aaKnown RBP8.37□□□□□ -1.07
ATG4A-202ENST00000345734 IGHA1P01876 353 aa8.37□□□□□ -1.07
ATG4A-202ENST00000345734 S100A6P06703 90 aa8.37□□□□□ -1.07
ATG4A-202ENST00000345734 GP1BAP07359 652 aa8.37□□□□□ -1.07
ATG4A-202ENST00000345734 PEPDP12955 493 aa8.37□□□□□ -1.07
ATG4A-202ENST00000345734 HIST1H1CP16403 213 aaKnown RBP8.37□□□□□ -1.07
ATG4A-202ENST00000345734 ZNF3P17036 446 aa8.37□□□□□ -1.07
ATG4A-202ENST00000345734 UGT2B10P36537 528 aa8.37□□□□□ -1.07
ATG4A-202ENST00000345734 ATP6V1E1P36543 226 aa8.37□□□□□ -1.07
ATG4A-202ENST00000345734 RPL4P36578 427 aaKnown RBP8.37□□□□□ -1.07
ATG4A-202ENST00000345734 OPRL1P41146 370 aa8.37□□□□□ -1.07
ATG4A-202ENST00000345734 CRYBB2P43320 205 aa8.37□□□□□ -1.07
ATG4A-202ENST00000345734 CBX5P45973 191 aa8.37□□□□□ -1.07
ATG4A-202ENST00000345734 SLC6A8P48029 635 aa8.37□□□□□ -1.07
ATG4A-202ENST00000345734 BMXP51813 675 aa8.37□□□□□ -1.07
ATG4A-202ENST00000345734 SLC16A1P53985 500 aa8.37□□□□□ -1.07
ATG4A-202ENST00000345734 P2RX3P56373 397 aa8.37□□□□□ -1.07
ATG4A-202ENST00000345734 CLDN6P56747 220 aa8.37□□□□□ -1.07
ATG4A-202ENST00000345734 RPS7P62081 194 aaKnown RBP8.37□□□□□ -1.07
ATG4A-202ENST00000345734 C1DQ13901 141 aaKnown RBP8.37□□□□□ -1.07
ATG4A-202ENST00000345734 SF3B4Q15427 424 aaKnown RBP eCLIP8.37□□□□□ -1.072e-6■■■■■ 28.8
ATG4A-202ENST00000345734 ZNF74Q16587 644 aa8.37□□□□□ -1.07
ATG4A-202ENST00000345734 MOGQ16653 247 aa8.37□□□□□ -1.07
ATG4A-202ENST00000345734 ZNF791Q3KP31 576 aaPredicted RBP8.37□□□□□ -1.07
ATG4A-202ENST00000345734 BEND4Q6ZU67 534 aa8.37□□□□□ -1.07
ATG4A-202ENST00000345734 ADCK1Q86TW2 530 aa8.37□□□□□ -1.07
ATG4A-202ENST00000345734 GHDCQ8N2G8 530 aa8.37□□□□□ -1.07
ATG4A-202ENST00000345734 SLC15A4Q8N697 577 aa8.37□□□□□ -1.07
ATG4A-202ENST00000345734 ZNF485Q8NCK3 441 aa8.37□□□□□ -1.07
ATG4A-202ENST00000345734 SDR9C7Q8NEX9 313 aa8.37□□□□□ -1.07
ATG4A-202ENST00000345734 OR52E2Q8NGJ4 325 aa8.37□□□□□ -1.07
ATG4A-202ENST00000345734 OR5W2Q8NH69 310 aa8.37□□□□□ -1.07
ATG4A-202ENST00000345734 NUBPLQ8TB37 319 aa8.37□□□□□ -1.07
ATG4A-202ENST00000345734 DUSP19Q8WTR2 217 aa8.37□□□□□ -1.07
ATG4A-202ENST00000345734 SMAP2Q8WU79 429 aaPredicted RBP8.37□□□□□ -1.07
ATG4A-202ENST00000345734 RELTQ969Z4 430 aa8.37□□□□□ -1.07
ATG4A-202ENST00000345734 SECISBP2Q96T21 854 aaKnown RBP8.37□□□□□ -1.07
ATG4A-202ENST00000345734 TMEM43Q9BTV4 400 aa8.37□□□□□ -1.07
ATG4A-202ENST00000345734 ULBP3Q9BZM4 244 aa8.37□□□□□ -1.07
ATG4A-202ENST00000345734 SLC19A3Q9BZV2 496 aa8.37□□□□□ -1.07
ATG4A-202ENST00000345734 FBXO8Q9NRD0 319 aa8.37□□□□□ -1.07
ATG4A-202ENST00000345734 SLC39A1Q9NY26 324 aa8.37□□□□□ -1.07
ATG4A-202ENST00000345734 STMN3Q9NZ72 180 aa8.37□□□□□ -1.07
ATG4A-202ENST00000345734 TNFRSF10DQ9UBN6 386 aa8.37□□□□□ -1.07
ATG4A-202ENST00000345734 BAIAP2Q9UQB8 552 aa8.37□□□□□ -1.07
ATG4A-202ENST00000345734 SPIN1Q9Y657 262 aaPredicted RBP8.37□□□□□ -1.07
ATG4A-202ENST00000345734 PMS2P1A4D2B8 440 aa8.36□□□□□ -1.07
ATG4A-202ENST00000345734 C4orf47A7E2U8 309 aa8.36□□□□□ -1.07
ATG4A-202ENST00000345734 BLOC1S5-TXNDC5H3BN57 136 aa8.36□□□□□ -1.07
ATG4A-202ENST00000345734 CDC40O60508 579 aaKnown RBP eCLIP8.36□□□□□ -1.07
ATG4A-202ENST00000345734 LALBAP00709 142 aa8.36□□□□□ -1.07
ATG4A-202ENST00000345734 UMODP07911 640 aa8.36□□□□□ -1.07
ATG4A-202ENST00000345734 CELA2AP08217 269 aa8.36□□□□□ -1.07
ATG4A-202ENST00000345734 MRPL3P09001 348 aaKnown RBP8.36□□□□□ -1.07
ATG4A-202ENST00000345734 SLC2A5P22732 501 aa8.36□□□□□ -1.07
ATG4A-202ENST00000345734 LORP23490 312 aaPredicted RBP8.36□□□□□ -1.07
ATG4A-202ENST00000345734 AQP2P41181 271 aa8.36□□□□□ -1.07
ATG4A-202ENST00000345734 SERPINB10P48595 397 aa8.36□□□□□ -1.07
ATG4A-202ENST00000345734 RPS4XP62701 263 aaKnown RBP8.36□□□□□ -1.07
ATG4A-202ENST00000345734 ERVK-25P63136 954 aa8.36□□□□□ -1.07
ATG4A-202ENST00000345734 CBFBQ13951 182 aa8.36□□□□□ -1.07
ATG4A-202ENST00000345734 SF3A2Q15428 464 aaKnown RBP8.36□□□□□ -1.07
ATG4A-202ENST00000345734 AGAP7PQ5VUJ5 663 aa8.36□□□□□ -1.07
ATG4A-202ENST00000345734 C1QL3Q5VWW1 255 aa8.36□□□□□ -1.07
ATG4A-202ENST00000345734 BICRALQ6AI39 1079 aa8.36□□□□□ -1.07
ATG4A-202ENST00000345734 ARHGAP11AQ6P4F7 1023 aa8.36□□□□□ -1.07
ATG4A-202ENST00000345734 PHC2Q8IXK0 858 aa8.36□□□□□ -1.07
ATG4A-202ENST00000345734 KMT2EQ8IZD2 1858 aa8.36□□□□□ -1.07
ATG4A-202ENST00000345734 TMEM99Q8N816 258 aa8.36□□□□□ -1.07
ATG4A-202ENST00000345734 ZFP41Q8N8Y5 198 aa8.36□□□□□ -1.07
ATG4A-202ENST00000345734 OR9Q1Q8NGQ5 310 aa8.36□□□□□ -1.07
ATG4A-202ENST00000345734 GPR119Q8TDV5 335 aa8.36□□□□□ -1.07
ATG4A-202ENST00000345734 HGDQ93099 445 aa8.36□□□□□ -1.07
ATG4A-202ENST00000345734 TAAR8Q969N4 342 aa8.36□□□□□ -1.07
ATG4A-202ENST00000345734 TRIM63Q969Q1 353 aa8.36□□□□□ -1.07
ATG4A-202ENST00000345734 RASD2Q96D21 266 aa8.36□□□□□ -1.07
ATG4A-202ENST00000345734 RCC1LQ96I51 464 aaKnown RBP8.36□□□□□ -1.07
ATG4A-202ENST00000345734 CCNL2Q96S94 520 aaPredicted RBP8.36□□□□□ -1.07
ATG4A-202ENST00000345734 TBX5Q99593 518 aa8.36□□□□□ -1.07
ATG4A-202ENST00000345734 TEAD3Q99594 435 aa8.36□□□□□ -1.07
ATG4A-202ENST00000345734 RACGAP1Q9H0H5 632 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms