RNA–Protein interactions for RNA: ENST00000344824.10

TPM4-202, Transcript of tropomyosin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TPM4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-202ENST00000344824 LINC00471Q8N535 108 aa12.3□□□□□ -0.44
TPM4-202ENST00000344824 GNPDA2Q8TDQ7 276 aa12.3□□□□□ -0.44
TPM4-202ENST00000344824 ROBO4Q8WZ75 1007 aa12.3□□□□□ -0.44
TPM4-202ENST00000344824 SRXN1Q9BYN0 137 aa12.3□□□□□ -0.44
TPM4-202ENST00000344824 RNF122Q9H9V4 155 aa12.3□□□□□ -0.44
TPM4-202ENST00000344824 C12orf10Q9HB07 376 aa12.3□□□□□ -0.44
TPM4-202ENST00000344824 SLC24A3Q9HC58 644 aa12.3□□□□□ -0.44
TPM4-202ENST00000344824 MEPEQ9NQ76 525 aaPredicted RBP12.3□□□□□ -0.44
TPM4-202ENST00000344824 SERINC1Q9NRX5 453 aa12.3□□□□□ -0.44
TPM4-202ENST00000344824 CRIM1Q9NZV1 1036 aa12.3□□□□□ -0.44
TPM4-202ENST00000344824 KCNN3Q9UGI6 736 aa12.3□□□□□ -0.44
TPM4-202ENST00000344824 CHRNA9Q9UGM1 479 aa12.3□□□□□ -0.44
TPM4-202ENST00000344824 PROCRQ9UNN8 238 aa12.3□□□□□ -0.44
TPM4-202ENST00000344824 MGAT4BQ9UQ53 548 aa12.3□□□□□ -0.44
TPM4-202ENST00000344824 ORC6Q9Y5N6 252 aa12.3□□□□□ -0.44
TPM4-202ENST00000344824 MYO9AB2RTY4 2548 aa12.3□□□□□ -0.44
TPM4-202ENST00000344824 IGHV3-15A0A0B4J1V0 119 aa12.29□□□□□ -0.44
TPM4-202ENST00000344824 ARRDC5A6NEK1 342 aa12.29□□□□□ -0.44
TPM4-202ENST00000344824 TUBAL3A6NHL2 446 aa12.29□□□□□ -0.44
TPM4-202ENST00000344824 LRRN3E7EW58 273 aa12.29□□□□□ -0.44
TPM4-202ENST00000344824 SNAP29O95721 258 aa12.29□□□□□ -0.44
TPM4-202ENST00000344824 ALPLP05186 524 aa12.29□□□□□ -0.44
TPM4-202ENST00000344824 CRHP06850 196 aa12.29□□□□□ -0.44
TPM4-202ENST00000344824 MAKP20794 623 aa12.29□□□□□ -0.44
TPM4-202ENST00000344824 RPS5P46782 204 aaKnown RBP12.29□□□□□ -0.44
TPM4-202ENST00000344824 OMPP47874 163 aa12.29□□□□□ -0.44
TPM4-202ENST00000344824 EGR4Q05215 589 aa12.29□□□□□ -0.44
TPM4-202ENST00000344824 ZNF239Q16600 458 aaKnown RBP12.29□□□□□ -0.44
TPM4-202ENST00000344824 FBXL19-AS1Q494R0 122 aa12.29□□□□□ -0.44
TPM4-202ENST00000344824 SLC25A53Q5H9E4 307 aa12.29□□□□□ -0.44
TPM4-202ENST00000344824 FAHD1Q6P587 224 aa12.29□□□□□ -0.44
TPM4-202ENST00000344824 BTLAQ7Z6A9 289 aa12.29□□□□□ -0.44
TPM4-202ENST00000344824 CDK20Q8IZL9 346 aa12.29□□□□□ -0.44
TPM4-202ENST00000344824 RNF113BQ8IZP6 322 aaKnown RBP12.29□□□□□ -0.44
TPM4-202ENST00000344824 PACRGLQ8N7B6 248 aa12.29□□□□□ -0.44
TPM4-202ENST00000344824 ACBD4Q8NC06 268 aa12.29□□□□□ -0.44
TPM4-202ENST00000344824 LINC01560Q8TB33 94 aa12.29□□□□□ -0.44
TPM4-202ENST00000344824 CPNE4Q96A23 557 aaPredicted RBP12.29□□□□□ -0.44
TPM4-202ENST00000344824 BPIFA2Q96DR5 249 aa12.29□□□□□ -0.44
TPM4-202ENST00000344824 KTI12Q96EK9 354 aaPredicted RBP12.29□□□□□ -0.44
TPM4-202ENST00000344824 SGTBQ96EQ0 304 aa12.29□□□□□ -0.44
TPM4-202ENST00000344824 C14orf79Q96F83 325 aa12.29□□□□□ -0.44
TPM4-202ENST00000344824 LURAP1Q96LR2 239 aa12.29□□□□□ -0.44
TPM4-202ENST00000344824 GPA33Q99795 319 aa12.29□□□□□ -0.44
TPM4-202ENST00000344824 PSD2Q9BQI7 771 aa12.29□□□□□ -0.44
TPM4-202ENST00000344824 TMEM43Q9BTV4 400 aa12.29□□□□□ -0.44
TPM4-202ENST00000344824 ZNF426Q9BUY5 554 aa12.29□□□□□ -0.44
TPM4-202ENST00000344824 RIBC2Q9H4K1 309 aa12.29□□□□□ -0.44
TPM4-202ENST00000344824 C12orf49Q9H741 205 aa12.29□□□□□ -0.44
TPM4-202ENST00000344824 TIGARQ9NQ88 270 aa12.29□□□□□ -0.44
TPM4-202ENST00000344824 PAPOLBQ9NRJ5 636 aaKnown RBP12.29□□□□□ -0.44
TPM4-202ENST00000344824 USE1Q9NZ43 259 aa12.29□□□□□ -0.44
TPM4-202ENST00000344824 TMEFF2Q9UIK5 374 aaPredicted RBP12.29□□□□□ -0.44
TPM4-202ENST00000344824 SPIN1Q9Y657 262 aaPredicted RBP12.29□□□□□ -0.44
TPM4-202ENST00000344824 CCDC168Q8NDH2 2452 aa12.29□□□□□ -0.44
TPM4-202ENST00000344824 HRNRQ86YZ3 2850 aaPredicted RBP12.28□□□□□ -0.44
TPM4-202ENST00000344824 EFCAB9A8MZ26 197 aa12.28□□□□□ -0.44
TPM4-202ENST00000344824 ETV2O00321 342 aaPredicted RBP12.28□□□□□ -0.44
TPM4-202ENST00000344824 SOX14O95416 240 aa12.28□□□□□ -0.44
TPM4-202ENST00000344824 CH25HO95992 272 aa12.28□□□□□ -0.44
TPM4-202ENST00000344824 HPRP00739 348 aa12.28□□□□□ -0.44
TPM4-202ENST00000344824 ADAP00813 363 aa12.28□□□□□ -0.44
TPM4-202ENST00000344824 SAGP10523 405 aaPredicted RBP12.28□□□□□ -0.44
TPM4-202ENST00000344824 PEX19P40855 299 aa12.28□□□□□ -0.44
TPM4-202ENST00000344824 KIR2DL2P43627 348 aaPredicted RBP12.28□□□□□ -0.44
TPM4-202ENST00000344824 KRTAP10-9P60411 292 aa12.28□□□□□ -0.44
TPM4-202ENST00000344824 PRKCDQ05655 676 aa12.28□□□□□ -0.44
TPM4-202ENST00000344824 KDM4DQ6B0I6 523 aa12.28□□□□□ -0.44
TPM4-202ENST00000344824 C1orf94Q6P1W5 598 aa12.28□□□□□ -0.44
TPM4-202ENST00000344824 KLHL17Q6TDP4 642 aa12.28□□□□□ -0.44
TPM4-202ENST00000344824 FAM214BQ7L5A3 538 aa12.28□□□□□ -0.44
TPM4-202ENST00000344824 SLC25A36Q96CQ1 311 aa12.28□□□□□ -0.44
TPM4-202ENST00000344824 DDIT4LQ96D03 193 aa12.28□□□□□ -0.44
TPM4-202ENST00000344824 STARD4Q96DR4 205 aa12.28□□□□□ -0.44
TPM4-202ENST00000344824 TOR3AQ9H497 397 aa12.28□□□□□ -0.44
TPM4-202ENST00000344824 MCCC2Q9HCC0 563 aa12.28□□□□□ -0.44
TPM4-202ENST00000344824 C8orf4Q9NR00 106 aa12.28□□□□□ -0.44
TPM4-202ENST00000344824 JKAMPQ9P055 326 aa12.28□□□□□ -0.44
TPM4-202ENST00000344824 TMEM5Q9Y2B1 443 aa12.28□□□□□ -0.44
TPM4-202ENST00000344824 POFUT2Q9Y2G5 429 aa12.28□□□□□ -0.44
TPM4-202ENST00000344824 SPG11Q96JI7 2443 aa12.28□□□□□ -0.44
TPM4-202ENST00000344824 ABCA4P78363 2273 aa12.28□□□□□ -0.44
TPM4-202ENST00000344824 A8MVM7 634 aa12.28□□□□□ -0.44
TPM4-202ENST00000344824 CDC42EP2O14613 210 aa12.28□□□□□ -0.44
TPM4-202ENST00000344824 MSTNO14793 375 aa12.28□□□□□ -0.44
TPM4-202ENST00000344824 AHSA1O95433 338 aa12.28□□□□□ -0.44
TPM4-202ENST00000344824 POU1F1P28069 291 aa12.28□□□□□ -0.44
TPM4-202ENST00000344824 RAD23AP54725 363 aa12.28□□□□□ -0.44
TPM4-202ENST00000344824 SYT14P1Q58G82 188 aa12.28□□□□□ -0.44
TPM4-202ENST00000344824 EEF1A1P5Q5VTE0 462 aa12.28□□□□□ -0.44
TPM4-202ENST00000344824 C1orf140Q5VVS0 124 aa12.28□□□□□ -0.44
TPM4-202ENST00000344824 FCRLAQ7L513 359 aa12.28□□□□□ -0.44
TPM4-202ENST00000344824 OR13C2Q8NGS9 318 aa12.28□□□□□ -0.44
TPM4-202ENST00000344824 ABHD3Q8WU67 409 aa12.28□□□□□ -0.44
TPM4-202ENST00000344824 CYGBQ8WWM9 190 aa12.28□□□□□ -0.44
TPM4-202ENST00000344824 TAAR8Q969N4 342 aa12.28□□□□□ -0.44
TPM4-202ENST00000344824 GMPPAQ96IJ6 420 aaPredicted RBP12.28□□□□□ -0.44
TPM4-202ENST00000344824 DGCR6LQ9BY27 220 aa12.28□□□□□ -0.44
TPM4-202ENST00000344824 SMPD3Q9NY59 655 aaPredicted RBP12.28□□□□□ -0.44
TPM4-202ENST00000344824 CSMD2Q7Z408 3487 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms