RNA–Protein interactions for RNA: ENST00000343524.9

ATG4A-201, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 2

Gene ATG4A, Length 1,941 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-201ENST00000343524 SOCS6O14544 535 aa7.47□□□□□ -1.21
ATG4A-201ENST00000343524 PRAMEF4O60810 478 aa7.47□□□□□ -1.21
ATG4A-201ENST00000343524 CTNSO60931 367 aa7.47□□□□□ -1.21
ATG4A-201ENST00000343524 ZNF821O75541 412 aaPredicted RBP7.47□□□□□ -1.21
ATG4A-201ENST00000343524 CRTAPO75718 401 aaPredicted RBP7.47□□□□□ -1.21
ATG4A-201ENST00000343524 LY86O95711 162 aa7.47□□□□□ -1.21
ATG4A-201ENST00000343524 AK1P00568 194 aa7.47□□□□□ -1.21
ATG4A-201ENST00000343524 IGLV3-27P01718 113 aa7.47□□□□□ -1.21
ATG4A-201ENST00000343524 MBP02144 154 aa7.47□□□□□ -1.21
ATG4A-201ENST00000343524 CD14P08571 375 aa7.47□□□□□ -1.21
ATG4A-201ENST00000343524 COX5BP10606 129 aa7.47□□□□□ -1.21
ATG4A-201ENST00000343524 HLA-GP17693 338 aa7.47□□□□□ -1.21
ATG4A-201ENST00000343524 MAOAP21397 527 aa7.47□□□□□ -1.21
ATG4A-201ENST00000343524 LORP23490 312 aaPredicted RBP7.47□□□□□ -1.21
ATG4A-201ENST00000343524 DPP4P27487 766 aa7.47□□□□□ -1.21
ATG4A-201ENST00000343524 CD34P28906 385 aa7.47□□□□□ -1.21
ATG4A-201ENST00000343524 MAS1LP35410 378 aa7.47□□□□□ -1.21
ATG4A-201ENST00000343524 AHRP35869 848 aa7.47□□□□□ -1.21
ATG4A-201ENST00000343524 OMPP47874 163 aa7.47□□□□□ -1.21
ATG4A-201ENST00000343524 ID4P47928 161 aa7.47□□□□□ -1.21
ATG4A-201ENST00000343524 PPP2CBP62714 309 aa7.47□□□□□ -1.21
ATG4A-201ENST00000343524 PPP2CAP67775 309 aa7.47□□□□□ -1.21
ATG4A-201ENST00000343524 TLE2Q04725 743 aa7.47□□□□□ -1.21
ATG4A-201ENST00000343524 EFEMP1Q12805 493 aa7.47□□□□□ -1.21
ATG4A-201ENST00000343524 C2orf68Q2NKX9 166 aa7.47□□□□□ -1.21
ATG4A-201ENST00000343524 PYY3Q5JQD4 70 aa7.47□□□□□ -1.21
ATG4A-201ENST00000343524 MARCH8Q5T0T0 291 aa7.47□□□□□ -1.21
ATG4A-201ENST00000343524 PRAMEF9Q5VWM5 478 aa7.47□□□□□ -1.21
ATG4A-201ENST00000343524 MTFR2Q6P444 385 aa7.47□□□□□ -1.21
ATG4A-201ENST00000343524 RBM45Q8IUH3 476 aaKnown RBP7.47□□□□□ -1.21
ATG4A-201ENST00000343524 RNF175Q8N4F7 328 aa7.47□□□□□ -1.21
ATG4A-201ENST00000343524 COMMD1Q8N668 190 aa7.47□□□□□ -1.21
ATG4A-201ENST00000343524 TMEM99Q8N816 258 aa7.47□□□□□ -1.21
ATG4A-201ENST00000343524 BOLLQ8N9W6 283 aaKnown RBP7.47□□□□□ -1.21
ATG4A-201ENST00000343524 CHST14Q8NCH0 376 aa7.47□□□□□ -1.21
ATG4A-201ENST00000343524 OR4C16Q8NGL9 310 aa7.47□□□□□ -1.21
ATG4A-201ENST00000343524 SNX33Q8WV41 574 aa7.47□□□□□ -1.21
ATG4A-201ENST00000343524 HMGB4Q8WW32 186 aa7.47□□□□□ -1.21
ATG4A-201ENST00000343524 LINC01599Q8WXQ3 324 aa7.47□□□□□ -1.21
ATG4A-201ENST00000343524 ZNF707Q96C28 371 aaPredicted RBP7.47□□□□□ -1.21
ATG4A-201ENST00000343524 ZNF764Q96H86 408 aaPredicted RBP7.47□□□□□ -1.21
ATG4A-201ENST00000343524 FAM46AQ96IP4 442 aaKnown RBP7.47□□□□□ -1.21
ATG4A-201ENST00000343524 NOL4LQ96MY1 436 aaPredicted RBP7.47□□□□□ -1.21
ATG4A-201ENST00000343524 OR5B2Q96R09 309 aa7.47□□□□□ -1.21
ATG4A-201ENST00000343524 GPA33Q99795 319 aa7.47□□□□□ -1.21
ATG4A-201ENST00000343524 SPON2Q9BUD6 331 aa7.47□□□□□ -1.21
ATG4A-201ENST00000343524 DUSP15Q9H1R2 295 aaPredicted RBP7.47□□□□□ -1.21
ATG4A-201ENST00000343524 SYT4Q9H2B2 425 aa7.47□□□□□ -1.21
ATG4A-201ENST00000343524 NKX2-4Q9H2Z4 354 aa7.47□□□□□ -1.21
ATG4A-201ENST00000343524 PRDM13Q9H4Q3 707 aa7.47□□□□□ -1.21
ATG4A-201ENST00000343524 CXorf36Q9H7Y0 433 aa7.47□□□□□ -1.21
ATG4A-201ENST00000343524 BCL2L10Q9HD36 194 aa7.47□□□□□ -1.21
ATG4A-201ENST00000343524 NOD1Q9Y239 953 aa7.47□□□□□ -1.21
ATG4A-201ENST00000343524 SLC27A6Q9Y2P4 619 aa7.47□□□□□ -1.21
ATG4A-201ENST00000343524 PRG3Q9Y2Y8 225 aaPredicted RBP7.47□□□□□ -1.21
ATG4A-201ENST00000343524 TIMM10BQ9Y5J6 103 aa7.47□□□□□ -1.21
ATG4A-201ENST00000343524 TIMM13Q9Y5L4 95 aaPredicted RBP7.47□□□□□ -1.21
ATG4A-201ENST00000343524 MTCH2Q9Y6C9 303 aa7.47□□□□□ -1.21
ATG4A-201ENST00000343524 PIAS3Q9Y6X2 628 aa7.47□□□□□ -1.21
ATG4A-201ENST00000343524 CHD5Q8TDI0 1954 aa7.47□□□□□ -1.21
ATG4A-201ENST00000343524 TEX13DA0A0J9YY54 714 aaPredicted RBP7.46□□□□□ -1.21
ATG4A-201ENST00000343524 J3QLW9 94 aa7.46□□□□□ -1.21
ATG4A-201ENST00000343524 GAPDHSO14556 408 aaPredicted RBP7.46□□□□□ -1.21
ATG4A-201ENST00000343524 EIF1AYO14602 144 aaKnown RBP7.46□□□□□ -1.21
ATG4A-201ENST00000343524 MAGEB4O15481 346 aaPredicted RBP7.46□□□□□ -1.21
ATG4A-201ENST00000343524 OGG1O15527 345 aa7.46□□□□□ -1.21
ATG4A-201ENST00000343524 P2RX6O15547 441 aa7.46□□□□□ -1.21
ATG4A-201ENST00000343524 FBXO24O75426 580 aa7.46□□□□□ -1.21
ATG4A-201ENST00000343524 GLSO94925 669 aaPredicted RBP7.46□□□□□ -1.21
ATG4A-201ENST00000343524 F12P00748 615 aaPredicted RBP7.46□□□□□ -1.21
ATG4A-201ENST00000343524 F11P03951 625 aa7.46□□□□□ -1.21
ATG4A-201ENST00000343524 ITGB2P05107 769 aa7.46□□□□□ -1.21
ATG4A-201ENST00000343524 RHOCP08134 193 aa7.46□□□□□ -1.21
ATG4A-201ENST00000343524 OR4E1P0C645 316 aa7.46□□□□□ -1.21
ATG4A-201ENST00000343524 ZNF286BP0CG31 522 aa7.46□□□□□ -1.21
ATG4A-201ENST00000343524 RD3LP0DJH9 198 aa7.46□□□□□ -1.21
ATG4A-201ENST00000343524 NR2F1P10589 423 aa7.46□□□□□ -1.21
ATG4A-201ENST00000343524 ZNF19P17023 458 aa7.46□□□□□ -1.21
ATG4A-201ENST00000343524 SDHBP21912 280 aa7.46□□□□□ -1.21
ATG4A-201ENST00000343524 CRABP1P29762 137 aa7.46□□□□□ -1.21
ATG4A-201ENST00000343524 AVPR2P30518 371 aa7.46□□□□□ -1.21
ATG4A-201ENST00000343524 CTSOP43234 321 aaPredicted RBP7.46□□□□□ -1.21
ATG4A-201ENST00000343524 MAPK8P45983 427 aa7.46□□□□□ -1.21
ATG4A-201ENST00000343524 EIF1AXP47813 144 aaKnown RBP7.46□□□□□ -1.21
ATG4A-201ENST00000343524 PCP4P48539 62 aa7.46□□□□□ -1.21
ATG4A-201ENST00000343524 EPHB3P54753 998 aa7.46□□□□□ -1.21
ATG4A-201ENST00000343524 DVL1P1P54792 670 aaPredicted RBP7.46□□□□□ -1.21
ATG4A-201ENST00000343524 NUTF2P61970 127 aaKnown RBP7.46□□□□□ -1.21
ATG4A-201ENST00000343524 RPS13P62277 151 aaKnown RBP7.46□□□□□ -1.21
ATG4A-201ENST00000343524 CDK5R1Q15078 307 aa7.46□□□□□ -1.21
ATG4A-201ENST00000343524 DHCR24Q15392 516 aa7.46□□□□□ -1.21
ATG4A-201ENST00000343524 RPE65Q16518 533 aa7.46□□□□□ -1.21
ATG4A-201ENST00000343524 ALG11Q2TAA5 492 aa7.46□□□□□ -1.21
ATG4A-201ENST00000343524 RNASE10Q5GAN6 216 aaKnown RBP7.46□□□□□ -1.21
ATG4A-201ENST00000343524 KRBOX4Q5JUW0 171 aa7.46□□□□□ -1.21
ATG4A-201ENST00000343524 LY6G6FQ5SQ64 297 aa7.46□□□□□ -1.21
ATG4A-201ENST00000343524 PRAMEF17Q5VTA0 474 aa7.46□□□□□ -1.21
ATG4A-201ENST00000343524 RPL22L1Q6P5R6 122 aaKnown RBP7.46□□□□□ -1.21
ATG4A-201ENST00000343524 TAS1R1Q7RTX1 841 aa7.46□□□□□ -1.21
ATG4A-201ENST00000343524 TECPR1Q7Z6L1 1165 aa7.46□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms