RNA–Protein interactions for RNA: ENST00000343508.7

CSMD3-203, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 13,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-203ENST00000343508 C3orf33Q6P1S2 294 aa4.43□□□□□ -1.7
CSMD3-203ENST00000343508 KCNRGQ8N5I3 272 aa4.43□□□□□ -1.7
CSMD3-203ENST00000343508 SLC6A17Q9H1V8 727 aa4.43□□□□□ -1.7
CSMD3-203ENST00000343508 OPA3Q9H6K4 179 aa4.43□□□□□ -1.7
CSMD3-203ENST00000343508 ZNF275Q9NSD4 429 aaPredicted RBP4.43□□□□□ -1.7
CSMD3-203ENST00000343508 ENTPD2Q9Y5L3 495 aa4.43□□□□□ -1.7
CSMD3-203ENST00000343508 CHD5Q8TDI0 1954 aa4.43□□□□□ -1.7
CSMD3-203ENST00000343508 MGAMO43451 1857 aa4.43□□□□□ -1.7
CSMD3-203ENST00000343508 SLC5A10A0PJK1 596 aa4.43□□□□□ -1.7
CSMD3-203ENST00000343508 IGLON5A6NGN9 336 aa4.43□□□□□ -1.7
CSMD3-203ENST00000343508 TUBG1P23258 451 aa4.43□□□□□ -1.7
CSMD3-203ENST00000343508 CPT2P23786 658 aa4.43□□□□□ -1.7
CSMD3-203ENST00000343508 MAGEB1P43366 347 aa4.43□□□□□ -1.7
CSMD3-203ENST00000343508 ZNF84P51523 738 aa4.43□□□□□ -1.7
CSMD3-203ENST00000343508 PDX1P52945 283 aa4.43□□□□□ -1.7
CSMD3-203ENST00000343508 OC90Q02509 493 aaPredicted RBP4.43□□□□□ -1.7
CSMD3-203ENST00000343508 ACSM1Q08AH1 577 aa4.43□□□□□ -1.7
CSMD3-203ENST00000343508 SLC22A25Q6T423 547 aa4.43□□□□□ -1.7
CSMD3-203ENST00000343508 ZNF695Q8IW36 515 aa4.43□□□□□ -1.7
CSMD3-203ENST00000343508 OR4Q3Q8NH05 313 aa4.43□□□□□ -1.7
CSMD3-203ENST00000343508 SEC22AQ96IW7 307 aa4.43□□□□□ -1.7
CSMD3-203ENST00000343508 CASD1Q96PB1 797 aa4.43□□□□□ -1.7
CSMD3-203ENST00000343508 SGPP1Q9BX95 441 aa4.43□□□□□ -1.7
CSMD3-203ENST00000343508 SIRT5Q9NXA8 310 aa4.43□□□□□ -1.7
CSMD3-203ENST00000343508 CXorf51AA0A1B0GTR3 108 aa4.43□□□□□ -1.7
CSMD3-203ENST00000343508 SLC34A2O95436 690 aa4.43□□□□□ -1.7
CSMD3-203ENST00000343508 DIRAS3O95661 229 aa4.43□□□□□ -1.7
CSMD3-203ENST00000343508 TIMP2P16035 220 aa4.43□□□□□ -1.7
CSMD3-203ENST00000343508 PXNP49023 591 aaPredicted RBP4.43□□□□□ -1.7
CSMD3-203ENST00000343508 HOXC5Q00444 222 aa4.43□□□□□ -1.7
CSMD3-203ENST00000343508 SERTAD2Q14140 314 aa4.43□□□□□ -1.7
CSMD3-203ENST00000343508 C9orf62Q8N4C0 152 aa4.43□□□□□ -1.7
CSMD3-203ENST00000343508 OR56B1Q8NGI3 324 aa4.43□□□□□ -1.7
CSMD3-203ENST00000343508 OR52E1Q8NGJ3 308 aa4.43□□□□□ -1.7
CSMD3-203ENST00000343508 OR13C2Q8NGS9 318 aa4.43□□□□□ -1.7
CSMD3-203ENST00000343508 TRIP12Q14669 1992 aaPredicted RBP4.42□□□□□ -1.7
CSMD3-203ENST00000343508 THEGLP0DJG4 465 aa4.42□□□□□ -1.7
CSMD3-203ENST00000343508 CTSOP43234 321 aaPredicted RBP4.42□□□□□ -1.7
CSMD3-203ENST00000343508 ELOCQ15369 112 aa4.42□□□□□ -1.7
CSMD3-203ENST00000343508 ELFN2Q5R3F8 820 aa4.42□□□□□ -1.7
CSMD3-203ENST00000343508 SLC25A30Q5SVS4 291 aa4.42□□□□□ -1.7
CSMD3-203ENST00000343508 OR52H1Q8NGJ2 320 aa4.42□□□□□ -1.7
CSMD3-203ENST00000343508 BTF3L4Q96K17 158 aa4.42□□□□□ -1.7
CSMD3-203ENST00000343508 PTCHD1Q96NR3 888 aa4.42□□□□□ -1.7
CSMD3-203ENST00000343508 PLEKHJ1Q9NW61 149 aa4.42□□□□□ -1.7
CSMD3-203ENST00000343508 GBF1Q92538 1859 aa4.42□□□□□ -1.7
CSMD3-203ENST00000343508 LRIT2A6NDA9 550 aa4.42□□□□□ -1.7
CSMD3-203ENST00000343508 MYADML2A6NDP7 307 aa4.42□□□□□ -1.7
CSMD3-203ENST00000343508 ZNF254O75437 659 aa4.42□□□□□ -1.7
CSMD3-203ENST00000343508 RHOP08100 348 aa4.42□□□□□ -1.7
CSMD3-203ENST00000343508 NAGAP17050 411 aa4.42□□□□□ -1.7
CSMD3-203ENST00000343508 TBPP20226 339 aa4.42□□□□□ -1.7
CSMD3-203ENST00000343508 DSC1Q08554 894 aa4.42□□□□□ -1.7
CSMD3-203ENST00000343508 EIF2S3LQ2VIR3 472 aaKnown RBP4.42□□□□□ -1.7
CSMD3-203ENST00000343508 GLYR1Q49A26 553 aaPredicted RBP4.42□□□□□ -1.7
CSMD3-203ENST00000343508 OR1J2Q8NGS2 313 aa4.42□□□□□ -1.7
CSMD3-203ENST00000343508 PFN4Q8NHR9 129 aa4.42□□□□□ -1.7
CSMD3-203ENST00000343508 SPTSSAQ969W0 71 aa4.42□□□□□ -1.7
CSMD3-203ENST00000343508 MYEF2Q9P2K5 600 aaKnown RBP4.42□□□□□ -1.7
CSMD3-203ENST00000343508 WISP3O95389 354 aaPredicted RBP4.42□□□□□ -1.7
CSMD3-203ENST00000343508 TLE3Q04726 772 aa4.42□□□□□ -1.7
CSMD3-203ENST00000343508 ST3GAL2Q16842 350 aa4.42□□□□□ -1.7
CSMD3-203ENST00000343508 TCEAL8Q8IYN2 117 aa4.42□□□□□ -1.7
CSMD3-203ENST00000343508 LFNGQ8NES3 379 aa4.42□□□□□ -1.7
CSMD3-203ENST00000343508 TIMM29Q9BSF4 260 aa4.42□□□□□ -1.7
CSMD3-203ENST00000343508 SAGE1Q9NXZ1 904 aa4.42□□□□□ -1.7
CSMD3-203ENST00000343508 YARS2Q9Y2Z4 477 aaKnown RBP4.42□□□□□ -1.7
CSMD3-203ENST00000343508 KPTNQ9Y664 436 aa4.42□□□□□ -1.7
CSMD3-203ENST00000343508 LCTP09848 1927 aa4.42□□□□□ -1.7
CSMD3-203ENST00000343508 SLC33A1O00400 549 aaPredicted RBP4.42□□□□□ -1.7
CSMD3-203ENST00000343508 CLDN6P56747 220 aa4.42□□□□□ -1.7
CSMD3-203ENST00000343508 ZNF266Q14584 549 aa4.42□□□□□ -1.7
CSMD3-203ENST00000343508 RSU1Q15404 277 aa4.42□□□□□ -1.7
CSMD3-203ENST00000343508 MANEAQ5SRI9 462 aa4.42□□□□□ -1.7
CSMD3-203ENST00000343508 OR4N5Q8IXE1 308 aa4.42□□□□□ -1.7
CSMD3-203ENST00000343508 C16orf58Q96GQ5 468 aa4.42□□□□□ -1.7
CSMD3-203ENST00000343508 LURAP1Q96LR2 239 aa4.42□□□□□ -1.7
CSMD3-203ENST00000343508 NMNAT3Q96T66 252 aa4.42□□□□□ -1.7
CSMD3-203ENST00000343508 ALG12Q9BV10 488 aa4.42□□□□□ -1.7
CSMD3-203ENST00000343508 ST6GALNAC5Q9BVH7 336 aa4.42□□□□□ -1.7
CSMD3-203ENST00000343508 ZNF860A6NHJ4 632 aa4.42□□□□□ -1.7
CSMD3-203ENST00000343508 PIP5K1CO60331 668 aa4.42□□□□□ -1.7
CSMD3-203ENST00000343508 OR4E1P0C645 316 aa4.42□□□□□ -1.7
CSMD3-203ENST00000343508 DGCR2P98153 550 aa4.42□□□□□ -1.7
CSMD3-203ENST00000343508 CDK3Q00526 305 aa4.42□□□□□ -1.7
CSMD3-203ENST00000343508 REEP5Q00765 189 aa4.42□□□□□ -1.7
CSMD3-203ENST00000343508 FAM26DQ5JW98 314 aa4.42□□□□□ -1.7
CSMD3-203ENST00000343508 TMEM71Q6P5X7 295 aa4.42□□□□□ -1.7
CSMD3-203ENST00000343508 DLK2Q6UY11 383 aa4.42□□□□□ -1.7
CSMD3-203ENST00000343508 GRASPQ7Z6J2 395 aaPredicted RBP4.42□□□□□ -1.7
CSMD3-203ENST00000343508 OR51D1Q8NGF3 324 aa4.42□□□□□ -1.7
CSMD3-203ENST00000343508 ST8SIA2Q92186 375 aa4.42□□□□□ -1.7
CSMD3-203ENST00000343508 SMIM14Q96QK8 99 aa4.42□□□□□ -1.7
CSMD3-203ENST00000343508 TNFRSF13CQ96RJ3 184 aa4.42□□□□□ -1.7
CSMD3-203ENST00000343508 PPP4R1LQ9P1A2 415 aa4.42□□□□□ -1.7
CSMD3-203ENST00000343508 MTCL1Q9Y4B5 1905 aaKnown RBP4.42□□□□□ -1.7
CSMD3-203ENST00000343508 RAD1O60671 282 aa4.42□□□□□ -1.7
CSMD3-203ENST00000343508 ATG12O94817 140 aa4.42□□□□□ -1.7
CSMD3-203ENST00000343508 BMPR1AP36894 532 aa4.42□□□□□ -1.7
CSMD3-203ENST00000343508 EMP2P54851 167 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms