RNA–Protein interactions for RNA: ENST00000342988.7

SMAD4-201, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-201ENST00000342988 CLDN8P56748 225 aa16.46■□□□□ 0.23
SMAD4-201ENST00000342988 KRTDAPP60985 99 aa16.46■□□□□ 0.23
SMAD4-201ENST00000342988 MS4A13Q5J8X5 152 aa16.46■□□□□ 0.23
SMAD4-201ENST00000342988 TREML2Q5T2D2 321 aa16.46■□□□□ 0.23
SMAD4-201ENST00000342988 FDX2Q6P4F2 183 aa16.46■□□□□ 0.23
SMAD4-201ENST00000342988 SLC7A5P1Q8MH63 180 aa16.46■□□□□ 0.23
SMAD4-201ENST00000342988 SLC25A18Q9H1K4 315 aa16.46■□□□□ 0.23
SMAD4-201ENST00000342988 APOBEC3BQ9UH17 382 aaKnown RBP16.46■□□□□ 0.23
SMAD4-201ENST00000342988 ZNF217O75362 1048 aa16.46■□□□□ 0.23
SMAD4-201ENST00000342988 S100A11P31949 105 aa16.46■□□□□ 0.23
SMAD4-201ENST00000342988 MEF2AQ02078 507 aaPredicted RBP16.46■□□□□ 0.23
SMAD4-201ENST00000342988 C5orf46Q6UWT4 87 aa16.46■□□□□ 0.23
SMAD4-201ENST00000342988 ST8SIA2Q92186 375 aa16.46■□□□□ 0.23
SMAD4-201ENST00000342988 ANKMY1Q9P2S6 941 aa16.46■□□□□ 0.23
SMAD4-201ENST00000342988 RIPK3Q9Y572 518 aa16.46■□□□□ 0.23
SMAD4-201ENST00000342988 CDK2AP1O14519 115 aa16.46■□□□□ 0.23
SMAD4-201ENST00000342988 SRMP19623 302 aa16.46■□□□□ 0.23
SMAD4-201ENST00000342988 GGNBP1Q5YKI7 109 aa16.46■□□□□ 0.23
SMAD4-201ENST00000342988 CDRT4Q8N9R6 151 aa16.46■□□□□ 0.23
SMAD4-201ENST00000342988 ZMYND19Q96E35 227 aaPredicted RBP16.46■□□□□ 0.23
SMAD4-201ENST00000342988 VN1R3Q9BXE9 311 aa16.46■□□□□ 0.23
SMAD4-201ENST00000342988 SORDQ00796 357 aa16.46■□□□□ 0.22
SMAD4-201ENST00000342988 RGMBQ6NW40 437 aa16.46■□□□□ 0.22
SMAD4-201ENST00000342988 OR2A1Q8NGT9 310 aa16.46■□□□□ 0.22
SMAD4-201ENST00000342988 ZNF566Q969W8 418 aa16.46■□□□□ 0.22
SMAD4-201ENST00000342988 USP36Q9P275 1121 aaKnown RBP16.46■□□□□ 0.22
SMAD4-201ENST00000342988 E5RGE8 158 aa16.46■□□□□ 0.22
SMAD4-201ENST00000342988 KLRK1P26718 216 aa16.46■□□□□ 0.22
SMAD4-201ENST00000342988 SSTR4P31391 388 aa16.46■□□□□ 0.22
SMAD4-201ENST00000342988 HTR5AP47898 357 aa16.46■□□□□ 0.22
SMAD4-201ENST00000342988 RNF144AP50876 292 aaPredicted RBP16.46■□□□□ 0.22
SMAD4-201ENST00000342988 FFAR4Q5NUL3 377 aa16.46■□□□□ 0.22
SMAD4-201ENST00000342988 SUSD3Q96L08 255 aa16.46■□□□□ 0.22
SMAD4-201ENST00000342988 POLEQ07864 2286 aa16.45■□□□□ 0.22
SMAD4-201ENST00000342988 TCRBV5S4A2TA0A5A2 114 aa16.45■□□□□ 0.22
SMAD4-201ENST00000342988 ST8SIA5O15466 376 aa16.45■□□□□ 0.22
SMAD4-201ENST00000342988 GOSR1O95249 250 aa16.45■□□□□ 0.22
SMAD4-201ENST00000342988 TBC1D28Q2M2D7 210 aa16.45■□□□□ 0.22
SMAD4-201ENST00000342988 MFSD6LQ8IWD5 586 aa16.45■□□□□ 0.22
SMAD4-201ENST00000342988 FEZF1A0PJY2 475 aa16.45■□□□□ 0.22
SMAD4-201ENST00000342988 TAL1P17542 331 aaPredicted RBP16.45■□□□□ 0.22
SMAD4-201ENST00000342988 OR51A2Q8NGJ7 313 aa16.45■□□□□ 0.22
SMAD4-201ENST00000342988 MOCOSQ96EN8 888 aa16.45■□□□□ 0.22
SMAD4-201ENST00000342988 ATG101Q9BSB4 218 aa16.45■□□□□ 0.22
SMAD4-201ENST00000342988 DPH7Q9BTV6 452 aa16.45■□□□□ 0.22
SMAD4-201ENST00000342988 ENPP4Q9Y6X5 453 aa16.45■□□□□ 0.22
SMAD4-201ENST00000342988 ABCC6O95255 1503 aa16.45■□□□□ 0.22
SMAD4-201ENST00000342988 BMPR1BO00238 502 aa16.45■□□□□ 0.22
SMAD4-201ENST00000342988 MRPL33O75394 65 aaKnown RBP16.45■□□□□ 0.22
SMAD4-201ENST00000342988 PMS2P2O95744 297 aa16.45■□□□□ 0.22
SMAD4-201ENST00000342988 BMPR1AP36894 532 aa16.45■□□□□ 0.22
SMAD4-201ENST00000342988 OXA1LQ15070 435 aa16.45■□□□□ 0.22
SMAD4-201ENST00000342988 NADSYN1Q6IA69 706 aa16.45■□□□□ 0.22
SMAD4-201ENST00000342988 PPP1R3BQ86XI6 285 aa16.45■□□□□ 0.22
SMAD4-201ENST00000342988 PRSS35Q8N3Z0 413 aa16.45■□□□□ 0.22
SMAD4-201ENST00000342988 HSD17B14Q9BPX1 270 aa16.45■□□□□ 0.22
SMAD4-201ENST00000342988 CNOT2Q9NZN8 540 aaKnown RBP16.45■□□□□ 0.22
SMAD4-201ENST00000342988 CXXC1Q9P0U4 656 aaPredicted RBP16.45■□□□□ 0.22
SMAD4-201ENST00000342988 ANTXRLA6NF34 631 aa16.45■□□□□ 0.22
SMAD4-201ENST00000342988 OR10A3P58181 314 aa16.45■□□□□ 0.22
SMAD4-201ENST00000342988 HERVK_113P61574 105 aa16.45■□□□□ 0.22
SMAD4-201ENST00000342988 CXCL9Q07325 125 aa16.45■□□□□ 0.22
SMAD4-201ENST00000342988 MRPL22Q9NWU5 206 aaKnown RBP16.45■□□□□ 0.22
SMAD4-201ENST00000342988 DDNO94850 711 aaPredicted RBP16.45■□□□□ 0.22
SMAD4-201ENST00000342988 OR5A2Q8NGI9 324 aa16.45■□□□□ 0.22
SMAD4-201ENST00000342988 MRIQ9BWK5 157 aa16.45■□□□□ 0.22
SMAD4-201ENST00000342988 A0A0A6YYJ9 748 aa16.45■□□□□ 0.22
SMAD4-201ENST00000342988 HMGCLP35914 325 aa16.45■□□□□ 0.22
SMAD4-201ENST00000342988 KLHDC8AQ8IYD2 350 aa16.45■□□□□ 0.22
SMAD4-201ENST00000342988 IMP4Q96G21 291 aaKnown RBP16.45■□□□□ 0.22
SMAD4-201ENST00000342988 FAM198AQ9UFP1 575 aa16.45■□□□□ 0.22
SMAD4-201ENST00000342988 TDRD15B5MCY1 1934 aaKnown RBP16.45■□□□□ 0.22
SMAD4-201ENST00000342988 TMEM269A0A1B0GVZ9 245 aa16.45■□□□□ 0.22
SMAD4-201ENST00000342988 M0R143 59 aa16.45■□□□□ 0.22
SMAD4-201ENST00000342988 HHEXQ03014 270 aa16.45■□□□□ 0.22
SMAD4-201ENST00000342988 LSAMPQ13449 338 aa16.45■□□□□ 0.22
SMAD4-201ENST00000342988 RPE65Q16518 533 aa16.45■□□□□ 0.22
SMAD4-201ENST00000342988 ALKAL2Q6UX46 152 aa16.45■□□□□ 0.22
SMAD4-201ENST00000342988 DEFB119Q8N690 84 aa16.45■□□□□ 0.22
SMAD4-201ENST00000342988 SCAMP5Q8TAC9 235 aa16.45■□□□□ 0.22
SMAD4-201ENST00000342988 C1QTNF2Q9BXJ5 285 aa16.45■□□□□ 0.22
SMAD4-201ENST00000342988 OR52A1Q9UKL2 312 aa16.45■□□□□ 0.22
SMAD4-201ENST00000342988 LCN8Q6JVE9 175 aa16.44■□□□□ 0.22
SMAD4-201ENST00000342988 RGPD1P0DJD0 1748 aa16.44■□□□□ 0.22
SMAD4-201ENST00000342988 TMEM88BA6NKF7 163 aa16.44■□□□□ 0.22
SMAD4-201ENST00000342988 ADRB1P08588 477 aa16.44■□□□□ 0.22
SMAD4-201ENST00000342988 RABGGTBP53611 331 aa16.44■□□□□ 0.22
SMAD4-201ENST00000342988 ZNF724A8MTY0 619 aa16.44■□□□□ 0.22
SMAD4-201ENST00000342988 CTXN2P0C2S0 81 aa16.44■□□□□ 0.22
SMAD4-201ENST00000342988 SLC16A14Q7RTX9 510 aa16.44■□□□□ 0.22
SMAD4-201ENST00000342988 SIAH1Q8IUQ4 282 aa16.44■□□□□ 0.22
SMAD4-201ENST00000342988 DPH1Q9BZG8 443 aa16.44■□□□□ 0.22
SMAD4-201ENST00000342988 SELENOIQ9C0D9 397 aa16.44■□□□□ 0.22
SMAD4-201ENST00000342988 GSX1Q9H4S2 264 aaPredicted RBP16.44■□□□□ 0.22
SMAD4-201ENST00000342988 GSTO2Q9H4Y5 243 aa16.44■□□□□ 0.22
SMAD4-201ENST00000342988 ZNF256Q9Y2P7 627 aaPredicted RBP16.44■□□□□ 0.22
SMAD4-201ENST00000342988 TIMM9Q9Y5J7 89 aa16.44■□□□□ 0.22
SMAD4-201ENST00000342988 HCCSP53701 268 aa16.44■□□□□ 0.22
SMAD4-201ENST00000342988 FAM57BQ71RH2 274 aa16.44■□□□□ 0.22
SMAD4-201ENST00000342988 GLIS3Q8NEA6 775 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms