RNA–Protein interactions for RNA: ENST00000341247.8

LIMA1-201, Transcript of LIM domain and actin binding 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMA1, Length 3,706 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-201ENST00000341247 MS4A15Q8N5U1 240 aa9.41□□□□□ -0.9
LIMA1-201ENST00000341247 SCAIQ8N9R8 606 aa9.41□□□□□ -0.9
LIMA1-201ENST00000341247 DNAAF1Q8NEP3 725 aa9.41□□□□□ -0.9
LIMA1-201ENST00000341247 OR14A16Q8NHC5 309 aa9.41□□□□□ -0.9
LIMA1-201ENST00000341247 LGALS14Q8TCE9 139 aa9.41□□□□□ -0.9
LIMA1-201ENST00000341247 SLC46A1Q96NT5 459 aa9.41□□□□□ -0.9
LIMA1-201ENST00000341247 CTRCQ99895 268 aa9.41□□□□□ -0.9
LIMA1-201ENST00000341247 VN1R1Q9GZP7 353 aa9.41□□□□□ -0.9
LIMA1-201ENST00000341247 INMT-MINDY4F8WBC2 141 aa9.4□□□□□ -0.9
LIMA1-201ENST00000341247 ZFPL1O95159 310 aa9.4□□□□□ -0.9
LIMA1-201ENST00000341247 FCER2P06734 321 aa9.4□□□□□ -0.9
LIMA1-201ENST00000341247 ACTA2P62736 377 aa9.4□□□□□ -0.9
LIMA1-201ENST00000341247 ACTG2P63267 376 aa9.4□□□□□ -0.9
LIMA1-201ENST00000341247 FAM69BQ5VUD6 431 aa9.4□□□□□ -0.9
LIMA1-201ENST00000341247 SLC35D2Q76EJ3 337 aa9.4□□□□□ -0.9
LIMA1-201ENST00000341247 PXKQ7Z7A4 578 aa9.4□□□□□ -0.9
LIMA1-201ENST00000341247 POMGNT2Q8NAT1 580 aa9.4□□□□□ -0.9
LIMA1-201ENST00000341247 ACOT12Q8WYK0 555 aa9.4□□□□□ -0.9
LIMA1-201ENST00000341247 ADIPOR1Q96A54 375 aa9.4□□□□□ -0.9
LIMA1-201ENST00000341247 MCUBQ9NWR8 336 aa9.4□□□□□ -0.9
LIMA1-201ENST00000341247 NOX1Q9Y5S8 564 aa9.4□□□□□ -0.9
LIMA1-201ENST00000341247 BCAT2O15382 392 aaPredicted RBP9.4□□□□□ -0.9
LIMA1-201ENST00000341247 DUX1O43812 170 aa9.4□□□□□ -0.9
LIMA1-201ENST00000341247 CFL1P23528 166 aaKnown RBP9.4□□□□□ -0.9
LIMA1-201ENST00000341247 NUDT1P36639 197 aa9.4□□□□□ -0.9
LIMA1-201ENST00000341247 DDOSTP39656 456 aa9.4□□□□□ -0.9
LIMA1-201ENST00000341247 EBPQ15125 230 aaKnown RBP9.4□□□□□ -0.9
LIMA1-201ENST00000341247 CDONQ4KMG0 1287 aa9.4□□□□□ -0.9
LIMA1-201ENST00000341247 CEP78Q5JTW2 689 aa9.4□□□□□ -0.9
LIMA1-201ENST00000341247 BCL2L15Q5TBC7 163 aa9.4□□□□□ -0.9
LIMA1-201ENST00000341247 LINC01590Q5TEZ4 76 aa9.4□□□□□ -0.9
LIMA1-201ENST00000341247 FNDC7Q5VTL7 733 aa9.4□□□□□ -0.9
LIMA1-201ENST00000341247 OR6V1Q8N148 313 aa9.4□□□□□ -0.9
LIMA1-201ENST00000341247 SDR16C5Q8N3Y7 309 aa9.4□□□□□ -0.9
LIMA1-201ENST00000341247 GALNT6Q8NCL4 622 aa9.4□□□□□ -0.9
LIMA1-201ENST00000341247 OMA1Q96E52 524 aa9.4□□□□□ -0.9
LIMA1-201ENST00000341247 TSPAN32Q96QS1 320 aa9.4□□□□□ -0.9
LIMA1-201ENST00000341247 NKIRAS2Q9NYR9 191 aa9.4□□□□□ -0.9
LIMA1-201ENST00000341247 PIN1P1O15428 100 aa9.4□□□□□ -0.91
LIMA1-201ENST00000341247 SC5DO75845 299 aa9.4□□□□□ -0.91
LIMA1-201ENST00000341247 GLCEO94923 617 aa9.4□□□□□ -0.91
LIMA1-201ENST00000341247 PNMTP11086 282 aa9.4□□□□□ -0.91
LIMA1-201ENST00000341247 EPXP11678 715 aa9.4□□□□□ -0.91
LIMA1-201ENST00000341247 PRKCAP17252 672 aa9.4□□□□□ -0.91
LIMA1-201ENST00000341247 NPR2P20594 1047 aa9.4□□□□□ -0.91
LIMA1-201ENST00000341247 SF3A2Q15428 464 aaKnown RBP9.4□□□□□ -0.91
LIMA1-201ENST00000341247 MESTQ5EB52 335 aa9.4□□□□□ -0.91
LIMA1-201ENST00000341247 LIPNQ5VXI9 398 aa9.4□□□□□ -0.91
LIMA1-201ENST00000341247 METAP1DQ6UB28 335 aaPredicted RBP9.4□□□□□ -0.91
LIMA1-201ENST00000341247 OR7G1Q8NGA0 311 aa9.4□□□□□ -0.91
LIMA1-201ENST00000341247 DUSP19Q8WTR2 217 aa9.4□□□□□ -0.91
LIMA1-201ENST00000341247 ZNF578Q96N58 590 aaPredicted RBP9.4□□□□□ -0.91
LIMA1-201ENST00000341247 DDOQ99489 341 aa9.4□□□□□ -0.91
LIMA1-201ENST00000341247 AUNIPQ9H7T9 357 aa9.4□□□□□ -0.91
LIMA1-201ENST00000341247 ARPC3O15145 178 aa9.39□□□□□ -0.91
LIMA1-201ENST00000341247 SLC25A12O75746 678 aa9.39□□□□□ -0.91
LIMA1-201ENST00000341247 OPN1LWP04000 364 aa9.39□□□□□ -0.91
LIMA1-201ENST00000341247 IGKV3-11P04433 115 aa9.39□□□□□ -0.91
LIMA1-201ENST00000341247 SNRPD2P62316 118 aaKnown RBP9.39□□□□□ -0.91
LIMA1-201ENST00000341247 RPS4XP62701 263 aaKnown RBP9.39□□□□□ -0.91
LIMA1-201ENST00000341247 BIKQ13323 160 aa9.39□□□□□ -0.91
LIMA1-201ENST00000341247 C6orf183Q5T699 404 aa9.39□□□□□ -0.91
LIMA1-201ENST00000341247 RPL22L1Q6P5R6 122 aaKnown RBP9.39□□□□□ -0.91
LIMA1-201ENST00000341247 TRILQ7L0X0 811 aa9.39□□□□□ -0.91
LIMA1-201ENST00000341247 TMPRSS9Q7Z410 1059 aa9.39□□□□□ -0.91
LIMA1-201ENST00000341247 PLXDC1Q8IUK5 500 aa9.39□□□□□ -0.91
LIMA1-201ENST00000341247 BMPERQ8N8U9 685 aa9.39□□□□□ -0.91
LIMA1-201ENST00000341247 OR10AC1Q8NH08 325 aa9.39□□□□□ -0.91
LIMA1-201ENST00000341247 ATOH1Q92858 354 aaPredicted RBP9.39□□□□□ -0.91
LIMA1-201ENST00000341247 NPAS1Q99742 590 aa9.39□□□□□ -0.91
LIMA1-201ENST00000341247 PRO3102Q9H379 93 aa9.39□□□□□ -0.91
LIMA1-201ENST00000341247 NUDT15Q9NV35 164 aa9.39□□□□□ -0.91
LIMA1-201ENST00000341247 NPAP1Q9NZP6 1156 aa9.39□□□□□ -0.91
LIMA1-201ENST00000341247 COPS7AQ9UBW8 275 aa9.39□□□□□ -0.91
LIMA1-201ENST00000341247 DMXL1Q9Y485 3027 aa9.39□□□□□ -0.91
LIMA1-201ENST00000341247 PI4KAP42356 2102 aa9.39□□□□□ -0.91
LIMA1-201ENST00000341247 FITM1A5D6W6 292 aa9.39□□□□□ -0.91
LIMA1-201ENST00000341247 NOTOA8MTQ0 251 aa9.39□□□□□ -0.91
LIMA1-201ENST00000341247 OGG1O15527 345 aa9.39□□□□□ -0.91
LIMA1-201ENST00000341247 AKR7A3O95154 331 aa9.39□□□□□ -0.91
LIMA1-201ENST00000341247 SYPP08247 313 aa9.39□□□□□ -0.91
LIMA1-201ENST00000341247 ABCD3P28288 659 aa9.39□□□□□ -0.91
LIMA1-201ENST00000341247 CCR6P51684 374 aa9.39□□□□□ -0.91
LIMA1-201ENST00000341247 ETFDHQ16134 617 aa9.39□□□□□ -0.91
LIMA1-201ENST00000341247 NTRK2Q16620 822 aa9.39□□□□□ -0.91
LIMA1-201ENST00000341247 HYAL4Q2M3T9 481 aa9.39□□□□□ -0.91
LIMA1-201ENST00000341247 ZNF440Q8IYI8 595 aa9.39□□□□□ -0.91
LIMA1-201ENST00000341247 TMEM246Q9BRR3 403 aa9.39□□□□□ -0.91
LIMA1-201ENST00000341247 PELOQ9BRX2 385 aaKnown RBP9.39□□□□□ -0.91
LIMA1-201ENST00000341247 EPHA6Q9UF33 1036 aa9.39□□□□□ -0.91
LIMA1-201ENST00000341247 LAMP5Q9UJQ1 280 aa9.39□□□□□ -0.91
LIMA1-201ENST00000341247 BLACEA4D250 179 aa9.39□□□□□ -0.91
LIMA1-201ENST00000341247 FRG2CA6NGY1 282 aa9.39□□□□□ -0.91
LIMA1-201ENST00000341247 ARL6IP5O75915 188 aa9.39□□□□□ -0.91
LIMA1-201ENST00000341247 SERPINA3P01011 423 aa9.39□□□□□ -0.91
LIMA1-201ENST00000341247 MAS1P04201 325 aa9.39□□□□□ -0.91
LIMA1-201ENST00000341247 IFI6P09912 130 aa9.39□□□□□ -0.91
LIMA1-201ENST00000341247 ARSBP15848 533 aa9.39□□□□□ -0.91
LIMA1-201ENST00000341247 SRMP19623 302 aa9.39□□□□□ -0.91
LIMA1-201ENST00000341247 SDHAP31040 664 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms