RNA–Protein interactions for RNA: ENST00000340660.10

ATXN3-201, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-201ENST00000340660 STEAP4Q687X5 459 aa9.05□□□□□ -0.96
ATXN3-201ENST00000340660 CD300LDQ6UXZ3 194 aa9.05□□□□□ -0.96
ATXN3-201ENST00000340660 ABHD12BQ7Z5M8 362 aaPredicted RBP9.05□□□□□ -0.96
ATXN3-201ENST00000340660 CMIPQ8IY22 773 aa9.05□□□□□ -0.96
ATXN3-201ENST00000340660 ZIC4Q8N9L1 334 aa9.05□□□□□ -0.96
ATXN3-201ENST00000340660 GPR119Q8TDV5 335 aa9.05□□□□□ -0.96
ATXN3-201ENST00000340660 TMEM45BQ96B21 275 aa9.05□□□□□ -0.96
ATXN3-201ENST00000340660 RANBP3Q9H6Z4 567 aaPredicted RBP9.05□□□□□ -0.96
ATXN3-201ENST00000340660 NANOGQ9H9S0 305 aa9.05□□□□□ -0.96
ATXN3-201ENST00000340660 FBXL7Q9UJT9 491 aa9.05□□□□□ -0.96
ATXN3-201ENST00000340660 ZNF780BQ9Y6R6 833 aa9.05□□□□□ -0.96
ATXN3-201ENST00000340660 ZNF587BE7ETH6 402 aa9.04□□□□□ -0.96
ATXN3-201ENST00000340660 STK16O75716 305 aa9.04□□□□□ -0.96
ATXN3-201ENST00000340660 IFNB1P01574 187 aa9.04□□□□□ -0.96
ATXN3-201ENST00000340660 IGHV1-46P01743 117 aa9.04□□□□□ -0.96
ATXN3-201ENST00000340660 MT-ND5P03915 603 aa9.04□□□□□ -0.96
ATXN3-201ENST00000340660 FAHP16930 419 aa9.04□□□□□ -0.96
ATXN3-201ENST00000340660 EPHA3P29320 983 aa9.04□□□□□ -0.96
ATXN3-201ENST00000340660 KLF3P57682 345 aaPredicted RBP9.04□□□□□ -0.96
ATXN3-201ENST00000340660 BTG1P62324 171 aa9.04□□□□□ -0.96
ATXN3-201ENST00000340660 H3F3AP84243 136 aa9.04□□□□□ -0.96
ATXN3-201ENST00000340660 TRMT5Q32P41 509 aaKnown RBP9.04□□□□□ -0.96
ATXN3-201ENST00000340660 FAM209AQ5JX71 171 aa9.04□□□□□ -0.96
ATXN3-201ENST00000340660 GRHL2Q6ISB3 625 aa9.04□□□□□ -0.96
ATXN3-201ENST00000340660 FRA10AC1Q70Z53 315 aa9.04□□□□□ -0.96
ATXN3-201ENST00000340660 MISPQ8IVT2 679 aa9.04□□□□□ -0.96
ATXN3-201ENST00000340660 PDZD9Q8IXQ8 264 aa9.04□□□□□ -0.96
ATXN3-201ENST00000340660 DDIASQ8IXT1 998 aa9.04□□□□□ -0.96
ATXN3-201ENST00000340660 KIF18AQ8NI77 898 aa9.04□□□□□ -0.96
ATXN3-201ENST00000340660 PIK3R3Q92569 461 aa9.04□□□□□ -0.96
ATXN3-201ENST00000340660 NSMAFQ92636 917 aa9.04□□□□□ -0.96
ATXN3-201ENST00000340660 LHX4Q969G2 390 aa9.04□□□□□ -0.96
ATXN3-201ENST00000340660 ZNF75AQ96N20 296 aa9.04□□□□□ -0.96
ATXN3-201ENST00000340660 ZNF385AQ96PM9 386 aaKnown RBP9.04□□□□□ -0.96
ATXN3-201ENST00000340660 DDOQ99489 341 aa9.04□□□□□ -0.96
ATXN3-201ENST00000340660 TM2D3Q9BRN9 247 aa9.04□□□□□ -0.96
ATXN3-201ENST00000340660 KIF17Q9P2E2 1029 aa9.04□□□□□ -0.96
ATXN3-201ENST00000340660 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.04□□□□□ -0.96
ATXN3-201ENST00000340660 SMAD5-AS1Q9Y6J3 95 aa9.04□□□□□ -0.96
ATXN3-201ENST00000340660 A0A1B0GVY2 172 aa9.03□□□□□ -0.96
ATXN3-201ENST00000340660 AQP7P3A6NL99 342 aa9.03□□□□□ -0.96
ATXN3-201ENST00000340660 KRT33AO76009 404 aa9.03□□□□□ -0.96
ATXN3-201ENST00000340660 TOX4O94842 621 aa9.03□□□□□ -0.96
ATXN3-201ENST00000340660 THY1P04216 161 aa9.03□□□□□ -0.96
ATXN3-201ENST00000340660 GLO1Q04760 184 aa9.03□□□□□ -0.96
ATXN3-201ENST00000340660 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.03□□□□□ -0.96
ATXN3-201ENST00000340660 SLC17A1Q14916 467 aa9.03□□□□□ -0.96
ATXN3-201ENST00000340660 TGFBIQ15582 683 aa9.03□□□□□ -0.96
ATXN3-201ENST00000340660 PRSS53Q2L4Q9 553 aa9.03□□□□□ -0.96
ATXN3-201ENST00000340660 SYT14P1Q58G82 188 aa9.03□□□□□ -0.96
ATXN3-201ENST00000340660 RGS7BPQ6MZT1 257 aaPredicted RBP9.03□□□□□ -0.96
ATXN3-201ENST00000340660 AAED1Q7RTV5 226 aa9.03□□□□□ -0.96
ATXN3-201ENST00000340660 OR5R1Q8NH85 324 aa9.03□□□□□ -0.96
ATXN3-201ENST00000340660 C8orf46Q8TAG6 207 aa9.03□□□□□ -0.96
ATXN3-201ENST00000340660 GEMIN6Q8WXD5 167 aaKnown RBP9.03□□□□□ -0.96
ATXN3-201ENST00000340660 ZHX1-C8orf76Q96EF9 292 aa9.03□□□□□ -0.96
ATXN3-201ENST00000340660 C3orf30Q96M34 536 aa9.03□□□□□ -0.96
ATXN3-201ENST00000340660 ANP32EQ9BTT0 268 aa9.03□□□□□ -0.96
ATXN3-201ENST00000340660 LMF2Q9BU23 707 aaKnown RBP9.03□□□□□ -0.96
ATXN3-201ENST00000340660 SERHL2Q9H4I8 314 aa9.03□□□□□ -0.96
ATXN3-201ENST00000340660 PFDN4Q9NQP4 134 aa9.03□□□□□ -0.96
ATXN3-201ENST00000340660 C20orf96Q9NUD7 363 aaPredicted RBP9.03□□□□□ -0.96
ATXN3-201ENST00000340660 FAM96BQ9Y3D0 163 aa9.03□□□□□ -0.96
ATXN3-201ENST00000340660 A0A096LPK6 155 aa9.02□□□□□ -0.97
ATXN3-201ENST00000340660 PRR23D1E9PI22 279 aaPredicted RBP9.02□□□□□ -0.97
ATXN3-201ENST00000340660 SPRY3O43610 288 aa9.02□□□□□ -0.97
ATXN3-201ENST00000340660 CCNT2O60583 730 aaKnown RBP9.02□□□□□ -0.97
ATXN3-201ENST00000340660 COQ9O75208 318 aa9.02□□□□□ -0.97
ATXN3-201ENST00000340660 PSMG1O95456 288 aa9.02□□□□□ -0.97
ATXN3-201ENST00000340660 FBP1P09467 338 aa9.02□□□□□ -0.97
ATXN3-201ENST00000340660 CCDC175P0C221 793 aa9.02□□□□□ -0.97
ATXN3-201ENST00000340660 ZSCAN5DPP0CG00 497 aa9.02□□□□□ -0.97
ATXN3-201ENST00000340660 PRR23D2P0DMB1 279 aaPredicted RBP9.02□□□□□ -0.97
ATXN3-201ENST00000340660 ZNF250P15622 560 aa9.02□□□□□ -0.97
ATXN3-201ENST00000340660 TYK2P29597 1187 aa9.02□□□□□ -0.97
ATXN3-201ENST00000340660 GABRA3P34903 492 aa9.02□□□□□ -0.97
ATXN3-201ENST00000340660 ECI1P42126 302 aa9.02□□□□□ -0.97
ATXN3-201ENST00000340660 P2RX1P51575 399 aa9.02□□□□□ -0.97
ATXN3-201ENST00000340660 ERVS71-1P61550 626 aa9.02□□□□□ -0.97
ATXN3-201ENST00000340660 NDUFAF6Q330K2 333 aa9.02□□□□□ -0.97
ATXN3-201ENST00000340660 TIGD2Q4W5G0 525 aa9.02□□□□□ -0.97
ATXN3-201ENST00000340660 HSP90AA5PQ58FG0 334 aa9.02□□□□□ -0.97
ATXN3-201ENST00000340660 KLBQ86Z14 1044 aa9.02□□□□□ -0.97
ATXN3-201ENST00000340660 HSCBQ8IWL3 235 aa9.02□□□□□ -0.97
ATXN3-201ENST00000340660 SIGLEC11Q96RL6 698 aa9.02□□□□□ -0.97
ATXN3-201ENST00000340660 MCRIP2Q9BUT9 160 aaKnown RBP9.02□□□□□ -0.97
ATXN3-201ENST00000340660 ZNF702PQ9H963 129 aa9.02□□□□□ -0.97
ATXN3-201ENST00000340660 CNOT10Q9H9A5 744 aaKnown RBP9.02□□□□□ -0.97
ATXN3-201ENST00000340660 TMEM106BQ9NUM4 274 aa9.02□□□□□ -0.97
ATXN3-201ENST00000340660 B3GNT2Q9NY97 397 aa9.02□□□□□ -0.97
ATXN3-201ENST00000340660 SLCO1C1Q9NYB5 712 aa9.02□□□□□ -0.97
ATXN3-201ENST00000340660 PSME2Q9UL46 239 aa9.02□□□□□ -0.97
ATXN3-201ENST00000340660 CARD8Q9Y2G2 431 aa9.02□□□□□ -0.97
ATXN3-201ENST00000340660 PKD1P98161 4303 aa9.01□□□□□ -0.97
ATXN3-201ENST00000340660 A0A1W2PQD3 144 aa9.01□□□□□ -0.97
ATXN3-201ENST00000340660 ZNF879B4DU55 563 aa9.01□□□□□ -0.97
ATXN3-201ENST00000340660 ZNF500O60304 480 aaPredicted RBP9.01□□□□□ -0.97
ATXN3-201ENST00000340660 UPK3AO75631 287 aa9.01□□□□□ -0.97
ATXN3-201ENST00000340660 PMS2P2O95744 297 aa9.01□□□□□ -0.97
ATXN3-201ENST00000340660 CLIC3O95833 236 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms