RNA–Protein interactions for RNA: ENST00000318266.9

PTPRA-202, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRA, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-202ENST00000318266 TBC1D3EA0A087X179 549 aa8.84□□□□□ -0.99
PTPRA-202ENST00000318266 A0A1B0GW55 424 aa8.84□□□□□ -0.99
PTPRA-202ENST00000318266 KANTRA0A1W2PQU2 76 aa8.84□□□□□ -0.99
PTPRA-202ENST00000318266 MCIDASD6RGH6 385 aa8.84□□□□□ -0.99
PTPRA-202ENST00000318266 PRSS44E7EML9 344 aa8.84□□□□□ -0.99
PTPRA-202ENST00000318266 M0QYG6 137 aa8.84□□□□□ -0.99
PTPRA-202ENST00000318266 TGM5O43548 720 aa8.84□□□□□ -0.99
PTPRA-202ENST00000318266 SLC25A12O75746 678 aa8.84□□□□□ -0.99
PTPRA-202ENST00000318266 IFNGP01579 166 aa8.84□□□□□ -0.99
PTPRA-202ENST00000318266 ANXA2P07355 339 aaKnown RBP8.84□□□□□ -0.99
PTPRA-202ENST00000318266 NGFRP08138 427 aa8.84□□□□□ -0.99
PTPRA-202ENST00000318266 DUX4L2P0CJ85 424 aa8.84□□□□□ -0.99
PTPRA-202ENST00000318266 DUX4L3P0CJ86 424 aa8.84□□□□□ -0.99
PTPRA-202ENST00000318266 DUX4L4P0CJ87 422 aa8.84□□□□□ -0.99
PTPRA-202ENST00000318266 DUX4L5P0CJ88 424 aa8.84□□□□□ -0.99
PTPRA-202ENST00000318266 DUX4L6P0CJ89 424 aa8.84□□□□□ -0.99
PTPRA-202ENST00000318266 DUX4L7P0CJ90 424 aa8.84□□□□□ -0.99
PTPRA-202ENST00000318266 FAUP35544 74 aaKnown RBP8.84□□□□□ -0.99
PTPRA-202ENST00000318266 EEF1A1P68104 462 aaKnown RBP8.84□□□□□ -0.99
PTPRA-202ENST00000318266 LTBQ06643 244 aa8.84□□□□□ -0.99
PTPRA-202ENST00000318266 PRDX1Q06830 199 aaKnown RBP8.84□□□□□ -0.99
PTPRA-202ENST00000318266 IL10RAQ13651 578 aa8.84□□□□□ -0.99
PTPRA-202ENST00000318266 PON3Q15166 354 aa8.84□□□□□ -0.99
PTPRA-202ENST00000318266 RAB30Q15771 203 aa8.84□□□□□ -0.99
PTPRA-202ENST00000318266 HFEQ30201 348 aa8.84□□□□□ -0.99
PTPRA-202ENST00000318266 FNDC3BQ53EP0 1204 aaKnown RBP8.84□□□□□ -0.99
PTPRA-202ENST00000318266 PRRT3Q5FWE3 981 aa8.84□□□□□ -0.99
PTPRA-202ENST00000318266 RAB12Q6IQ22 244 aa8.84□□□□□ -0.99
PTPRA-202ENST00000318266 STAC2Q6ZMT1 411 aa8.84□□□□□ -0.99
PTPRA-202ENST00000318266 OR2W3Q7Z3T1 314 aa8.84□□□□□ -0.99
PTPRA-202ENST00000318266 EIF4E3Q8N5X7 224 aaKnown RBP8.84□□□□□ -0.99
PTPRA-202ENST00000318266 OR51D1Q8NGF3 324 aa8.84□□□□□ -0.99
PTPRA-202ENST00000318266 ARRDC3Q96B67 414 aa8.84□□□□□ -0.99
PTPRA-202ENST00000318266 CPNE2Q96FN4 548 aaPredicted RBP8.84□□□□□ -0.99
PTPRA-202ENST00000318266 TOX2Q96NM4 488 aa8.84□□□□□ -0.99
PTPRA-202ENST00000318266 SLC25A32Q9H2D1 315 aa8.84□□□□□ -0.99
PTPRA-202ENST00000318266 PRSS16Q9NQE7 514 aa8.84□□□□□ -0.99
PTPRA-202ENST00000318266 RASL12Q9NYN1 266 aa8.84□□□□□ -0.99
PTPRA-202ENST00000318266 MYEF2Q9P2K5 600 aaKnown RBP8.84□□□□□ -0.99
PTPRA-202ENST00000318266 DUX4Q9UBX2 424 aa8.84□□□□□ -0.99
PTPRA-202ENST00000318266 APOBEC3BQ9UH17 382 aaKnown RBP8.84□□□□□ -0.99
PTPRA-202ENST00000318266 CES1P1Q9UKY3 287 aa8.84□□□□□ -0.99
PTPRA-202ENST00000318266 PLXNA2O75051 1894 aa8.84□□□□□ -0.99
PTPRA-202ENST00000318266 C17orf113A0A1B0GUU1 675 aa8.84□□□□□ -0.99
PTPRA-202ENST00000318266 OR6C68A6NDL8 312 aa8.84□□□□□ -0.99
PTPRA-202ENST00000318266 SNRNP200O75643 2136 aaKnown RBP8.84□□□□□ -0.99
PTPRA-202ENST00000318266 AQP8O94778 261 aa8.84□□□□□ -0.99
PTPRA-202ENST00000318266 OR2T7P0C7T2 308 aa8.84□□□□□ -0.99
PTPRA-202ENST00000318266 SPP1P10451 314 aa8.84□□□□□ -0.99
PTPRA-202ENST00000318266 BDKRB2P30411 391 aa8.84□□□□□ -0.99
PTPRA-202ENST00000318266 SCRN3Q0VDG4 424 aa8.84□□□□□ -0.99
PTPRA-202ENST00000318266 PRAMEF8Q5VWM4 474 aa8.84□□□□□ -0.99
PTPRA-202ENST00000318266 PRAMEF7Q5VXH5 474 aa8.84□□□□□ -0.99
PTPRA-202ENST00000318266 LHX8Q68G74 356 aa8.84□□□□□ -0.99
PTPRA-202ENST00000318266 MTSS1LQ765P7 747 aa8.84□□□□□ -0.99
PTPRA-202ENST00000318266 ZAR1Q86SH2 424 aa8.84□□□□□ -0.99
PTPRA-202ENST00000318266 OR2T27Q8NH04 317 aa8.84□□□□□ -0.99
PTPRA-202ENST00000318266 OR10AC1Q8NH08 325 aa8.84□□□□□ -0.99
PTPRA-202ENST00000318266 NANPQ8TBE9 248 aa8.84□□□□□ -0.99
PTPRA-202ENST00000318266 RASD2Q96D21 266 aa8.84□□□□□ -0.99
PTPRA-202ENST00000318266 ZNF681Q96N22 645 aa8.84□□□□□ -0.99
PTPRA-202ENST00000318266 VRK1Q99986 396 aaPredicted RBP8.84□□□□□ -0.99
PTPRA-202ENST00000318266 CRB3Q9BUF7 120 aa8.84□□□□□ -0.99
PTPRA-202ENST00000318266 MENTQ9BUN1 341 aa8.84□□□□□ -0.99
PTPRA-202ENST00000318266 MTIF3Q9H2K0 278 aaKnown RBP8.84□□□□□ -0.99
PTPRA-202ENST00000318266 KLF2Q9Y5W3 355 aaPredicted RBP8.84□□□□□ -0.99
PTPRA-202ENST00000318266 TRAV8-7A0A075B6U6 113 aa8.83□□□□□ -1
PTPRA-202ENST00000318266 TRAV20A0A0B4J274 112 aa8.83□□□□□ -1
PTPRA-202ENST00000318266 DUXAA6NLW8 204 aa8.83□□□□□ -1
PTPRA-202ENST00000318266 MPTX1A8MV57 137 aa8.83□□□□□ -1
PTPRA-202ENST00000318266 LINC00587B1AMM8 73 aa8.83□□□□□ -1
PTPRA-202ENST00000318266 PQBP1O60828 265 aaKnown RBP8.83□□□□□ -1
PTPRA-202ENST00000318266 AKR7A3O95154 331 aa8.83□□□□□ -1
PTPRA-202ENST00000318266 PAK4O96013 591 aaPredicted RBP8.83□□□□□ -1
PTPRA-202ENST00000318266 C8AP07357 584 aa8.83□□□□□ -1
PTPRA-202ENST00000318266 FOSL2P15408 326 aa8.83□□□□□ -1
PTPRA-202ENST00000318266 MEOX2P50222 304 aa8.83□□□□□ -1
PTPRA-202ENST00000318266 TRA2BP62995 288 aaKnown RBP8.83□□□□□ -1
PTPRA-202ENST00000318266 SRSF3P84103 164 aaKnown RBP8.83□□□□□ -1
PTPRA-202ENST00000318266 TEAD2Q15562 447 aa8.83□□□□□ -1
PTPRA-202ENST00000318266 SCGB2B2Q4G0G5 96 aa8.83□□□□□ -1
PTPRA-202ENST00000318266 ZCCHC12Q6PEW1 402 aa8.83□□□□□ -1
PTPRA-202ENST00000318266 RAB11FIP2Q7L804 512 aa8.83□□□□□ -1
PTPRA-202ENST00000318266 SLC16A13Q7RTY0 426 aa8.83□□□□□ -1
PTPRA-202ENST00000318266 NRSN1Q8IZ57 195 aa8.83□□□□□ -1
PTPRA-202ENST00000318266 COX18Q8N8Q8 333 aa8.83□□□□□ -1
PTPRA-202ENST00000318266 OR2L5Q8NG80 312 aa8.83□□□□□ -1
PTPRA-202ENST00000318266 OR5T2Q8NGG2 359 aa8.83□□□□□ -1
PTPRA-202ENST00000318266 OR51A4Q8NGJ6 313 aa8.83□□□□□ -1
PTPRA-202ENST00000318266 MIB2Q96AX9 1013 aa8.83□□□□□ -1
PTPRA-202ENST00000318266 MOAP1Q96BY2 351 aa8.83□□□□□ -1
PTPRA-202ENST00000318266 DNAJA3Q96EY1 480 aa8.83□□□□□ -1
PTPRA-202ENST00000318266 ZNF514Q96K75 400 aaPredicted RBP8.83□□□□□ -1
PTPRA-202ENST00000318266 TRPV4Q9HBA0 871 aa8.83□□□□□ -1
PTPRA-202ENST00000318266 SPHK1Q9NYA1 384 aa8.83□□□□□ -1
PTPRA-202ENST00000318266 CDV3Q9UKY7 258 aaKnown RBP8.83□□□□□ -1
PTPRA-202ENST00000318266 FARSAQ9Y285 508 aaKnown RBP8.83□□□□□ -1
PTPRA-202ENST00000318266 PLEKHA6Q9Y2H5 1048 aa8.83□□□□□ -1
PTPRA-202ENST00000318266 ZNF281Q9Y2X9 895 aa8.83□□□□□ -1
PTPRA-202ENST00000318266 NUP210Q8TEM1 1887 aaPredicted RBP8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms