RNA–Protein interactions for RNA: ENST00000317968.8

PDLIM5-201, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDLIM5, Length 6,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-201ENST00000317968 SESN1Q9Y6P5 492 aa7.83□□□□□ -1.16
PDLIM5-201ENST00000317968 SEC16AO15027 2179 aa7.83□□□□□ -1.16
PDLIM5-201ENST00000317968 TRGV5A0A0B4J1U4 118 aa7.83□□□□□ -1.16
PDLIM5-201ENST00000317968 SLC22A20A6NK97 555 aa7.83□□□□□ -1.16
PDLIM5-201ENST00000317968 ZAR1LA6NP61 321 aa7.83□□□□□ -1.16
PDLIM5-201ENST00000317968 SCGNO76038 276 aa7.83□□□□□ -1.16
PDLIM5-201ENST00000317968 FAM69AQ5T7M9 428 aa7.83□□□□□ -1.16
PDLIM5-201ENST00000317968 NXNL2Q5VZ03 156 aa7.83□□□□□ -1.16
PDLIM5-201ENST00000317968 TMPRSS11FQ6ZWK6 438 aa7.83□□□□□ -1.16
PDLIM5-201ENST00000317968 ZNF627Q7L945 461 aa7.83□□□□□ -1.16
PDLIM5-201ENST00000317968 DPPA2Q7Z7J5 298 aa7.83□□□□□ -1.16
PDLIM5-201ENST00000317968 C1orf87Q8N0U7 546 aa7.83□□□□□ -1.16
PDLIM5-201ENST00000317968 OR13C3Q8NGS6 347 aa7.83□□□□□ -1.16
PDLIM5-201ENST00000317968 OR6S1Q8NH40 331 aa7.83□□□□□ -1.16
PDLIM5-201ENST00000317968 RABL2AQ9UBK7 228 aaPredicted RBP7.83□□□□□ -1.16
PDLIM5-201ENST00000317968 RABL2BQ9UNT1 228 aa7.83□□□□□ -1.16
PDLIM5-201ENST00000317968 CARD8Q9Y2G2 431 aa7.83□□□□□ -1.16
PDLIM5-201ENST00000317968 PCDHGA3Q9Y5H0 932 aa7.83□□□□□ -1.16
PDLIM5-201ENST00000317968 A6NHS1 94 aa7.83□□□□□ -1.16
PDLIM5-201ENST00000317968 GASTP01350 101 aa7.83□□□□□ -1.16
PDLIM5-201ENST00000317968 MT-ND2P03891 347 aa7.83□□□□□ -1.16
PDLIM5-201ENST00000317968 CDK1P06493 297 aa7.83□□□□□ -1.16
PDLIM5-201ENST00000317968 GPR4P46093 362 aa7.83□□□□□ -1.16
PDLIM5-201ENST00000317968 RSU1Q15404 277 aa7.83□□□□□ -1.16
PDLIM5-201ENST00000317968 SPHARQ15513 63 aa7.83□□□□□ -1.16
PDLIM5-201ENST00000317968 HS3ST5Q8IZT8 346 aa7.83□□□□□ -1.16
PDLIM5-201ENST00000317968 DUSP19Q8WTR2 217 aa7.83□□□□□ -1.16
PDLIM5-201ENST00000317968 HPS1Q92902 700 aa7.83□□□□□ -1.16
PDLIM5-201ENST00000317968 BORCS5Q969J3 196 aa7.83□□□□□ -1.16
PDLIM5-201ENST00000317968 NUDT9Q9BW91 350 aa7.83□□□□□ -1.16
PDLIM5-201ENST00000317968 J3QLW9 94 aa7.83□□□□□ -1.16
PDLIM5-201ENST00000317968 IGF2P01344 180 aa7.83□□□□□ -1.16
PDLIM5-201ENST00000317968 ZNF19P17023 458 aa7.83□□□□□ -1.16
PDLIM5-201ENST00000317968 ARR3P36575 388 aa7.83□□□□□ -1.16
PDLIM5-201ENST00000317968 SRP14P37108 136 aaKnown RBP7.83□□□□□ -1.16
PDLIM5-201ENST00000317968 GNG2P59768 71 aa7.83□□□□□ -1.16
PDLIM5-201ENST00000317968 ISL1P61371 349 aa7.83□□□□□ -1.16
PDLIM5-201ENST00000317968 PRKCDQ05655 676 aa7.83□□□□□ -1.16
PDLIM5-201ENST00000317968 SLC6A19Q695T7 634 aa7.83□□□□□ -1.16
PDLIM5-201ENST00000317968 GALNTL5Q7Z4T8 443 aa7.83□□□□□ -1.16
PDLIM5-201ENST00000317968 LSMEM1Q8N8F7 131 aa7.83□□□□□ -1.16
PDLIM5-201ENST00000317968 SPACA9Q96E40 222 aaPredicted RBP7.83□□□□□ -1.16
PDLIM5-201ENST00000317968 SAMD8Q96LT4 415 aa7.83□□□□□ -1.16
PDLIM5-201ENST00000317968 C14orf166Q9Y224 244 aaKnown RBP7.83□□□□□ -1.16
PDLIM5-201ENST00000317968 RASD1Q9Y272 281 aa7.83□□□□□ -1.16
PDLIM5-201ENST00000317968 CBR3O75828 277 aa7.82□□□□□ -1.16
PDLIM5-201ENST00000317968 CD14P08571 375 aa7.82□□□□□ -1.16
PDLIM5-201ENST00000317968 FOXK2Q01167 660 aa7.82□□□□□ -1.16
PDLIM5-201ENST00000317968 TRIM16LQ309B1 348 aa7.82□□□□□ -1.16
PDLIM5-201ENST00000317968 PERM1Q5SV97 790 aa7.82□□□□□ -1.16
PDLIM5-201ENST00000317968 SPATC1Q76KD6 591 aa7.82□□□□□ -1.16
PDLIM5-201ENST00000317968 PRR7Q8TB68 274 aa7.82□□□□□ -1.16
PDLIM5-201ENST00000317968 CT55Q8WUE5 264 aa7.82□□□□□ -1.16
PDLIM5-201ENST00000317968 AKAP1Q92667 903 aaKnown RBP eCLIP7.82□□□□□ -1.16
PDLIM5-201ENST00000317968 RND1Q92730 232 aa7.82□□□□□ -1.16
PDLIM5-201ENST00000317968 ZC3HAV1LQ96H79 300 aaKnown RBP7.82□□□□□ -1.16
PDLIM5-201ENST00000317968 ESRP2Q9H6T0 727 aaKnown RBP7.82□□□□□ -1.16
PDLIM5-201ENST00000317968 DNAJC27Q9NZQ0 273 aa7.82□□□□□ -1.16
PDLIM5-201ENST00000317968 FBXL4Q9UKA2 621 aa7.82□□□□□ -1.16
PDLIM5-201ENST00000317968 M0R129 80 aa7.82□□□□□ -1.16
PDLIM5-201ENST00000317968 OR7A10O76100 309 aa7.82□□□□□ -1.16
PDLIM5-201ENST00000317968 ROR2Q01974 943 aaKnown RBP7.82□□□□□ -1.16
PDLIM5-201ENST00000317968 SELENBP1Q13228 472 aa7.82□□□□□ -1.16
PDLIM5-201ENST00000317968 PRSS41Q7RTY9 318 aa7.82□□□□□ -1.16
PDLIM5-201ENST00000317968 WFDC8Q8IUA0 241 aa7.82□□□□□ -1.16
PDLIM5-201ENST00000317968 KCTD7Q96MP8 289 aa7.82□□□□□ -1.16
PDLIM5-201ENST00000317968 TBX5Q99593 518 aa7.82□□□□□ -1.16
PDLIM5-201ENST00000317968 ING4Q9UNL4 249 aa7.82□□□□□ -1.16
PDLIM5-201ENST00000317968 PCM1Q15154 2024 aa7.82□□□□□ -1.16
PDLIM5-201ENST00000317968 IGLV3-12A0A075B6K2 115 aa7.82□□□□□ -1.16
PDLIM5-201ENST00000317968 FRS3O43559 492 aa7.82□□□□□ -1.16
PDLIM5-201ENST00000317968 GLCEO94923 617 aa7.82□□□□□ -1.16
PDLIM5-201ENST00000317968 CRYAAP02489 173 aa7.82□□□□□ -1.16
PDLIM5-201ENST00000317968 CLDN17P56750 224 aa7.82□□□□□ -1.16
PDLIM5-201ENST00000317968 PWWP2BQ6NUJ5 590 aa7.82□□□□□ -1.16
PDLIM5-201ENST00000317968 VHLLQ6RSH7 139 aa7.82□□□□□ -1.16
PDLIM5-201ENST00000317968 LRRN1Q6UXK5 716 aa7.82□□□□□ -1.16
PDLIM5-201ENST00000317968 S100A7AQ86SG5 101 aa7.82□□□□□ -1.16
PDLIM5-201ENST00000317968 PIAS4Q8N2W9 510 aaPredicted RBP7.82□□□□□ -1.16
PDLIM5-201ENST00000317968 TMEM105Q8N8V8 129 aa7.82□□□□□ -1.16
PDLIM5-201ENST00000317968 MCFD2Q8NI22 146 aa7.82□□□□□ -1.16
PDLIM5-201ENST00000317968 CNIH3Q8TBE1 160 aa7.82□□□□□ -1.16
PDLIM5-201ENST00000317968 KLHL15Q96M94 604 aa7.82□□□□□ -1.16
PDLIM5-201ENST00000317968 GINS4Q9BRT9 223 aa7.82□□□□□ -1.16
PDLIM5-201ENST00000317968 POTEKPQ9BYX7 375 aa7.82□□□□□ -1.16
PDLIM5-201ENST00000317968 NELFAQ9H3P2 528 aa7.82□□□□□ -1.16
PDLIM5-201ENST00000317968 DUSP21Q9H596 190 aa7.82□□□□□ -1.16
PDLIM5-201ENST00000317968 ISYNA1Q9NPH2 558 aa7.82□□□□□ -1.16
PDLIM5-201ENST00000317968 UBAP1Q9NZ09 502 aa7.82□□□□□ -1.16
PDLIM5-201ENST00000317968 GRIP1Q9Y3R0 1128 aa7.82□□□□□ -1.16
PDLIM5-201ENST00000317968 HSPB2A8KAH6 182 aa7.82□□□□□ -1.16
PDLIM5-201ENST00000317968 PAHP00439 452 aa7.82□□□□□ -1.16
PDLIM5-201ENST00000317968 GKN3PP0CG01 181 aa7.82□□□□□ -1.16
PDLIM5-201ENST00000317968 TACR3P29371 465 aa7.82□□□□□ -1.16
PDLIM5-201ENST00000317968 SNRPD2P62316 118 aaKnown RBP7.82□□□□□ -1.16
PDLIM5-201ENST00000317968 HSPB2Q16082 182 aa7.82□□□□□ -1.16
PDLIM5-201ENST00000317968 ISXQ2M1V0 245 aa7.82□□□□□ -1.16
PDLIM5-201ENST00000317968 ZNF620Q6ZNG0 422 aa7.82□□□□□ -1.16
PDLIM5-201ENST00000317968 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.82□□□□□ -1.16
PDLIM5-201ENST00000317968 GPR32P1Q8NGA4 272 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms